RNA–Protein interactions for RNA: ENST00000537022.5

COPS7A-206, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 4

Gene COPS7A, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-206ENST00000537022 DNMT3AQ9Y6K1 912 aaPredicted RBP13.42□□□□□ -0.26
COPS7A-206ENST00000537022 SHANK1Q9Y566 2161 aa13.42□□□□□ -0.26
COPS7A-206ENST00000537022 ICE1Q9Y2F5 2266 aa13.42□□□□□ -0.26
COPS7A-206ENST00000537022 LOC285095A0A1B0GVY8 99 aa13.41□□□□□ -0.26
COPS7A-206ENST00000537022 TLCD2A6NGC4 264 aa13.41□□□□□ -0.26
COPS7A-206ENST00000537022 PMPCBO75439 489 aa13.41□□□□□ -0.26
COPS7A-206ENST00000537022 EPOP01588 193 aa13.41□□□□□ -0.26
COPS7A-206ENST00000537022 PTPN3P26045 913 aa13.41□□□□□ -0.26
COPS7A-206ENST00000537022 NR2C2P49116 596 aa13.41□□□□□ -0.26
COPS7A-206ENST00000537022 MLLT10P55197 1068 aa13.41□□□□□ -0.26
COPS7A-206ENST00000537022 PPP1CAP62136 330 aa13.41□□□□□ -0.26
COPS7A-206ENST00000537022 MESDQ14696 234 aa13.41□□□□□ -0.26
COPS7A-206ENST00000537022 UGT8Q16880 541 aa13.41□□□□□ -0.26
COPS7A-206ENST00000537022 ASTE1Q2TB18 679 aaPredicted RBP13.41□□□□□ -0.26
COPS7A-206ENST00000537022 LDLRAP1Q5SW96 308 aa13.41□□□□□ -0.26
COPS7A-206ENST00000537022 PWWP2BQ6NUJ5 590 aa13.41□□□□□ -0.26
COPS7A-206ENST00000537022 NPNTQ6UXI9 565 aa13.41□□□□□ -0.26
COPS7A-206ENST00000537022 BZW1Q7L1Q6 419 aaKnown RBP13.41□□□□□ -0.26
COPS7A-206ENST00000537022 TMEM135Q86UB9 458 aa13.41□□□□□ -0.26
COPS7A-206ENST00000537022 LUZP1Q86V48 1076 aa13.41□□□□□ -0.26
COPS7A-206ENST00000537022 CARFQ8N187 725 aa13.41□□□□□ -0.26
COPS7A-206ENST00000537022 TTC30BQ8N4P2 665 aa13.41□□□□□ -0.26
COPS7A-206ENST00000537022 DDHD1Q8NEL9 900 aa13.41□□□□□ -0.26
COPS7A-206ENST00000537022 GPR150Q8NGU9 434 aa13.41□□□□□ -0.26
COPS7A-206ENST00000537022 GDAP1Q8TB36 358 aa13.41□□□□□ -0.26
COPS7A-206ENST00000537022 THAP4Q8WY91 577 aa13.41□□□□□ -0.26
COPS7A-206ENST00000537022 RNF31Q96EP0 1072 aa13.41□□□□□ -0.26
COPS7A-206ENST00000537022 ZNF514Q96K75 400 aaPredicted RBP13.41□□□□□ -0.26
COPS7A-206ENST00000537022 BPIFA1Q9NP55 256 aa13.41□□□□□ -0.26
COPS7A-206ENST00000537022 IL26Q9NPH9 171 aa13.41□□□□□ -0.26
COPS7A-206ENST00000537022 HACD3Q9P035 362 aa13.41□□□□□ -0.26
COPS7A-206ENST00000537022 TRIM10Q9UDY6 481 aa13.41□□□□□ -0.26
COPS7A-206ENST00000537022 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.41□□□□□ -0.26
COPS7A-206ENST00000537022 NBPF19A0A087WUL8 3843 aa13.4□□□□□ -0.26
COPS7A-206ENST00000537022 SSU72P8A0A1W2PR75 194 aa13.4□□□□□ -0.26
COPS7A-206ENST00000537022 KRT1P04264 644 aa13.4□□□□□ -0.26
COPS7A-206ENST00000537022 FOLR1P15328 257 aa13.4□□□□□ -0.26
COPS7A-206ENST00000537022 PTPN4P29074 926 aa13.4□□□□□ -0.26
COPS7A-206ENST00000537022 SPAM1P38567 509 aa13.4□□□□□ -0.26
COPS7A-206ENST00000537022 HSD11B2P80365 405 aa13.4□□□□□ -0.26
COPS7A-206ENST00000537022 LAMB3Q13751 1172 aa13.4□□□□□ -0.26
COPS7A-206ENST00000537022 ITGA9Q13797 1035 aa13.4□□□□□ -0.26
COPS7A-206ENST00000537022 PRKD1Q15139 912 aaPredicted RBP13.4□□□□□ -0.26
COPS7A-206ENST00000537022 RPE65Q16518 533 aa13.4□□□□□ -0.26
COPS7A-206ENST00000537022 SYVN1Q86TM6 617 aa13.4□□□□□ -0.26
COPS7A-206ENST00000537022 RFX6Q8HWS3 928 aa13.4□□□□□ -0.26
COPS7A-206ENST00000537022 D2HGDHQ8N465 521 aa13.4□□□□□ -0.26
COPS7A-206ENST00000537022 RASGEF1AQ8N9B8 481 aa13.4□□□□□ -0.26
COPS7A-206ENST00000537022 OR8K5Q8NH50 307 aa13.4□□□□□ -0.26
COPS7A-206ENST00000537022 SLC35G2Q8TBE7 412 aa13.4□□□□□ -0.26
COPS7A-206ENST00000537022 ZFPM2Q8WW38 1151 aa13.4□□□□□ -0.26
COPS7A-206ENST00000537022 MAP3K3Q99759 626 aa13.4□□□□□ -0.26
COPS7A-206ENST00000537022 FGF21Q9NSA1 209 aa13.4□□□□□ -0.26
COPS7A-206ENST00000537022 SMOXQ9NWM0 555 aa13.4□□□□□ -0.26
COPS7A-206ENST00000537022 DDX56Q9NY93 547 aaKnown RBP13.4□□□□□ -0.26
COPS7A-206ENST00000537022 IL17CQ9P0M4 197 aa13.4□□□□□ -0.26
COPS7A-206ENST00000537022 FAM153AQ9UHL3 310 aa13.4□□□□□ -0.26
COPS7A-206ENST00000537022 PCDHGA9Q9Y5G4 932 aaKnown RBP13.4□□□□□ -0.26
COPS7A-206ENST00000537022 PRRC2CQ9Y520 2896 aaKnown RBP13.39□□□□□ -0.27
COPS7A-206ENST00000537022 BLACEA4D250 179 aa13.39□□□□□ -0.27
COPS7A-206ENST00000537022 KLHL33A6NCF5 533 aa13.39□□□□□ -0.27
COPS7A-206ENST00000537022 OR5K3A6NET4 321 aa13.39□□□□□ -0.27
COPS7A-206ENST00000537022 CPNE3O75131 537 aaKnown RBP13.39□□□□□ -0.27
COPS7A-206ENST00000537022 POP7O75817 140 aaKnown RBP13.39□□□□□ -0.27
COPS7A-206ENST00000537022 PDGFAP04085 211 aa13.39□□□□□ -0.27
COPS7A-206ENST00000537022 EBLN1P0CF75 366 aa13.39□□□□□ -0.27
COPS7A-206ENST00000537022 MTHFD1P11586 935 aaKnown RBP13.39□□□□□ -0.27
COPS7A-206ENST00000537022 CD68P34810 354 aaPredicted RBP13.39□□□□□ -0.27
COPS7A-206ENST00000537022 TNNT3P45378 269 aaPredicted RBP13.39□□□□□ -0.27
COPS7A-206ENST00000537022 ARL4DP49703 201 aa13.39□□□□□ -0.27
COPS7A-206ENST00000537022 CTSCP53634 463 aa13.39□□□□□ -0.27
COPS7A-206ENST00000537022 WNT3AP56704 352 aa13.39□□□□□ -0.27
COPS7A-206ENST00000537022 RPS15P62841 145 aaKnown RBP13.39□□□□□ -0.27
COPS7A-206ENST00000537022 TUBB4BP68371 445 aa13.39□□□□□ -0.27
COPS7A-206ENST00000537022 TUBB2AQ13885 445 aa13.39□□□□□ -0.27
COPS7A-206ENST00000537022 KCNAB1Q14722 419 aa13.39□□□□□ -0.27
COPS7A-206ENST00000537022 PLCL1Q15111 1095 aa13.39□□□□□ -0.27
COPS7A-206ENST00000537022 ODF2Q5BJF6 829 aa13.39□□□□□ -0.27
COPS7A-206ENST00000537022 SIRPB2Q5JXA9 342 aa13.39□□□□□ -0.27
COPS7A-206ENST00000537022 DNTTIP2Q5QJE6 756 aaKnown RBP13.39□□□□□ -0.27
COPS7A-206ENST00000537022 FAM182AQ5T1J6 154 aa13.39□□□□□ -0.27
COPS7A-206ENST00000537022 PAPD7Q5XG87 772 aaKnown RBP13.39□□□□□ -0.27
COPS7A-206ENST00000537022 METRNLQ641Q3 311 aa13.39□□□□□ -0.27
COPS7A-206ENST00000537022 KDELC1Q6UW63 502 aa13.39□□□□□ -0.27
COPS7A-206ENST00000537022 ZNF517Q6ZMY9 492 aaPredicted RBP13.39□□□□□ -0.27
COPS7A-206ENST00000537022 RHOT2Q8IXI1 618 aa13.39□□□□□ -0.27
COPS7A-206ENST00000537022 GALNT11Q8NCW6 608 aa13.39□□□□□ -0.27
COPS7A-206ENST00000537022 DNAJC7Q99615 494 aa13.39□□□□□ -0.27
COPS7A-206ENST00000537022 TUBB2BQ9BVA1 445 aa13.39□□□□□ -0.27
COPS7A-206ENST00000537022 TRIM55Q9BYV6 548 aa13.39□□□□□ -0.27
COPS7A-206ENST00000537022 DEF6Q9H4E7 631 aa13.39□□□□□ -0.27
COPS7A-206ENST00000537022 MLXIPLQ9NP71 852 aa13.39□□□□□ -0.27
COPS7A-206ENST00000537022 LATS2Q9NRM7 1088 aa13.39□□□□□ -0.27
COPS7A-206ENST00000537022 UBP1Q9NZI7 540 aa13.39□□□□□ -0.27
COPS7A-206ENST00000537022 IFNKQ9P0W0 207 aa13.39□□□□□ -0.27
COPS7A-206ENST00000537022 SPTBP11277 2137 aa13.39□□□□□ -0.27
COPS7A-206ENST00000537022 ESPL1Q14674 2120 aa13.39□□□□□ -0.27
COPS7A-206ENST00000537022 GLYATL1P3A0A0U1RQE8 302 aa13.38□□□□□ -0.27
COPS7A-206ENST00000537022 GOLGA6L19H0YKK7 550 aa13.38□□□□□ -0.27
COPS7A-206ENST00000537022 VPS4BO75351 444 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms