RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 LARSQ9P2J5 1176 aaKnown RBP3.69□□□□□ -1.82
SCFD1-207ENST00000544052 C11orf21Q9P2W6 132 aa3.69□□□□□ -1.82
SCFD1-207ENST00000544052 TSPYL4Q9UJ04 414 aa3.69□□□□□ -1.82
SCFD1-207ENST00000544052 PTGDR2Q9Y5Y4 395 aa3.69□□□□□ -1.82
SCFD1-207ENST00000544052 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.69□□□□□ -1.82
SCFD1-207ENST00000544052 BCL9LQ86UU0 1499 aa3.69□□□□□ -1.82
SCFD1-207ENST00000544052 CCDC144AA2RUR9 1427 aa3.69□□□□□ -1.82
SCFD1-207ENST00000544052 ATRNO75882 1429 aa3.69□□□□□ -1.82
SCFD1-207ENST00000544052 YTHDC2Q9H6S0 1430 aaKnown RBP3.69□□□□□ -1.82
SCFD1-207ENST00000544052 KANSL1LA0AUZ9 987 aa3.69□□□□□ -1.82
SCFD1-207ENST00000544052 MAP2K7O14733 419 aa3.69□□□□□ -1.82
SCFD1-207ENST00000544052 WNT9BO14905 357 aa3.69□□□□□ -1.82
SCFD1-207ENST00000544052 RGS14O43566 566 aa3.69□□□□□ -1.82
SCFD1-207ENST00000544052 RPL3P39023 403 aaKnown RBP3.69□□□□□ -1.82
SCFD1-207ENST00000544052 MXI1P50539 228 aa3.69□□□□□ -1.82
SCFD1-207ENST00000544052 CCR3P51677 355 aa3.69□□□□□ -1.82
SCFD1-207ENST00000544052 INHBEP58166 350 aa3.69□□□□□ -1.82
SCFD1-207ENST00000544052 SSBP2P81877 361 aaPredicted RBP3.69□□□□□ -1.82
SCFD1-207ENST00000544052 KLF9Q13886 244 aaPredicted RBP3.69□□□□□ -1.82
SCFD1-207ENST00000544052 SMN1Q16637 294 aaKnown RBP3.69□□□□□ -1.82
SCFD1-207ENST00000544052 CRY2Q49AN0 593 aa3.69□□□□□ -1.82
SCFD1-207ENST00000544052 DAB2IPQ5VWQ8 1189 aa3.69□□□□□ -1.82
SCFD1-207ENST00000544052 MORN5Q5VZ52 161 aa3.69□□□□□ -1.82
SCFD1-207ENST00000544052 KRT80Q6KB66 452 aa3.69□□□□□ -1.82
SCFD1-207ENST00000544052 HAUS6Q7Z4H7 955 aa3.69□□□□□ -1.82
SCFD1-207ENST00000544052 NRROSQ86YC3 692 aa3.69□□□□□ -1.82
SCFD1-207ENST00000544052 EPHX4Q8IUS5 362 aa3.69□□□□□ -1.82
SCFD1-207ENST00000544052 ZFAND2BQ8WV99 257 aa3.69□□□□□ -1.82
SCFD1-207ENST00000544052 NLRP4Q96MN2 994 aa3.69□□□□□ -1.82
SCFD1-207ENST00000544052 KCNK15Q9H427 330 aa3.69□□□□□ -1.82
SCFD1-207ENST00000544052 NOX4Q9NPH5 578 aa3.69□□□□□ -1.82
SCFD1-207ENST00000544052 AMACRQ9UHK6 382 aa3.69□□□□□ -1.82
SCFD1-207ENST00000544052 DBNLQ9UJU6 430 aaKnown RBP3.69□□□□□ -1.82
SCFD1-207ENST00000544052 PADI3Q9ULW8 664 aa3.69□□□□□ -1.82
SCFD1-207ENST00000544052 BTBD3Q9Y2F9 522 aa3.69□□□□□ -1.82
SCFD1-207ENST00000544052 FRMD4BQ9Y2L6 1034 aa3.69□□□□□ -1.82
SCFD1-207ENST00000544052 WBP11Q9Y2W2 641 aaKnown RBP3.69□□□□□ -1.82
SCFD1-207ENST00000544052 LRPPRCP42704 1394 aaKnown RBP3.69□□□□□ -1.82
SCFD1-207ENST00000544052 SLIT2O94813 1529 aa3.68□□□□□ -1.82
SCFD1-207ENST00000544052 DLC1Q96QB1 1528 aa3.68□□□□□ -1.82
SCFD1-207ENST00000544052 ABCC11Q96J66 1382 aa3.68□□□□□ -1.82
SCFD1-207ENST00000544052 hDV102S1A0JD36 115 aa3.68□□□□□ -1.82
SCFD1-207ENST00000544052 SOCS6O14544 535 aa3.68□□□□□ -1.82
SCFD1-207ENST00000544052 TNFRSF13BO14836 293 aaPredicted RBP3.68□□□□□ -1.82
SCFD1-207ENST00000544052 DDNO94850 711 aaPredicted RBP3.68□□□□□ -1.82
SCFD1-207ENST00000544052 GH2P01242 217 aa3.68□□□□□ -1.82
SCFD1-207ENST00000544052 DDX5P17844 614 aaKnown RBP3.68□□□□□ -1.82
SCFD1-207ENST00000544052 LMO1P25800 156 aa3.68□□□□□ -1.82
SCFD1-207ENST00000544052 STX2P32856 288 aa3.68□□□□□ -1.82
SCFD1-207ENST00000544052 MATR3P43243 847 aaKnown RBP eCLIP3.68□□□□□ -1.821e-6■■■□□ 19
SCFD1-207ENST00000544052 CSE1LP55060 971 aaKnown RBP3.68□□□□□ -1.82
SCFD1-207ENST00000544052 CSNK2A1P68400 391 aaPredicted RBP3.68□□□□□ -1.82
SCFD1-207ENST00000544052 SRSF1Q07955 248 aaKnown RBP eCLIP3.68□□□□□ -1.82
SCFD1-207ENST00000544052 COG2Q14746 738 aa3.68□□□□□ -1.82
SCFD1-207ENST00000544052 EZH2Q15910 746 aaKnown RBP3.68□□□□□ -1.82
SCFD1-207ENST00000544052 FNBP1LQ5T0N5 605 aa3.68□□□□□ -1.82
SCFD1-207ENST00000544052 TYW3Q6IPR3 259 aaKnown RBP3.68□□□□□ -1.82
SCFD1-207ENST00000544052 SUSD1Q6UWL2 747 aa3.68□□□□□ -1.82
SCFD1-207ENST00000544052 ATG9AQ7Z3C6 839 aa3.68□□□□□ -1.82
SCFD1-207ENST00000544052 CEP57Q86XR8 500 aa3.68□□□□□ -1.82
SCFD1-207ENST00000544052 ZNF595Q8IYB9 648 aa3.68□□□□□ -1.82
SCFD1-207ENST00000544052 PCDH20Q8N6Y1 951 aaKnown RBP3.68□□□□□ -1.82
SCFD1-207ENST00000544052 CSNK2A3Q8NEV1 391 aa3.68□□□□□ -1.82
SCFD1-207ENST00000544052 MPLKIPQ8TAP9 179 aa3.68□□□□□ -1.82
SCFD1-207ENST00000544052 TAS1R2Q8TE23 839 aa3.68□□□□□ -1.82
SCFD1-207ENST00000544052 SIPA1Q96FS4 1042 aa3.68□□□□□ -1.82
SCFD1-207ENST00000544052 ZNF830Q96NB3 372 aaPredicted RBP3.68□□□□□ -1.82
SCFD1-207ENST00000544052 PCYT2Q99447 389 aa3.68□□□□□ -1.82
SCFD1-207ENST00000544052 GFI1Q99684 422 aa3.68□□□□□ -1.82
SCFD1-207ENST00000544052 CMKLR1Q99788 373 aa3.68□□□□□ -1.82
SCFD1-207ENST00000544052 ADPGKQ9BRR6 497 aa3.68□□□□□ -1.82
SCFD1-207ENST00000544052 HGH1Q9BTY7 390 aa3.68□□□□□ -1.82
SCFD1-207ENST00000544052 EDEM3Q9BZQ6 932 aa3.68□□□□□ -1.82
SCFD1-207ENST00000544052 GPR88Q9GZN0 384 aa3.68□□□□□ -1.82
SCFD1-207ENST00000544052 MMP27Q9H306 513 aa3.68□□□□□ -1.82
SCFD1-207ENST00000544052 EBF3Q9H4W6 596 aa3.68□□□□□ -1.82
SCFD1-207ENST00000544052 MAGIXQ9H6Y5 334 aa3.68□□□□□ -1.82
SCFD1-207ENST00000544052 GRPEL1Q9HAV7 217 aa3.68□□□□□ -1.82
SCFD1-207ENST00000544052 PAM16Q9Y3D7 125 aa3.68□□□□□ -1.82
SCFD1-207ENST00000544052 ITSN1Q15811 1721 aa3.68□□□□□ -1.82
SCFD1-207ENST00000544052 TNS1Q9HBL0 1735 aaKnown RBP3.68□□□□□ -1.82
SCFD1-207ENST00000544052 SOS1Q07889 1333 aaPredicted RBP3.68□□□□□ -1.82
SCFD1-207ENST00000544052 RPGRIP1LQ68CZ1 1315 aa3.68□□□□□ -1.82
SCFD1-207ENST00000544052 RAB3GAP2Q9H2M9 1393 aa3.68□□□□□ -1.82
SCFD1-207ENST00000544052 TMEM8BA6NDV4 472 aa3.67□□□□□ -1.82
SCFD1-207ENST00000544052 INAFM1C9JVW0 142 aa3.67□□□□□ -1.82
SCFD1-207ENST00000544052 TBCAO75347 108 aaKnown RBP3.67□□□□□ -1.82
SCFD1-207ENST00000544052 CREG1O75629 220 aa3.67□□□□□ -1.82
SCFD1-207ENST00000544052 SYF2O95926 243 aaKnown RBP3.67□□□□□ -1.82
SCFD1-207ENST00000544052 QDPRP09417 244 aa3.67□□□□□ -1.82
SCFD1-207ENST00000544052 CCDC175P0C221 793 aa3.67□□□□□ -1.82
SCFD1-207ENST00000544052 HOXB2P14652 356 aa3.67□□□□□ -1.82
SCFD1-207ENST00000544052 FOXM1Q08050 763 aa3.67□□□□□ -1.82
SCFD1-207ENST00000544052 GPS2Q13227 327 aa3.67□□□□□ -1.82
SCFD1-207ENST00000544052 SNAPC1Q16533 368 aa3.67□□□□□ -1.82
SCFD1-207ENST00000544052 ATP13A5Q4VNC0 1218 aa3.67□□□□□ -1.82
SCFD1-207ENST00000544052 FSCBQ5H9T9 825 aa3.67□□□□□ -1.82
SCFD1-207ENST00000544052 LCN10Q6JVE6 187 aa3.67□□□□□ -1.82
SCFD1-207ENST00000544052 COLCA1Q6ZS62 124 aa3.67□□□□□ -1.82
SCFD1-207ENST00000544052 INTS8Q75QN2 995 aaKnown RBP3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms