RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 DLEU7Q6UYE1 221 aa11.81□□□□□ -0.52
CPNE8-203ENST00000538596 DTWD1Q8N5C7 304 aa11.81□□□□□ -0.52
CPNE8-203ENST00000538596 DRAXINQ8NBI3 349 aaPredicted RBP11.81□□□□□ -0.52
CPNE8-203ENST00000538596 NPLQ9BXD5 320 aaPredicted RBP11.81□□□□□ -0.52
CPNE8-203ENST00000538596 NUSAP1Q9BXS6 441 aaKnown RBP11.81□□□□□ -0.52
CPNE8-203ENST00000538596 NAA50Q9GZZ1 169 aaKnown RBP11.81□□□□□ -0.52
CPNE8-203ENST00000538596 LTB4R2Q9NPC1 389 aa11.81□□□□□ -0.52
CPNE8-203ENST00000538596 SMPD3Q9NY59 655 aaPredicted RBP11.81□□□□□ -0.52
CPNE8-203ENST00000538596 DNMT3LQ9UJW3 386 aa11.81□□□□□ -0.52
CPNE8-203ENST00000538596 POLR3HQ9Y535 204 aaPredicted RBP11.81□□□□□ -0.52
CPNE8-203ENST00000538596 A0A0J9YVX5 310 aa11.81□□□□□ -0.52
CPNE8-203ENST00000538596 FAM234BA2RU67 622 aa11.81□□□□□ -0.52
CPNE8-203ENST00000538596 CD160O95971 181 aa11.81□□□□□ -0.52
CPNE8-203ENST00000538596 LDLRP01130 860 aa11.81□□□□□ -0.52
CPNE8-203ENST00000538596 SLC10A3P09131 477 aa11.81□□□□□ -0.52
CPNE8-203ENST00000538596 ALPIP09923 528 aa11.81□□□□□ -0.52
CPNE8-203ENST00000538596 TCF3P15923 654 aa11.81□□□□□ -0.52
CPNE8-203ENST00000538596 GGT5P36269 586 aa11.81□□□□□ -0.52
CPNE8-203ENST00000538596 TTPAP49638 278 aa11.81□□□□□ -0.52
CPNE8-203ENST00000538596 CLCN7P51798 805 aa11.81□□□□□ -0.52
CPNE8-203ENST00000538596 ABRAXAS2Q15018 415 aa11.81□□□□□ -0.52
CPNE8-203ENST00000538596 C5orf22Q49AR2 442 aa11.81□□□□□ -0.52
CPNE8-203ENST00000538596 PDCD4Q53EL6 469 aaKnown RBP11.81□□□□□ -0.52
CPNE8-203ENST00000538596 TXNDC11Q6PKC3 985 aa11.81□□□□□ -0.52
CPNE8-203ENST00000538596 ZFAND4Q86XD8 727 aa11.81□□□□□ -0.52
CPNE8-203ENST00000538596 ABI1Q8IZP0 508 aa11.81□□□□□ -0.52
CPNE8-203ENST00000538596 DHRSXQ8N5I4 330 aa11.81□□□□□ -0.52
CPNE8-203ENST00000538596 FAM86B1Q8N7N1 296 aa11.81□□□□□ -0.52
CPNE8-203ENST00000538596 OR4F6Q8NGB9 312 aa11.81□□□□□ -0.52
CPNE8-203ENST00000538596 OR6K2Q8NGY2 324 aa11.81□□□□□ -0.52
CPNE8-203ENST00000538596 ISG20Q96AZ6 181 aaKnown RBP11.81□□□□□ -0.52
CPNE8-203ENST00000538596 SEZ6LQ9BYH1 1024 aa11.81□□□□□ -0.52
CPNE8-203ENST00000538596 COMMD10Q9Y6G5 202 aa11.81□□□□□ -0.52
CPNE8-203ENST00000538596 H0Y858 1186 aa11.8□□□□□ -0.52
CPNE8-203ENST00000538596 OR7A17O14581 309 aa11.8□□□□□ -0.52
CPNE8-203ENST00000538596 COCHO43405 550 aa11.8□□□□□ -0.52
CPNE8-203ENST00000538596 ATE1O95260 518 aa11.8□□□□□ -0.52
CPNE8-203ENST00000538596 CORO1AP31146 461 aaKnown RBP11.8□□□□□ -0.52
CPNE8-203ENST00000538596 CAPGP40121 348 aa11.8□□□□□ -0.52
CPNE8-203ENST00000538596 GDF5P43026 501 aa11.8□□□□□ -0.52
CPNE8-203ENST00000538596 SLC11A2P49281 568 aa11.8□□□□□ -0.52
CPNE8-203ENST00000538596 ACLYP53396 1101 aa11.8□□□□□ -0.52
CPNE8-203ENST00000538596 EMX2Q04743 252 aa11.8□□□□□ -0.52
CPNE8-203ENST00000538596 PRKG2Q13237 762 aa11.8□□□□□ -0.52
CPNE8-203ENST00000538596 DCTN2Q13561 401 aaKnown RBP11.8□□□□□ -0.52
CPNE8-203ENST00000538596 NR6A1Q15406 480 aa11.8□□□□□ -0.52
CPNE8-203ENST00000538596 ATXN7L2Q5T6C5 722 aaPredicted RBP11.8□□□□□ -0.52
CPNE8-203ENST00000538596 GPR107Q5VW38 600 aa11.8□□□□□ -0.52
CPNE8-203ENST00000538596 FUT10Q6P4F1 479 aa11.8□□□□□ -0.52
CPNE8-203ENST00000538596 ZBTB46Q86UZ6 589 aa11.8□□□□□ -0.52
CPNE8-203ENST00000538596 ALDH16A1Q8IZ83 802 aa11.8□□□□□ -0.52
CPNE8-203ENST00000538596 TET1Q8NFU7 2136 aa11.8□□□□□ -0.52
CPNE8-203ENST00000538596 RNF217Q8TC41 542 aa11.8□□□□□ -0.52
CPNE8-203ENST00000538596 BCL7CQ8WUZ0 217 aaPredicted RBP11.8□□□□□ -0.52
CPNE8-203ENST00000538596 HSPBAP1Q96EW2 488 aa11.8□□□□□ -0.52
CPNE8-203ENST00000538596 SPATA17Q96L03 361 aa11.8□□□□□ -0.52
CPNE8-203ENST00000538596 BOCQ9BWV1 1114 aa11.8□□□□□ -0.52
CPNE8-203ENST00000538596 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.8□□□□□ -0.52
CPNE8-203ENST00000538596 CARS2Q9HA77 564 aaKnown RBP11.8□□□□□ -0.52
CPNE8-203ENST00000538596 NTN4Q9HB63 628 aa11.8□□□□□ -0.52
CPNE8-203ENST00000538596 TLR9Q9NR96 1032 aa11.8□□□□□ -0.52
CPNE8-203ENST00000538596 PCDHB9Q9Y5E1 797 aa11.8□□□□□ -0.52
CPNE8-203ENST00000538596 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.8□□□□□ -0.52
CPNE8-203ENST00000538596 TMEM88BA6NKF7 163 aa11.8□□□□□ -0.52
CPNE8-203ENST00000538596 FFAR3O14843 346 aa11.8□□□□□ -0.52
CPNE8-203ENST00000538596 GPR42O15529 346 aa11.8□□□□□ -0.52
CPNE8-203ENST00000538596 ELK4P28324 431 aa11.8□□□□□ -0.52
CPNE8-203ENST00000538596 IST1P53990 364 aa11.8□□□□□ -0.52
CPNE8-203ENST00000538596 FCGRTP55899 365 aa11.8□□□□□ -0.52
CPNE8-203ENST00000538596 EEFSECP57772 596 aaKnown RBP11.8□□□□□ -0.52
CPNE8-203ENST00000538596 ESRRGP62508 458 aa11.8□□□□□ -0.52
CPNE8-203ENST00000538596 ZNF177Q13360 481 aaPredicted RBP11.8□□□□□ -0.52
CPNE8-203ENST00000538596 PTGR1Q14914 329 aa11.8□□□□□ -0.52
CPNE8-203ENST00000538596 NEDD8Q15843 81 aa11.8□□□□□ -0.52
CPNE8-203ENST00000538596 ZBED5Q49AG3 693 aa11.8□□□□□ -0.52
CPNE8-203ENST00000538596 GOLGA7Q7Z5G4 137 aa11.8□□□□□ -0.52
CPNE8-203ENST00000538596 ITIH5Q86UX2 942 aa11.8□□□□□ -0.52
CPNE8-203ENST00000538596 GPR180Q86V85 440 aa11.8□□□□□ -0.52
CPNE8-203ENST00000538596 HID1Q8IV36 788 aa11.8□□□□□ -0.52
CPNE8-203ENST00000538596 TTC30BQ8N4P2 665 aa11.8□□□□□ -0.52
CPNE8-203ENST00000538596 CLDN19Q8N6F1 224 aa11.8□□□□□ -0.52
CPNE8-203ENST00000538596 TNIP2Q8NFZ5 429 aa11.8□□□□□ -0.52
CPNE8-203ENST00000538596 TSPEARQ8WU66 669 aa11.8□□□□□ -0.52
CPNE8-203ENST00000538596 ZNF382Q96SR6 550 aa11.8□□□□□ -0.52
CPNE8-203ENST00000538596 LRRC3Q9BY71 257 aa11.8□□□□□ -0.52
CPNE8-203ENST00000538596 RNF38Q9H0F5 515 aa11.8□□□□□ -0.52
CPNE8-203ENST00000538596 NSUN3Q9H649 340 aaKnown RBP11.8□□□□□ -0.52
CPNE8-203ENST00000538596 POLR1BQ9H9Y6 1135 aa11.8□□□□□ -0.52
CPNE8-203ENST00000538596 CXorf21Q9HAI6 301 aa11.8□□□□□ -0.52
CPNE8-203ENST00000538596 RIC8BQ9NVN3 520 aa11.8□□□□□ -0.52
CPNE8-203ENST00000538596 RHBDL2Q9NX52 303 aa11.8□□□□□ -0.52
CPNE8-203ENST00000538596 ZIM2Q9NZV7 527 aa11.8□□□□□ -0.52
CPNE8-203ENST00000538596 TRIM64CA6NLI5 447 aa11.79□□□□□ -0.52
CPNE8-203ENST00000538596 GOLGA8CPA6NN73 597 aa11.79□□□□□ -0.52
CPNE8-203ENST00000538596 LSM1O15116 133 aaKnown RBP11.79□□□□□ -0.52
CPNE8-203ENST00000538596 AOC2O75106 756 aa11.79□□□□□ -0.52
CPNE8-203ENST00000538596 ALDH2P05091 517 aa11.79□□□□□ -0.52
CPNE8-203ENST00000538596 ENO2P09104 434 aaPredicted RBP11.79□□□□□ -0.52
CPNE8-203ENST00000538596 MZF1P28698 734 aaPredicted RBP11.79□□□□□ -0.52
CPNE8-203ENST00000538596 POLR2IP36954 125 aaKnown RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms