RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 IL13RA2Q14627 380 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 STARD3Q14849 445 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 GPNMBQ14956 572 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 OASLQ15646 514 aaKnown RBP1.68□□□□□ -2.14
CD44-212ENST00000524922 AP5B1Q2VPB7 878 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 SH2D4BQ5SQS7 431 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 NCAPH2Q6IBW4 605 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 TYW3Q6IPR3 259 aaKnown RBP1.68□□□□□ -2.14
CD44-212ENST00000524922 CES5AQ6NT32 575 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 ANKRD54Q6NXT1 300 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 CXCL17Q6UXB2 119 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 UNQ6126/PRO20091Q6UXV3 157 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 RRAGAQ7L523 313 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 FAM160B2Q86V87 743 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 SERINC5Q86VE9 423 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 DENND6AQ8IWF6 608 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 MB21D2Q8IYB1 491 aaPredicted RBP1.68□□□□□ -2.14
CD44-212ENST00000524922 TEX11Q8IYF3 940 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 TDRD5Q8NAT2 981 aaKnown RBP1.68□□□□□ -2.14
CD44-212ENST00000524922 PPTC7Q8NI37 304 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 ARRDC2Q8TBH0 407 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 SCFD2Q8WU76 684 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 TMEM170AQ8WVE7 144 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 CPT1BQ92523 772 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 SEPT8Q92599 483 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 SNAPC3Q92966 411 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 USP13Q92995 863 aaPredicted RBP1.68□□□□□ -2.14
CD44-212ENST00000524922 CD101Q93033 1021 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 CLDN23Q96B33 292 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 ZNF501Q96CX3 271 aaPredicted RBP1.68□□□□□ -2.14
CD44-212ENST00000524922 YME1L1Q96TA2 773 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 SLF1Q9BQI6 1058 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 PAGR1Q9BTK6 254 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 EGLN1Q9GZT9 426 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 LRRC4Q9HBW1 653 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 PTPRHQ9HD43 1115 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 NOX4Q9NPH5 578 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 SCRT2Q9NQ03 307 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 TMLHEQ9NVH6 421 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 ANKRD10Q9NXR5 420 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 SMARCAL1Q9NZC9 954 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 ZNF224Q9NZL3 707 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 OR6C3Q9NZP0 311 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 C1RLQ9NZP8 487 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 NYAP2Q9P242 653 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 F5P12259 2224 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 SPG11Q96JI7 2443 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 MICAL3Q7RTP6 2002 aa1.67□□□□□ -2.14
CD44-212ENST00000524922 UMODL1Q5DID0 1318 aa1.67□□□□□ -2.14
CD44-212ENST00000524922 FBN2P35556 2912 aa1.67□□□□□ -2.14
CD44-212ENST00000524922 RELNP78509 3460 aa1.67□□□□□ -2.14
CD44-212ENST00000524922 COL12A1Q99715 3063 aa1.67□□□□□ -2.14
CD44-212ENST00000524922 FLNCQ14315 2725 aa1.67□□□□□ -2.14
CD44-212ENST00000524922 A0A087WV48 116 aa1.67□□□□□ -2.14
CD44-212ENST00000524922 A0A0U1RQF3 1178 aa1.67□□□□□ -2.14
CD44-212ENST00000524922 A0A1B0GU03 582 aa1.67□□□□□ -2.14
CD44-212ENST00000524922 FAM172BPA6NC97 362 aa1.67□□□□□ -2.14
CD44-212ENST00000524922 HNRNPCL2B2RXH8 293 aa1.67□□□□□ -2.14
CD44-212ENST00000524922 ANHXE9PGG2 379 aa1.67□□□□□ -2.14
CD44-212ENST00000524922 F5H6K3 240 aa1.67□□□□□ -2.14
CD44-212ENST00000524922 CLGNO14967 610 aa1.67□□□□□ -2.14
CD44-212ENST00000524922 EDIL3O43854 480 aa1.67□□□□□ -2.14
CD44-212ENST00000524922 NDUFS7O75251 213 aa1.67□□□□□ -2.14
CD44-212ENST00000524922 STAM2O75886 525 aa1.67□□□□□ -2.14
CD44-212ENST00000524922 ADAP00813 363 aa1.67□□□□□ -2.14
CD44-212ENST00000524922 SERPINC1P01008 464 aa1.67□□□□□ -2.14
CD44-212ENST00000524922 STAG3L1P0CL83 205 aa1.67□□□□□ -2.14
CD44-212ENST00000524922 SRD5A1P18405 259 aa1.67□□□□□ -2.14
CD44-212ENST00000524922 CASTP20810 708 aaKnown RBP1.67□□□□□ -2.14
CD44-212ENST00000524922 CD72P21854 359 aa1.67□□□□□ -2.14
CD44-212ENST00000524922 HOXA9P31269 272 aa1.67□□□□□ -2.14
CD44-212ENST00000524922 HOXC13P31276 330 aa1.67□□□□□ -2.14
CD44-212ENST00000524922 SHMT1P34896 483 aa1.67□□□□□ -2.14
CD44-212ENST00000524922 KRT2P35908 639 aa1.67□□□□□ -2.14
CD44-212ENST00000524922 RPL3P39023 403 aaKnown RBP1.67□□□□□ -2.14
CD44-212ENST00000524922 PRKAA2P54646 552 aa1.67□□□□□ -2.14
CD44-212ENST00000524922 CCL23P55773 120 aa1.67□□□□□ -2.14
CD44-212ENST00000524922 LINC01547P58512 204 aaPredicted RBP1.67□□□□□ -2.14
CD44-212ENST00000524922 ICA1Q05084 483 aa1.67□□□□□ -2.14
CD44-212ENST00000524922 FOXO1Q12778 655 aa1.67□□□□□ -2.14
CD44-212ENST00000524922 CAPSQ13938 189 aa1.67□□□□□ -2.14
CD44-212ENST00000524922 CAMK1Q14012 370 aa1.67□□□□□ -2.14
CD44-212ENST00000524922 PPP2R5BQ15173 497 aa1.67□□□□□ -2.14
CD44-212ENST00000524922 CALCRLQ16602 461 aa1.67□□□□□ -2.14
CD44-212ENST00000524922 PTGISQ16647 500 aa1.67□□□□□ -2.14
CD44-212ENST00000524922 TWISTNBQ3B726 338 aaPredicted RBP1.67□□□□□ -2.14
CD44-212ENST00000524922 SOWAHCQ53LP3 525 aaPredicted RBP1.67□□□□□ -2.14
CD44-212ENST00000524922 ZNF484Q5JVG2 852 aa1.67□□□□□ -2.14
CD44-212ENST00000524922 SPDYCQ5MJ68 293 aa1.67□□□□□ -2.14
CD44-212ENST00000524922 PAPPA-AS1Q5QFB9 102 aa1.67□□□□□ -2.14
CD44-212ENST00000524922 PLA2G4FQ68DD2 849 aa1.67□□□□□ -2.14
CD44-212ENST00000524922 SNRNP48Q6IEG0 339 aaKnown RBP1.67□□□□□ -2.14
CD44-212ENST00000524922 C19orf48Q6RUI8 117 aa1.67□□□□□ -2.14
CD44-212ENST00000524922 ATG9AQ7Z3C6 839 aa1.67□□□□□ -2.14
CD44-212ENST00000524922 DSG4Q86SJ6 1040 aa1.67□□□□□ -2.14
CD44-212ENST00000524922 MYPOPQ86VE0 399 aaPredicted RBP1.67□□□□□ -2.14
CD44-212ENST00000524922 EPHX4Q8IUS5 362 aa1.67□□□□□ -2.14
CD44-212ENST00000524922 FOXRED2Q8IWF2 684 aa1.67□□□□□ -2.14
CD44-212ENST00000524922 WDR63Q8IWG1 891 aa1.67□□□□□ -2.14
CD44-212ENST00000524922 SFTPA2Q8IWL1 248 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms