RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 IL18RAPO95256 599 aa10.96□□□□□ -0.65
PBX1-212ENST00000540236 CCNDBP1O95273 360 aa10.96□□□□□ -0.65
PBX1-212ENST00000540236 IFNA7P01567 189 aa10.96□□□□□ -0.65
PBX1-212ENST00000540236 CKMT1AP12532 417 aa10.96□□□□□ -0.65
PBX1-212ENST00000540236 SMN1Q16637 294 aaKnown RBP10.96□□□□□ -0.65
PBX1-212ENST00000540236 PLEKHG6Q3KR16 790 aa10.96□□□□□ -0.65
PBX1-212ENST00000540236 RNF157Q96PX1 679 aa10.96□□□□□ -0.65
PBX1-212ENST00000540236 FRMD8P1Q9BZ68 369 aaPredicted RBP10.96□□□□□ -0.65
PBX1-212ENST00000540236 LRRC4Q9HBW1 653 aa10.96□□□□□ -0.65
PBX1-212ENST00000540236 CD320Q9NPF0 282 aa10.96□□□□□ -0.65
PBX1-212ENST00000540236 ATP13A2Q9NQ11 1180 aa10.96□□□□□ -0.65
PBX1-212ENST00000540236 FARP1Q9Y4F1 1045 aaPredicted RBP10.96□□□□□ -0.65
PBX1-212ENST00000540236 TUBGCP6Q96RT7 1819 aa10.96□□□□□ -0.65
PBX1-212ENST00000540236 ATRNL1Q5VV63 1379 aa10.96□□□□□ -0.65
PBX1-212ENST00000540236 CASKO14936 926 aa10.96□□□□□ -0.65
PBX1-212ENST00000540236 EMX1Q04741 257 aaPredicted RBP10.96□□□□□ -0.65
PBX1-212ENST00000540236 DEF8Q6ZN54 512 aa10.96□□□□□ -0.65
PBX1-212ENST00000540236 FGD2Q7Z6J4 655 aa10.96□□□□□ -0.65
PBX1-212ENST00000540236 ESX1Q8N693 406 aa10.96□□□□□ -0.65
PBX1-212ENST00000540236 GPR151Q8TDV0 419 aa10.96□□□□□ -0.65
PBX1-212ENST00000540236 TXNDC15Q96J42 360 aa10.96□□□□□ -0.65
PBX1-212ENST00000540236 CDK15Q96Q40 435 aa10.96□□□□□ -0.65
PBX1-212ENST00000540236 PLA2G12BQ9BX93 195 aa10.96□□□□□ -0.65
PBX1-212ENST00000540236 VRTNQ9H8Y1 702 aa10.96□□□□□ -0.65
PBX1-212ENST00000540236 WRAP73Q9P2S5 460 aaPredicted RBP10.96□□□□□ -0.65
PBX1-212ENST00000540236 NLKQ9UBE8 527 aa10.96□□□□□ -0.65
PBX1-212ENST00000540236 ANKRD6Q9Y2G4 727 aa10.96□□□□□ -0.65
PBX1-212ENST00000540236 TNS3Q68CZ2 1445 aa10.96□□□□□ -0.66
PBX1-212ENST00000540236 MID1O15344 667 aa10.96□□□□□ -0.66
PBX1-212ENST00000540236 MTA2O94776 668 aa10.96□□□□□ -0.66
PBX1-212ENST00000540236 SOAT1P35610 550 aa10.96□□□□□ -0.66
PBX1-212ENST00000540236 POLR2JP52435 117 aaKnown RBP10.96□□□□□ -0.66
PBX1-212ENST00000540236 ARSFP54793 590 aa10.96□□□□□ -0.66
PBX1-212ENST00000540236 HADHBP55084 474 aaKnown RBP10.96□□□□□ -0.66
PBX1-212ENST00000540236 OLR1P78380 273 aa10.96□□□□□ -0.66
PBX1-212ENST00000540236 KCNAB2Q13303 367 aa10.96□□□□□ -0.66
PBX1-212ENST00000540236 PPIL2Q13356 520 aa10.96□□□□□ -0.66
PBX1-212ENST00000540236 MXD4Q14582 209 aaPredicted RBP10.96□□□□□ -0.66
PBX1-212ENST00000540236 DUOXA2Q1HG44 320 aa10.96□□□□□ -0.66
PBX1-212ENST00000540236 SOWAHCQ53LP3 525 aaPredicted RBP10.96□□□□□ -0.66
PBX1-212ENST00000540236 OR5B17Q8NGF7 314 aa10.96□□□□□ -0.66
PBX1-212ENST00000540236 GTPBP3Q969Y2 492 aaKnown RBP10.96□□□□□ -0.66
PBX1-212ENST00000540236 RBCK1Q9BYM8 510 aa10.96□□□□□ -0.66
PBX1-212ENST00000540236 SMURF1Q9HCE7 757 aa10.96□□□□□ -0.66
PBX1-212ENST00000540236 KCTD5Q9NXV2 234 aa10.96□□□□□ -0.66
PBX1-212ENST00000540236 MORF4L1Q9UBU8 362 aa10.96□□□□□ -0.66
PBX1-212ENST00000540236 AKT3Q9Y243 479 aa10.96□□□□□ -0.66
PBX1-212ENST00000540236 SCAMP3O14828 347 aaKnown RBP10.96□□□□□ -0.66
PBX1-212ENST00000540236 LRCH4O75427 683 aa10.96□□□□□ -0.66
PBX1-212ENST00000540236 CDRT1O95170 752 aa10.96□□□□□ -0.66
PBX1-212ENST00000540236 UNGP13051 313 aaPredicted RBP10.96□□□□□ -0.66
PBX1-212ENST00000540236 LBPP18428 481 aa10.96□□□□□ -0.66
PBX1-212ENST00000540236 ETV1P50549 477 aa10.96□□□□□ -0.66
PBX1-212ENST00000540236 ALDH3A2P51648 485 aa10.96□□□□□ -0.66
PBX1-212ENST00000540236 RAB10P61026 200 aa10.96□□□□□ -0.66
PBX1-212ENST00000540236 FAPQ12884 760 aa10.96□□□□□ -0.66
PBX1-212ENST00000540236 PLD1Q13393 1074 aa10.96□□□□□ -0.66
PBX1-212ENST00000540236 CDH18Q13634 790 aa10.96□□□□□ -0.66
PBX1-212ENST00000540236 HAGHLQ6PII5 290 aaPredicted RBP10.96□□□□□ -0.66
PBX1-212ENST00000540236 TRIM69Q86WT6 500 aa10.96□□□□□ -0.66
PBX1-212ENST00000540236 C1GALT1C1Q96EU7 318 aa10.96□□□□□ -0.66
PBX1-212ENST00000540236 RNFT2Q96EX2 444 aa10.96□□□□□ -0.66
PBX1-212ENST00000540236 CSF3RQ99062 836 aa10.96□□□□□ -0.66
PBX1-212ENST00000540236 SNRNP25Q9BV90 132 aaKnown RBP10.96□□□□□ -0.66
PBX1-212ENST00000540236 TMPRSS4Q9NRS4 437 aa10.96□□□□□ -0.66
PBX1-212ENST00000540236 OXSMQ9NWU1 459 aa10.96□□□□□ -0.66
PBX1-212ENST00000540236 CNOT11Q9UKZ1 510 aaKnown RBP10.96□□□□□ -0.66
PBX1-212ENST00000540236 CLTCQ00610 1675 aaKnown RBP10.95□□□□□ -0.66
PBX1-212ENST00000540236 TO15178 435 aa10.95□□□□□ -0.66
PBX1-212ENST00000540236 KIAA0513O60268 411 aa10.95□□□□□ -0.66
PBX1-212ENST00000540236 GRM5P41594 1212 aa10.95□□□□□ -0.66
PBX1-212ENST00000540236 CXorf57Q6NSI4 855 aaKnown RBP10.95□□□□□ -0.66
PBX1-212ENST00000540236 BBS12Q6ZW61 710 aa10.95□□□□□ -0.66
PBX1-212ENST00000540236 MOB2Q70IA6 237 aa10.95□□□□□ -0.66
PBX1-212ENST00000540236 NANPQ8TBE9 248 aa10.95□□□□□ -0.66
PBX1-212ENST00000540236 HEXDCQ8WVB3 486 aa10.95□□□□□ -0.66
PBX1-212ENST00000540236 CENPIQ92674 756 aaPredicted RBP10.95□□□□□ -0.66
PBX1-212ENST00000540236 RIOX1Q9H6W3 641 aa10.95□□□□□ -0.66
PBX1-212ENST00000540236 DBNDD1Q9H9R9 158 aa10.95□□□□□ -0.66
PBX1-212ENST00000540236 MAPRE3Q9UPY8 281 aa10.95□□□□□ -0.66
PBX1-212ENST00000540236 TXNL1O43396 289 aa10.95□□□□□ -0.66
PBX1-212ENST00000540236 SLITRK5O94991 958 aa10.95□□□□□ -0.66
PBX1-212ENST00000540236 SFNP31947 248 aa10.95□□□□□ -0.66
PBX1-212ENST00000540236 NUP62P37198 522 aaPredicted RBP10.95□□□□□ -0.66
PBX1-212ENST00000540236 ESCO2Q56NI9 601 aa10.95□□□□□ -0.66
PBX1-212ENST00000540236 HERVK_113Q902F9 699 aa10.95□□□□□ -0.66
PBX1-212ENST00000540236 MAGEB5Q9BZ81 275 aa10.95□□□□□ -0.66
PBX1-212ENST00000540236 NIF3L1Q9GZT8 377 aa10.95□□□□□ -0.66
PBX1-212ENST00000540236 AKTIPQ9H8T0 292 aa10.95□□□□□ -0.66
PBX1-212ENST00000540236 EMCNQ9ULC0 261 aa10.95□□□□□ -0.66
PBX1-212ENST00000540236 NT5C1B-RDH14C9J2C7 533 aa10.95□□□□□ -0.66
PBX1-212ENST00000540236 H7C2Y5 167 aa10.95□□□□□ -0.66
PBX1-212ENST00000540236 TLL1O43897 1013 aa10.95□□□□□ -0.66
PBX1-212ENST00000540236 CYP2A7P20853 494 aa10.95□□□□□ -0.66
PBX1-212ENST00000540236 ACO1P21399 889 aaKnown RBP10.95□□□□□ -0.66
PBX1-212ENST00000540236 GSK3BP49841 420 aa10.95□□□□□ -0.66
PBX1-212ENST00000540236 SNTA1Q13424 505 aa10.95□□□□□ -0.66
PBX1-212ENST00000540236 IDO2Q6ZQW0 420 aa10.95□□□□□ -0.66
PBX1-212ENST00000540236 EPHX4Q8IUS5 362 aa10.95□□□□□ -0.66
PBX1-212ENST00000540236 EFHBQ8N7U6 833 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms