RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 C2CD4AQ8NCU7 369 aaPredicted RBP17.19■□□□□ 0.34
NXF1-216ENST00000533499 SETD7Q8WTS6 366 aaKnown RBP17.19■□□□□ 0.34
NXF1-216ENST00000533499 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.19■□□□□ 0.34
NXF1-216ENST00000533499 LPGAT1Q92604 370 aa17.19■□□□□ 0.34
NXF1-216ENST00000533499 SMYD2Q9NRG4 433 aa17.19■□□□□ 0.34
NXF1-216ENST00000533499 INTS10Q9NVR2 710 aaKnown RBP17.19■□□□□ 0.34
NXF1-216ENST00000533499 TRNAU1APQ9NX07 287 aaKnown RBP17.19■□□□□ 0.34
NXF1-216ENST00000533499 NEMP2A6NFY4 417 aa17.18■□□□□ 0.34
NXF1-216ENST00000533499 IQCF5A8MTL0 148 aa17.18■□□□□ 0.34
NXF1-216ENST00000533499 CXorf49A8MYA2 514 aaPredicted RBP17.18■□□□□ 0.34
NXF1-216ENST00000533499 E5RI56 91 aa17.18■□□□□ 0.34
NXF1-216ENST00000533499 AP2A2O94973 939 aa17.18■□□□□ 0.34
NXF1-216ENST00000533499 FTH1P02794 183 aa17.18■□□□□ 0.34
NXF1-216ENST00000533499 CHRM3P20309 590 aa17.18■□□□□ 0.34
NXF1-216ENST00000533499 SAT1P21673 171 aa17.18■□□□□ 0.34
NXF1-216ENST00000533499 CD151P48509 253 aa17.18■□□□□ 0.34
NXF1-216ENST00000533499 PRLHRP49683 370 aa17.18■□□□□ 0.34
NXF1-216ENST00000533499 BOP1Q14137 746 aaKnown RBP17.18■□□□□ 0.34
NXF1-216ENST00000533499 SEPT7Q16181 437 aaKnown RBP17.18■□□□□ 0.34
NXF1-216ENST00000533499 BCL7AQ4VC05 210 aa17.18■□□□□ 0.34
NXF1-216ENST00000533499 SYTL3Q4VX76 610 aa17.18■□□□□ 0.34
NXF1-216ENST00000533499 NAPRTQ6XQN6 538 aa17.18■□□□□ 0.34
NXF1-216ENST00000533499 LRRC6Q86X45 466 aa17.18■□□□□ 0.34
NXF1-216ENST00000533499 CFAP206Q8IYR0 622 aa17.18■□□□□ 0.34
NXF1-216ENST00000533499 GPATCH11Q8N954 259 aa17.18■□□□□ 0.34
NXF1-216ENST00000533499 FAM46DQ8NEK8 389 aa17.18■□□□□ 0.34
NXF1-216ENST00000533499 SCG3Q8WXD2 468 aaKnown RBP17.18■□□□□ 0.34
NXF1-216ENST00000533499 ELMO1Q92556 727 aa17.18■□□□□ 0.34
NXF1-216ENST00000533499 FAM122AQ96E09 287 aa17.18■□□□□ 0.34
NXF1-216ENST00000533499 SCARF2Q96GP6 870 aaPredicted RBP17.18■□□□□ 0.34
NXF1-216ENST00000533499 NDNQ99608 321 aa17.18■□□□□ 0.34
NXF1-216ENST00000533499 CCM2Q9BSQ5 444 aa17.18■□□□□ 0.34
NXF1-216ENST00000533499 TSSK1BQ9BXA7 367 aa17.18■□□□□ 0.34
NXF1-216ENST00000533499 NSMCE4AQ9NXX6 385 aa17.18■□□□□ 0.34
NXF1-216ENST00000533499 SIRPGQ9P1W8 387 aa17.18■□□□□ 0.34
NXF1-216ENST00000533499 SLC23A2Q9UGH3 650 aa17.18■□□□□ 0.34
NXF1-216ENST00000533499 GPR34Q9UPC5 381 aa17.18■□□□□ 0.34
NXF1-216ENST00000533499 PSAT1Q9Y617 370 aa17.18■□□□□ 0.34
NXF1-216ENST00000533499 FAM186AA6NE01 2351 aa17.18■□□□□ 0.34
NXF1-216ENST00000533499 WDR87Q6ZQQ6 2873 aa17.17■□□□□ 0.34
NXF1-216ENST00000533499 TRBV23OR9-2A0A075B6M9 112 aa17.17■□□□□ 0.34
NXF1-216ENST00000533499 A0A087WUV0 522 aaPredicted RBP17.17■□□□□ 0.34
NXF1-216ENST00000533499 FAM159BA6NKW6 160 aa17.17■□□□□ 0.34
NXF1-216ENST00000533499 PDZK1P1A8MUH7 402 aa17.17■□□□□ 0.34
NXF1-216ENST00000533499 B4DGG1 531 aa17.17■□□□□ 0.34
NXF1-216ENST00000533499 POC1B-GALNT4F8VUJ3 575 aa17.17■□□□□ 0.34
NXF1-216ENST00000533499 QSOX1O00391 747 aa17.17■□□□□ 0.34
NXF1-216ENST00000533499 CDX4O14627 284 aaPredicted RBP17.17■□□□□ 0.34
NXF1-216ENST00000533499 NIPSNAP2O75323 286 aa17.17■□□□□ 0.34
NXF1-216ENST00000533499 AHSGP02765 367 aa17.17■□□□□ 0.34
NXF1-216ENST00000533499 TUBBP07437 444 aa17.17■□□□□ 0.34
NXF1-216ENST00000533499 PKMP14618 531 aaKnown RBP17.17■□□□□ 0.34
NXF1-216ENST00000533499 PTPRZ1P23471 2315 aaPredicted RBP17.17■□□□□ 0.34
NXF1-216ENST00000533499 LEPRP48357 1165 aaKnown RBP17.17■□□□□ 0.34
NXF1-216ENST00000533499 LRP8Q14114 963 aa17.17■□□□□ 0.34
NXF1-216ENST00000533499 STPG1Q5TH74 334 aa17.17■□□□□ 0.34
NXF1-216ENST00000533499 KIAA0408Q6ZU52 694 aa17.17■□□□□ 0.34
NXF1-216ENST00000533499 CNTN4Q8IWV2 1026 aa17.17■□□□□ 0.34
NXF1-216ENST00000533499 SLC25A45Q8N413 288 aa17.17■□□□□ 0.34
NXF1-216ENST00000533499 EID2Q8N6I1 236 aa17.17■□□□□ 0.34
NXF1-216ENST00000533499 SAP25Q8TEE9 199 aa17.17■□□□□ 0.34
NXF1-216ENST00000533499 CYTH2Q99418 400 aa17.17■□□□□ 0.34
NXF1-216ENST00000533499 P2RY12Q9H244 342 aa17.17■□□□□ 0.34
NXF1-216ENST00000533499 DPEP2Q9H4A9 486 aa17.17■□□□□ 0.34
NXF1-216ENST00000533499 GULP1Q9UBP9 304 aa17.17■□□□□ 0.34
NXF1-216ENST00000533499 TSR3Q9UJK0 312 aaKnown RBP17.17■□□□□ 0.34
NXF1-216ENST00000533499 PCDHB1Q9Y5F3 818 aa17.17■□□□□ 0.34
NXF1-216ENST00000533499 MGAT4DA6NG13 374 aa17.16■□□□□ 0.34
NXF1-216ENST00000533499 YY2O15391 372 aa17.16■□□□□ 0.34
NXF1-216ENST00000533499 RIPK2O43353 540 aa17.16■□□□□ 0.34
NXF1-216ENST00000533499 SGTAO43765 313 aa17.16■□□□□ 0.34
NXF1-216ENST00000533499 ESR1P03372 595 aa17.16■□□□□ 0.34
NXF1-216ENST00000533499 ALPPL2P10696 532 aa17.16■□□□□ 0.34
NXF1-216ENST00000533499 IDSP22304 550 aa17.16■□□□□ 0.34
NXF1-216ENST00000533499 RPS3P23396 243 aaKnown RBP eCLIP17.16■□□□□ 0.34
NXF1-216ENST00000533499 GABRB3P28472 473 aa17.16■□□□□ 0.34
NXF1-216ENST00000533499 ARHGAP8P85298 464 aa17.16■□□□□ 0.34
NXF1-216ENST00000533499 NFE2L1Q14494 772 aa17.16■□□□□ 0.34
NXF1-216ENST00000533499 MAP9Q49MG5 647 aa17.16■□□□□ 0.34
NXF1-216ENST00000533499 CTSL3PQ5NE16 218 aa17.16■□□□□ 0.34
NXF1-216ENST00000533499 ZNF449Q6P9G9 518 aa17.16■□□□□ 0.34
NXF1-216ENST00000533499 LKAAEAR1Q8TD35 194 aa17.16■□□□□ 0.34
NXF1-216ENST00000533499 AENQ8WTP8 325 aaKnown RBP17.16■□□□□ 0.34
NXF1-216ENST00000533499 PANX3Q96QZ0 392 aa17.16■□□□□ 0.34
NXF1-216ENST00000533499 TIMM29Q9BSF4 260 aa17.16■□□□□ 0.34
NXF1-216ENST00000533499 DNAAF2Q9NVR5 837 aaKnown RBP17.16■□□□□ 0.34
NXF1-216ENST00000533499 TAAR2Q9P1P5 351 aa17.16■□□□□ 0.34
NXF1-216ENST00000533499 RABGEF1Q9UJ41 708 aa17.16■□□□□ 0.34
NXF1-216ENST00000533499 PSMD13Q9UNM6 376 aa17.16■□□□□ 0.34
NXF1-216ENST00000533499 IKBKGQ9Y6K9 419 aa17.16■□□□□ 0.34
NXF1-216ENST00000533499 USP34Q70CQ2 3546 aa17.16■□□□□ 0.34
NXF1-216ENST00000533499 ZFC3H1O60293 1989 aaKnown RBP17.15■□□□□ 0.34
NXF1-216ENST00000533499 DMDP11532 3685 aa17.15■□□□□ 0.34
NXF1-216ENST00000533499 MYO15AQ9UKN7 3530 aa17.15■□□□□ 0.34
NXF1-216ENST00000533499 EXOC1LA0A1B0GW35 172 aa17.15■□□□□ 0.34
NXF1-216ENST00000533499 LMO7DNF2Z398 122 aa17.15■□□□□ 0.34
NXF1-216ENST00000533499 H3BMM5 538 aa17.15■□□□□ 0.34
NXF1-216ENST00000533499 FAM155BO75949 473 aa17.15■□□□□ 0.34
NXF1-216ENST00000533499 RPL10P27635 214 aaKnown RBP17.15■□□□□ 0.34
NXF1-216ENST00000533499 BIRC2Q13490 618 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms