RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 ATCAYQ86WG3 371 aa10.98□□□□□ -0.65
CLSTN3-206ENST00000535668 CPNE8Q86YQ8 564 aa10.98□□□□□ -0.65
CLSTN3-206ENST00000535668 RHOT2Q8IXI1 618 aa10.98□□□□□ -0.65
CLSTN3-206ENST00000535668 STAMBPL1Q96FJ0 436 aa10.98□□□□□ -0.65
CLSTN3-206ENST00000535668 TGM7Q96PF1 710 aa10.98□□□□□ -0.65
CLSTN3-206ENST00000535668 FCRL5Q96RD9 977 aa10.98□□□□□ -0.65
CLSTN3-206ENST00000535668 GPR63Q9BZJ6 419 aa10.98□□□□□ -0.65
CLSTN3-206ENST00000535668 CHRNA10Q9GZZ6 450 aa10.98□□□□□ -0.65
CLSTN3-206ENST00000535668 CBX8Q9HC52 389 aa10.98□□□□□ -0.65
CLSTN3-206ENST00000535668 CUEDC1Q9NWM3 386 aaPredicted RBP10.98□□□□□ -0.65
CLSTN3-206ENST00000535668 FAM153AQ9UHL3 310 aa10.98□□□□□ -0.65
CLSTN3-206ENST00000535668 ACSL5Q9ULC5 683 aa10.98□□□□□ -0.65
CLSTN3-206ENST00000535668 INTUQ9ULD6 942 aa10.98□□□□□ -0.65
CLSTN3-206ENST00000535668 SPO11Q9Y5K1 396 aa10.98□□□□□ -0.65
CLSTN3-206ENST00000535668 MRPS18BQ9Y676 258 aaKnown RBP10.98□□□□□ -0.65
CLSTN3-206ENST00000535668 CNTRLQ7Z7A1 2325 aa10.98□□□□□ -0.65
CLSTN3-206ENST00000535668 A0A0A6YYK5 440 aaPredicted RBP10.97□□□□□ -0.65
CLSTN3-206ENST00000535668 OR5K3A6NET4 321 aa10.97□□□□□ -0.65
CLSTN3-206ENST00000535668 WIPF3A6NGB9 483 aa10.97□□□□□ -0.65
CLSTN3-206ENST00000535668 OR52A4PA6NMU1 304 aa10.97□□□□□ -0.65
CLSTN3-206ENST00000535668 PDZK1P1A8MUH7 402 aa10.97□□□□□ -0.65
CLSTN3-206ENST00000535668 K7EM74 188 aa10.97□□□□□ -0.65
CLSTN3-206ENST00000535668 MATN2O00339 956 aa10.97□□□□□ -0.65
CLSTN3-206ENST00000535668 APOL1O14791 398 aa10.97□□□□□ -0.65
CLSTN3-206ENST00000535668 TYRP1P17643 537 aa10.97□□□□□ -0.65
CLSTN3-206ENST00000535668 HLA-DPA1P20036 260 aa10.97□□□□□ -0.65
CLSTN3-206ENST00000535668 PTPN3P26045 913 aa10.97□□□□□ -0.65
CLSTN3-206ENST00000535668 CD68P34810 354 aaPredicted RBP10.97□□□□□ -0.65
CLSTN3-206ENST00000535668 HALP42357 657 aa10.97□□□□□ -0.65
CLSTN3-206ENST00000535668 ITGA9Q13797 1035 aa10.97□□□□□ -0.65
CLSTN3-206ENST00000535668 ATP1A1-AS1Q5TC04 95 aa10.97□□□□□ -0.65
CLSTN3-206ENST00000535668 CCDC70Q6NSX1 233 aa10.97□□□□□ -0.65
CLSTN3-206ENST00000535668 TRIM48Q8IWZ4 208 aa10.97□□□□□ -0.65
CLSTN3-206ENST00000535668 KLHDC8BQ8IXV7 354 aa10.97□□□□□ -0.65
CLSTN3-206ENST00000535668 TEX19Q8NA77 164 aa10.97□□□□□ -0.65
CLSTN3-206ENST00000535668 ZNF501Q96CX3 271 aaPredicted RBP10.97□□□□□ -0.65
CLSTN3-206ENST00000535668 CXorf40BQ96DE9 158 aa10.97□□□□□ -0.65
CLSTN3-206ENST00000535668 KIR3DX1Q9H7L2 352 aa10.97□□□□□ -0.65
CLSTN3-206ENST00000535668 DDX56Q9NY93 547 aaKnown RBP10.97□□□□□ -0.65
CLSTN3-206ENST00000535668 KLHL3Q9UH77 587 aa10.97□□□□□ -0.65
CLSTN3-206ENST00000535668 RARRES3Q9UL19 164 aa10.97□□□□□ -0.65
CLSTN3-206ENST00000535668 SHOC2Q9UQ13 582 aa10.97□□□□□ -0.65
CLSTN3-206ENST00000535668 PLAAQ9Y263 795 aa10.97□□□□□ -0.65
CLSTN3-206ENST00000535668 TTLL3Q9Y4R7 772 aa10.97□□□□□ -0.65
CLSTN3-206ENST00000535668 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.97□□□□□ -0.65
CLSTN3-206ENST00000535668 C17orf113A0A1B0GUU1 675 aa10.96□□□□□ -0.65
CLSTN3-206ENST00000535668 LRRD1A4D1F6 860 aa10.96□□□□□ -0.65
CLSTN3-206ENST00000535668 AURKAO14965 403 aa10.96□□□□□ -0.65
CLSTN3-206ENST00000535668 CPNE3O75131 537 aaKnown RBP10.96□□□□□ -0.65
CLSTN3-206ENST00000535668 POP7O75817 140 aaKnown RBP10.96□□□□□ -0.65
CLSTN3-206ENST00000535668 TIAF1O95411 115 aa10.96□□□□□ -0.65
CLSTN3-206ENST00000535668 ZBTB11O95625 1053 aaPredicted RBP10.96□□□□□ -0.65
CLSTN3-206ENST00000535668 MT-CYBP00156 380 aaPredicted RBP10.96□□□□□ -0.65
CLSTN3-206ENST00000535668 MTHFD1P11586 935 aaKnown RBP10.96□□□□□ -0.65
CLSTN3-206ENST00000535668 FOLR1P15328 257 aa10.96□□□□□ -0.65
CLSTN3-206ENST00000535668 RPL10P27635 214 aaKnown RBP10.96□□□□□ -0.65
CLSTN3-206ENST00000535668 CASP14P31944 242 aa10.96□□□□□ -0.65
CLSTN3-206ENST00000535668 RORAP35398 523 aa10.96□□□□□ -0.65
CLSTN3-206ENST00000535668 CDKN2BP42772 138 aa10.96□□□□□ -0.65
CLSTN3-206ENST00000535668 GSDMDP57764 484 aa10.96□□□□□ -0.65
CLSTN3-206ENST00000535668 AP1B1Q10567 949 aa10.96□□□□□ -0.65
CLSTN3-206ENST00000535668 MPP3Q13368 585 aa10.96□□□□□ -0.65
CLSTN3-206ENST00000535668 MSLNQ13421 630 aaPredicted RBP10.96□□□□□ -0.65
CLSTN3-206ENST00000535668 TUBB3Q13509 450 aa10.96□□□□□ -0.65
CLSTN3-206ENST00000535668 TFDP2Q14188 446 aa10.96□□□□□ -0.65
CLSTN3-206ENST00000535668 ERV3-1Q14264 604 aa10.96□□□□□ -0.65
CLSTN3-206ENST00000535668 ZNF658BQ4V348 819 aaPredicted RBP10.96□□□□□ -0.65
CLSTN3-206ENST00000535668 BCL7AQ4VC05 210 aa10.96□□□□□ -0.65
CLSTN3-206ENST00000535668 ZNF648Q5T619 568 aaPredicted RBP10.96□□□□□ -0.65
CLSTN3-206ENST00000535668 CAPRIN2Q6IMN6 1127 aaKnown RBP10.96□□□□□ -0.65
CLSTN3-206ENST00000535668 RASGRP3Q8IV61 690 aa10.96□□□□□ -0.65
CLSTN3-206ENST00000535668 RASGEF1AQ8N9B8 481 aa10.96□□□□□ -0.65
CLSTN3-206ENST00000535668 GLIS1Q8NBF1 620 aa10.96□□□□□ -0.65
CLSTN3-206ENST00000535668 OR8K1Q8NGG5 319 aa10.96□□□□□ -0.65
CLSTN3-206ENST00000535668 SPATA22Q8NHS9 363 aa10.96□□□□□ -0.65
CLSTN3-206ENST00000535668 SLC35G2Q8TBE7 412 aa10.96□□□□□ -0.65
CLSTN3-206ENST00000535668 CT55Q8WUE5 264 aa10.96□□□□□ -0.65
CLSTN3-206ENST00000535668 MRGPRX2Q96LB1 330 aa10.96□□□□□ -0.65
CLSTN3-206ENST00000535668 AGAP3Q96P47 875 aa10.96□□□□□ -0.65
CLSTN3-206ENST00000535668 INSM2Q96T92 566 aaPredicted RBP10.96□□□□□ -0.65
CLSTN3-206ENST00000535668 DPH2Q9BQC3 489 aaPredicted RBP10.96□□□□□ -0.65
CLSTN3-206ENST00000535668 PACSIN1Q9BY11 444 aa10.96□□□□□ -0.65
CLSTN3-206ENST00000535668 PITPNM3Q9BZ71 974 aa10.96□□□□□ -0.65
CLSTN3-206ENST00000535668 ZMYND15Q9H091 742 aa10.96□□□□□ -0.65
CLSTN3-206ENST00000535668 OSGEPL1Q9H4B0 414 aa10.96□□□□□ -0.65
CLSTN3-206ENST00000535668 ACTL8Q9H568 366 aa10.96□□□□□ -0.65
CLSTN3-206ENST00000535668 ENAMQ9NRM1 1142 aa10.96□□□□□ -0.65
CLSTN3-206ENST00000535668 FGF21Q9NSA1 209 aa10.96□□□□□ -0.65
CLSTN3-206ENST00000535668 MAP4K5Q9Y4K4 846 aa10.96□□□□□ -0.65
CLSTN3-206ENST00000535668 LRBAP50851 2863 aa10.95□□□□□ -0.66
CLSTN3-206ENST00000535668 PIPSLA2A3N6 862 aa10.95□□□□□ -0.66
CLSTN3-206ENST00000535668 MGAT4DA6NG13 374 aa10.95□□□□□ -0.66
CLSTN3-206ENST00000535668 RASSF9O75901 435 aa10.95□□□□□ -0.66
CLSTN3-206ENST00000535668 PDGFAP04085 211 aa10.95□□□□□ -0.66
CLSTN3-206ENST00000535668 CAPN1P07384 714 aa10.95□□□□□ -0.66
CLSTN3-206ENST00000535668 NDUFS1P28331 727 aa10.95□□□□□ -0.66
CLSTN3-206ENST00000535668 SPAM1P38567 509 aa10.95□□□□□ -0.66
CLSTN3-206ENST00000535668 SSR1P43307 286 aaKnown RBP10.95□□□□□ -0.66
CLSTN3-206ENST00000535668 MAPK9P45984 424 aa10.95□□□□□ -0.66
CLSTN3-206ENST00000535668 SEPHS1P49903 392 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 173.1 ms