RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 C17orf113A0A1B0GUU1 675 aa12.33□□□□□ -0.44
COPB1-208ENST00000532088 PRSS38A1L453 326 aa12.33□□□□□ -0.44
COPB1-208ENST00000532088 TMEM202A6NGA9 273 aa12.33□□□□□ -0.44
COPB1-208ENST00000532088 CXorf49A8MYA2 514 aaPredicted RBP12.33□□□□□ -0.44
COPB1-208ENST00000532088 PROB1E7EW31 1015 aa12.33□□□□□ -0.44
COPB1-208ENST00000532088 DFNA5O60443 496 aa12.33□□□□□ -0.44
COPB1-208ENST00000532088 DNAJC6O75061 913 aa12.33□□□□□ -0.44
COPB1-208ENST00000532088 LRP3O75074 770 aa12.33□□□□□ -0.44
COPB1-208ENST00000532088 RASGRP1O95267 797 aa12.33□□□□□ -0.44
COPB1-208ENST00000532088 AHSGP02765 367 aa12.33□□□□□ -0.44
COPB1-208ENST00000532088 OR56A5P0C7T3 313 aa12.33□□□□□ -0.44
COPB1-208ENST00000532088 ZNF8P17098 575 aaPredicted RBP12.33□□□□□ -0.44
COPB1-208ENST00000532088 CNTFP26441 200 aa12.33□□□□□ -0.44
COPB1-208ENST00000532088 CTSKP43235 329 aa12.33□□□□□ -0.44
COPB1-208ENST00000532088 CD151P48509 253 aa12.33□□□□□ -0.44
COPB1-208ENST00000532088 POLD2P49005 469 aa12.33□□□□□ -0.44
COPB1-208ENST00000532088 PRLHRP49683 370 aa12.33□□□□□ -0.44
COPB1-208ENST00000532088 SERPINB9P50453 376 aa12.33□□□□□ -0.44
COPB1-208ENST00000532088 EIF3BP55884 814 aaKnown RBP12.33□□□□□ -0.44
COPB1-208ENST00000532088 CTBP1Q13363 440 aa12.33□□□□□ -0.44
COPB1-208ENST00000532088 LRP8Q14114 963 aa12.33□□□□□ -0.44
COPB1-208ENST00000532088 FZD2Q14332 565 aa12.33□□□□□ -0.44
COPB1-208ENST00000532088 KHDC1Q4VXA5 237 aaKnown RBP12.33□□□□□ -0.44
COPB1-208ENST00000532088 IL27RAQ6UWB1 636 aa12.33□□□□□ -0.44
COPB1-208ENST00000532088 ENPP7Q6UWV6 458 aa12.33□□□□□ -0.44
COPB1-208ENST00000532088 STRA8Q7Z7C7 330 aa12.33□□□□□ -0.44
COPB1-208ENST00000532088 TDRPQ86YL5 185 aa12.33□□□□□ -0.44
COPB1-208ENST00000532088 SDR16C5Q8N3Y7 309 aa12.33□□□□□ -0.44
COPB1-208ENST00000532088 PKNOX2Q96KN3 472 aa12.33□□□□□ -0.44
COPB1-208ENST00000532088 BIRC8Q96P09 236 aa12.33□□□□□ -0.44
COPB1-208ENST00000532088 PANX3Q96QZ0 392 aa12.33□□□□□ -0.44
COPB1-208ENST00000532088 TIMM29Q9BSF4 260 aa12.33□□□□□ -0.44
COPB1-208ENST00000532088 DHRS4Q9BTZ2 278 aa12.33□□□□□ -0.44
COPB1-208ENST00000532088 GRIP2Q9C0E4 1043 aa12.33□□□□□ -0.44
COPB1-208ENST00000532088 OR2AG1Q9H205 316 aa12.33□□□□□ -0.44
COPB1-208ENST00000532088 RHOJQ9H4E5 214 aa12.33□□□□□ -0.44
COPB1-208ENST00000532088 CAPN10Q9HC96 672 aa12.33□□□□□ -0.44
COPB1-208ENST00000532088 ARFGAP3Q9NP61 516 aa12.33□□□□□ -0.44
COPB1-208ENST00000532088 KLHL42Q9P2K6 505 aa12.33□□□□□ -0.44
COPB1-208ENST00000532088 KLQ9UEF7 1012 aa12.33□□□□□ -0.44
COPB1-208ENST00000532088 GMEB2Q9UKD1 530 aa12.33□□□□□ -0.44
COPB1-208ENST00000532088 SLC6A14Q9UN76 642 aa12.33□□□□□ -0.44
COPB1-208ENST00000532088 NOVA2Q9UNW9 492 aaKnown RBP12.33□□□□□ -0.44
COPB1-208ENST00000532088 ANKRD6Q9Y2G4 727 aa12.33□□□□□ -0.44
COPB1-208ENST00000532088 UQCRHLA0A096LP55 91 aa12.32□□□□□ -0.44
COPB1-208ENST00000532088 EXOC1LA0A1B0GW35 172 aa12.32□□□□□ -0.44
COPB1-208ENST00000532088 KMOO15229 486 aa12.32□□□□□ -0.44
COPB1-208ENST00000532088 YKT6O15498 198 aa12.32□□□□□ -0.44
COPB1-208ENST00000532088 GRID2O43424 1007 aa12.32□□□□□ -0.44
COPB1-208ENST00000532088 SGTAO43765 313 aa12.32□□□□□ -0.44
COPB1-208ENST00000532088 MTX2O75431 263 aa12.32□□□□□ -0.44
COPB1-208ENST00000532088 HAUS5O94927 633 aa12.32□□□□□ -0.44
COPB1-208ENST00000532088 ASMTLO95671 621 aa12.32□□□□□ -0.44
COPB1-208ENST00000532088 TNFP01375 233 aa12.32□□□□□ -0.44
COPB1-208ENST00000532088 FTH1P02794 183 aa12.32□□□□□ -0.44
COPB1-208ENST00000532088 CSF2P04141 144 aa12.32□□□□□ -0.44
COPB1-208ENST00000532088 UQCRHP07919 91 aa12.32□□□□□ -0.44
COPB1-208ENST00000532088 SYPP08247 313 aa12.32□□□□□ -0.44
COPB1-208ENST00000532088 PKMP14618 531 aaKnown RBP12.32□□□□□ -0.44
COPB1-208ENST00000532088 GABRB3P28472 473 aa12.32□□□□□ -0.44
COPB1-208ENST00000532088 SPRP35270 261 aaPredicted RBP12.32□□□□□ -0.44
COPB1-208ENST00000532088 MPLP40238 635 aa12.32□□□□□ -0.44
COPB1-208ENST00000532088 RXRGP48443 463 aa12.32□□□□□ -0.44
COPB1-208ENST00000532088 CLCNKAP51800 687 aa12.32□□□□□ -0.44
COPB1-208ENST00000532088 LIMK2P53671 638 aa12.32□□□□□ -0.44
COPB1-208ENST00000532088 SRP54P61011 504 aaKnown RBP12.32□□□□□ -0.44
COPB1-208ENST00000532088 MPP1Q00013 466 aa12.32□□□□□ -0.44
COPB1-208ENST00000532088 PPARDQ03181 441 aa12.32□□□□□ -0.44
COPB1-208ENST00000532088 EIF2B5Q13144 721 aaKnown RBP12.32□□□□□ -0.44
COPB1-208ENST00000532088 PYCR3Q53H96 274 aa12.32□□□□□ -0.44
COPB1-208ENST00000532088 TPRG1LQ5T0D9 272 aa12.32□□□□□ -0.44
COPB1-208ENST00000532088 UBAP2Q5T6F2 1119 aaKnown RBP12.32□□□□□ -0.44
COPB1-208ENST00000532088 FAM45BPQ6NSW5 357 aa12.32□□□□□ -0.44
COPB1-208ENST00000532088 TAOK1Q7L7X3 1001 aa12.32□□□□□ -0.44
COPB1-208ENST00000532088 LDB1Q86U70 411 aaPredicted RBP12.32□□□□□ -0.44
COPB1-208ENST00000532088 TRIM74Q86UV6 250 aa12.32□□□□□ -0.44
COPB1-208ENST00000532088 LRRTM4Q86VH4 590 aa12.32□□□□□ -0.44
COPB1-208ENST00000532088 ZC3HC1Q86WB0 502 aaKnown RBP12.32□□□□□ -0.44
COPB1-208ENST00000532088 SPATS2Q86XZ4 545 aaKnown RBP12.32□□□□□ -0.44
COPB1-208ENST00000532088 GALNT13Q8IUC8 556 aa12.32□□□□□ -0.44
COPB1-208ENST00000532088 CTAGE3PQ8IX95 158 aa12.32□□□□□ -0.44
COPB1-208ENST00000532088 RIBC1Q8N443 379 aaPredicted RBP12.32□□□□□ -0.44
COPB1-208ENST00000532088 PPM1NQ8N819 430 aa12.32□□□□□ -0.44
COPB1-208ENST00000532088 RASGEF1AQ8N9B8 481 aa12.32□□□□□ -0.44
COPB1-208ENST00000532088 RNF217Q8TC41 542 aa12.32□□□□□ -0.44
COPB1-208ENST00000532088 FAM45AQ8TCE6 357 aa12.32□□□□□ -0.44
COPB1-208ENST00000532088 KCNJ9Q92806 393 aa12.32□□□□□ -0.44
COPB1-208ENST00000532088 RBBP8Q99708 897 aa12.32□□□□□ -0.44
COPB1-208ENST00000532088 AARSD1Q9BTE6 412 aaKnown RBP12.32□□□□□ -0.44
COPB1-208ENST00000532088 TMEM109Q9BVC6 243 aa12.32□□□□□ -0.44
COPB1-208ENST00000532088 BOCQ9BWV1 1114 aa12.32□□□□□ -0.44
COPB1-208ENST00000532088 ROPN1BQ9BZX4 212 aaPredicted RBP12.32□□□□□ -0.44
COPB1-208ENST00000532088 CCDC68Q9H2F9 335 aa12.32□□□□□ -0.44
COPB1-208ENST00000532088 ROPN1Q9HAT0 212 aaPredicted RBP12.32□□□□□ -0.44
COPB1-208ENST00000532088 FGF22Q9HCT0 170 aa12.32□□□□□ -0.44
COPB1-208ENST00000532088 FBXO6Q9NRD1 293 aaPredicted RBP12.32□□□□□ -0.44
COPB1-208ENST00000532088 LATS2Q9NRM7 1088 aa12.32□□□□□ -0.44
COPB1-208ENST00000532088 TRNAU1APQ9NX07 287 aaKnown RBP12.32□□□□□ -0.44
COPB1-208ENST00000532088 ZMIZ1Q9ULJ6 1067 aa12.32□□□□□ -0.44
COPB1-208ENST00000532088 ATXN2Q99700 1313 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms