RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 NAT9Q9BTE0 207 aa16.47■□□□□ 0.23
UBC-208ENST00000540700 ERVMER34-1Q9H9K5 563 aa16.47■□□□□ 0.23
UBC-208ENST00000540700 LRRC4CQ9HCJ2 640 aa16.47■□□□□ 0.23
UBC-208ENST00000540700 C20orf96Q9NUD7 363 aaPredicted RBP16.47■□□□□ 0.23
UBC-208ENST00000540700 ZDHHC3Q9NYG2 299 aa16.47■□□□□ 0.23
UBC-208ENST00000540700 MOCS1Q9NZB8 636 aa16.47■□□□□ 0.23
UBC-208ENST00000540700 KLQ9UEF7 1012 aa16.47■□□□□ 0.23
UBC-208ENST00000540700 AK5Q9Y6K8 562 aa16.47■□□□□ 0.23
UBC-208ENST00000540700 MGAQ8IWI9 3026 aa16.47■□□□□ 0.23
UBC-208ENST00000540700 TLX3O43711 291 aaPredicted RBP16.46■□□□□ 0.23
UBC-208ENST00000540700 NUAK1O60285 661 aa16.46■□□□□ 0.23
UBC-208ENST00000540700 SDC3O75056 442 aa16.46■□□□□ 0.23
UBC-208ENST00000540700 ASMTLO95671 621 aa16.46■□□□□ 0.23
UBC-208ENST00000540700 CSF2P04141 144 aa16.46■□□□□ 0.23
UBC-208ENST00000540700 IVLP07476 585 aa16.46■□□□□ 0.23
UBC-208ENST00000540700 HTR1BP28222 390 aa16.46■□□□□ 0.23
UBC-208ENST00000540700 MPP1Q00013 466 aa16.46■□□□□ 0.23
UBC-208ENST00000540700 BNIP3Q12983 259 aa16.46■□□□□ 0.23
UBC-208ENST00000540700 PTK2BQ14289 1009 aa16.46■□□□□ 0.23
UBC-208ENST00000540700 TYSND1Q2T9J0 566 aa16.46■□□□□ 0.23
UBC-208ENST00000540700 FASTKD1Q53R41 847 aaKnown RBP16.46■□□□□ 0.23
UBC-208ENST00000540700 LDLRAP1Q5SW96 308 aa16.46■□□□□ 0.23
UBC-208ENST00000540700 NEPROQ6NW34 567 aa16.46■□□□□ 0.23
UBC-208ENST00000540700 DET1Q7L5Y6 550 aa16.46■□□□□ 0.23
UBC-208ENST00000540700 KCNMB4Q86W47 210 aa16.46■□□□□ 0.23
UBC-208ENST00000540700 RELL1Q8IUW5 271 aa16.46■□□□□ 0.23
UBC-208ENST00000540700 CCNJLQ8IV13 435 aa16.46■□□□□ 0.23
UBC-208ENST00000540700 HID1Q8IV36 788 aa16.46■□□□□ 0.23
UBC-208ENST00000540700 PHACTR4Q8IZ21 702 aa16.46■□□□□ 0.23
UBC-208ENST00000540700 GPR150Q8NGU9 434 aa16.46■□□□□ 0.23
UBC-208ENST00000540700 CCL4L1Q8NHW4 92 aa16.46■□□□□ 0.23
UBC-208ENST00000540700 GDAP1Q8TB36 358 aa16.46■□□□□ 0.23
UBC-208ENST00000540700 UBXN4Q92575 508 aa16.46■□□□□ 0.23
UBC-208ENST00000540700 ULK4Q96C45 1275 aa16.46■□□□□ 0.23
UBC-208ENST00000540700 CERS2Q96G23 380 aa16.46■□□□□ 0.23
UBC-208ENST00000540700 ELF4Q99607 663 aaPredicted RBP16.46■□□□□ 0.23
UBC-208ENST00000540700 CDC42EP4Q9H3Q1 356 aaKnown RBP16.46■□□□□ 0.23
UBC-208ENST00000540700 CYP4F12Q9HCS2 524 aa16.46■□□□□ 0.23
UBC-208ENST00000540700 IARS2Q9NSE4 1012 aaKnown RBP16.46■□□□□ 0.23
UBC-208ENST00000540700 UCKL1Q9NWZ5 548 aa16.46■□□□□ 0.23
UBC-208ENST00000540700 DNAJC28Q9NX36 388 aa16.46■□□□□ 0.23
UBC-208ENST00000540700 MTRF1LQ9UGC7 380 aaKnown RBP16.46■□□□□ 0.23
UBC-208ENST00000540700 A0A1B0GTQ1 180 aa16.45■□□□□ 0.22
UBC-208ENST00000540700 CXorf49A8MYA2 514 aaPredicted RBP16.45■□□□□ 0.22
UBC-208ENST00000540700 TNFRSF10CO14798 259 aa16.45■□□□□ 0.22
UBC-208ENST00000540700 CHUKO15111 745 aa16.45■□□□□ 0.22
UBC-208ENST00000540700 PCDHGA12O60330 932 aa16.45■□□□□ 0.22
UBC-208ENST00000540700 MAGEC1O60732 1142 aa16.45■□□□□ 0.22
UBC-208ENST00000540700 NME1P15531 152 aaKnown RBP16.45■□□□□ 0.22
UBC-208ENST00000540700 PAMP19021 973 aa16.45■□□□□ 0.22
UBC-208ENST00000540700 GABRB3P28472 473 aa16.45■□□□□ 0.22
UBC-208ENST00000540700 SLC1A2P43004 574 aa16.45■□□□□ 0.22
UBC-208ENST00000540700 GNPDA1P46926 289 aa16.45■□□□□ 0.22
UBC-208ENST00000540700 RXRGP48443 463 aa16.45■□□□□ 0.22
UBC-208ENST00000540700 HK3P52790 923 aa16.45■□□□□ 0.22
UBC-208ENST00000540700 CTBP1Q13363 440 aa16.45■□□□□ 0.22
UBC-208ENST00000540700 FRG1Q14331 258 aaKnown RBP16.45■□□□□ 0.22
UBC-208ENST00000540700 KYNUQ16719 465 aa16.45■□□□□ 0.22
UBC-208ENST00000540700 PYCR3Q53H96 274 aa16.45■□□□□ 0.22
UBC-208ENST00000540700 ZNF470Q6ECI4 717 aa16.45■□□□□ 0.22
UBC-208ENST00000540700 KANSL1Q7Z3B3 1105 aa16.45■□□□□ 0.22
UBC-208ENST00000540700 RD3Q7Z3Z2 195 aa16.45■□□□□ 0.22
UBC-208ENST00000540700 C11orf96Q7Z7L8 435 aa16.45■□□□□ 0.22
UBC-208ENST00000540700 GATAD2AQ86YP4 633 aa16.45■□□□□ 0.22
UBC-208ENST00000540700 CILP2Q8IUL8 1156 aa16.45■□□□□ 0.22
UBC-208ENST00000540700 CNTN4Q8IWV2 1026 aa16.45■□□□□ 0.22
UBC-208ENST00000540700 ZNF843Q8N446 348 aa16.45■□□□□ 0.22
UBC-208ENST00000540700 CLDN19Q8N6F1 224 aa16.45■□□□□ 0.22
UBC-208ENST00000540700 BEND7Q8N7W2 519 aaPredicted RBP16.45■□□□□ 0.22
UBC-208ENST00000540700 GSDMBQ8TAX9 411 aa16.45■□□□□ 0.22
UBC-208ENST00000540700 LKAAEAR1Q8TD35 194 aa16.45■□□□□ 0.22
UBC-208ENST00000540700 SKA1Q96BD8 255 aa16.45■□□□□ 0.22
UBC-208ENST00000540700 SGF29Q96ES7 293 aa16.45■□□□□ 0.22
UBC-208ENST00000540700 COPS8Q99627 209 aa16.45■□□□□ 0.22
UBC-208ENST00000540700 LRRC61Q9BV99 259 aa16.45■□□□□ 0.22
UBC-208ENST00000540700 CLPBQ9H078 707 aa16.45■□□□□ 0.22
UBC-208ENST00000540700 TMEM168Q9H0V1 697 aa16.45■□□□□ 0.22
UBC-208ENST00000540700 EPB41L4BQ9H329 900 aa16.45■□□□□ 0.22
UBC-208ENST00000540700 CARS2Q9HA77 564 aaKnown RBP16.45■□□□□ 0.22
UBC-208ENST00000540700 VPS18Q9P253 973 aa16.45■□□□□ 0.22
UBC-208ENST00000540700 SLC23A2Q9UGH3 650 aa16.45■□□□□ 0.22
UBC-208ENST00000540700 MOSPD1Q9UJG1 213 aa16.45■□□□□ 0.22
UBC-208ENST00000540700 DGKBQ9Y6T7 804 aa16.45■□□□□ 0.22
UBC-208ENST00000540700 MYO18BQ8IUG5 2567 aa16.45■□□□□ 0.22
UBC-208ENST00000540700 TCRBV9S1A1TA0A576 114 aa16.44■□□□□ 0.22
UBC-208ENST00000540700 RRP8O43159 456 aaKnown RBP16.44■□□□□ 0.22
UBC-208ENST00000540700 VEGFDO43915 354 aa16.44■□□□□ 0.22
UBC-208ENST00000540700 CDK14O94921 469 aa16.44■□□□□ 0.22
UBC-208ENST00000540700 JUNDP17535 347 aa16.44■□□□□ 0.22
UBC-208ENST00000540700 MSH3P20585 1137 aa16.44■□□□□ 0.22
UBC-208ENST00000540700 KELP23276 732 aa16.44■□□□□ 0.22
UBC-208ENST00000540700 AKT1P31749 480 aa16.44■□□□□ 0.22
UBC-208ENST00000540700 PPARDQ03181 441 aa16.44■□□□□ 0.22
UBC-208ENST00000540700 DNAJC3Q13217 504 aa16.44■□□□□ 0.22
UBC-208ENST00000540700 C1orf61Q13536 156 aa16.44■□□□□ 0.22
UBC-208ENST00000540700 ITIH4Q14624 930 aa16.44■□□□□ 0.22
UBC-208ENST00000540700 EFTUD2Q15029 972 aaKnown RBP eCLIP16.44■□□□□ 0.223e-15■■■□□ 15.4
UBC-208ENST00000540700 INAVAQ3KP66 663 aa16.44■□□□□ 0.22
UBC-208ENST00000540700 TEDDM1Q5T9Z0 273 aa16.44■□□□□ 0.22
UBC-208ENST00000540700 WDR93Q6P2C0 686 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms