RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 WDR1O75083 606 aa3.8□□□□□ -1.8
SKP1-212ENST00000523966 ZBTB11O95625 1053 aaPredicted RBP3.8□□□□□ -1.8
SKP1-212ENST00000523966 GGPS1O95749 300 aa3.8□□□□□ -1.8
SKP1-212ENST00000523966 FAM106CPP0CH98 169 aa3.8□□□□□ -1.8
SKP1-212ENST00000523966 MYOD1P15172 320 aa3.8□□□□□ -1.8
SKP1-212ENST00000523966 ZNF23P17027 643 aa3.8□□□□□ -1.8
SKP1-212ENST00000523966 THBS3P49746 956 aa3.8□□□□□ -1.8
SKP1-212ENST00000523966 ISL1P61371 349 aa3.8□□□□□ -1.8
SKP1-212ENST00000523966 SPOCK1Q08629 439 aa3.8□□□□□ -1.8
SKP1-212ENST00000523966 LETM2Q2VYF4 491 aa3.8□□□□□ -1.8
SKP1-212ENST00000523966 TCP11X2Q5H9J9 407 aa3.8□□□□□ -1.8
SKP1-212ENST00000523966 ALS2CLQ60I27 953 aa3.8□□□□□ -1.8
SKP1-212ENST00000523966 OR7E24Q6IFN5 339 aa3.8□□□□□ -1.8
SKP1-212ENST00000523966 ZNF534Q76KX8 674 aa3.8□□□□□ -1.8
SKP1-212ENST00000523966 EXOC3L1Q86VI1 746 aa3.8□□□□□ -1.8
SKP1-212ENST00000523966 TMPRSS12Q86WS5 348 aa3.8□□□□□ -1.8
SKP1-212ENST00000523966 TMEM173Q86WV6 379 aaPredicted RBP3.8□□□□□ -1.8
SKP1-212ENST00000523966 ODF3L1Q8IXM7 274 aa3.8□□□□□ -1.8
SKP1-212ENST00000523966 SAMD14Q8IZD0 417 aaPredicted RBP3.8□□□□□ -1.8
SKP1-212ENST00000523966 C1orf87Q8N0U7 546 aa3.8□□□□□ -1.8
SKP1-212ENST00000523966 MUC20Q8N307 709 aaPredicted RBP3.8□□□□□ -1.8
SKP1-212ENST00000523966 SMRP1Q8NCR6 262 aa3.8□□□□□ -1.8
SKP1-212ENST00000523966 SECISBP2LQ93073 1101 aaKnown RBP3.8□□□□□ -1.8
SKP1-212ENST00000523966 MTERF3Q96E29 417 aa3.8□□□□□ -1.8
SKP1-212ENST00000523966 IGSF21Q96ID5 467 aa3.8□□□□□ -1.8
SKP1-212ENST00000523966 FAM81BQ96LP2 452 aa3.8□□□□□ -1.8
SKP1-212ENST00000523966 PCYT2Q99447 389 aa3.8□□□□□ -1.8
SKP1-212ENST00000523966 WACQ9BTA9 647 aa3.8□□□□□ -1.8
SKP1-212ENST00000523966 IL25Q9H293 177 aa3.8□□□□□ -1.8
SKP1-212ENST00000523966 CCDC177Q9NQR7 707 aaPredicted RBP3.8□□□□□ -1.8
SKP1-212ENST00000523966 PCDHGB1Q9Y5G3 927 aa3.8□□□□□ -1.8
SKP1-212ENST00000523966 PCDHAC2Q9Y5I4 1007 aa3.8□□□□□ -1.8
SKP1-212ENST00000523966 TTC3P53804 2025 aa3.79□□□□□ -1.8
SKP1-212ENST00000523966 IGHV4OR15-8A0A075B7B6 117 aa3.79□□□□□ -1.8
SKP1-212ENST00000523966 TRBC2A0A5B9 178 aa3.79□□□□□ -1.8
SKP1-212ENST00000523966 CLEC18AA5D8T8 446 aa3.79□□□□□ -1.8
SKP1-212ENST00000523966 PLK4O00444 970 aa3.79□□□□□ -1.8
SKP1-212ENST00000523966 ACOT8O14734 319 aa3.79□□□□□ -1.8
SKP1-212ENST00000523966 DDNO94850 711 aaPredicted RBP3.79□□□□□ -1.8
SKP1-212ENST00000523966 AFPP02771 609 aaKnown RBP3.79□□□□□ -1.8
SKP1-212ENST00000523966 KRT19P08727 400 aa3.79□□□□□ -1.8
SKP1-212ENST00000523966 PFKFB1P16118 471 aa3.79□□□□□ -1.8
SKP1-212ENST00000523966 PSMC4P43686 418 aa3.79□□□□□ -1.8
SKP1-212ENST00000523966 PDLIM4P50479 330 aa3.79□□□□□ -1.8
SKP1-212ENST00000523966 ZNF75DP51815 510 aa3.79□□□□□ -1.8
SKP1-212ENST00000523966 FOXG1P55316 489 aaPredicted RBP3.79□□□□□ -1.8
SKP1-212ENST00000523966 RELQ04864 619 aaPredicted RBP3.79□□□□□ -1.8
SKP1-212ENST00000523966 KIF5AQ12840 1032 aa3.79□□□□□ -1.8
SKP1-212ENST00000523966 ALCAMQ13740 583 aa3.79□□□□□ -1.8
SKP1-212ENST00000523966 SNTB1Q13884 538 aaKnown RBP3.79□□□□□ -1.8
SKP1-212ENST00000523966 MELKQ14680 651 aa3.79□□□□□ -1.8
SKP1-212ENST00000523966 NR1D2Q14995 579 aa3.79□□□□□ -1.8
SKP1-212ENST00000523966 CBWD6Q4V339 395 aa3.79□□□□□ -1.8
SKP1-212ENST00000523966 FAM133BQ5BKY9 247 aaKnown RBP3.79□□□□□ -1.8
SKP1-212ENST00000523966 CBWD3Q5JTY5 395 aa3.79□□□□□ -1.8
SKP1-212ENST00000523966 ERMARDQ5T6L9 678 aa3.79□□□□□ -1.8
SKP1-212ENST00000523966 TICAM2Q86XR7 235 aa3.79□□□□□ -1.8
SKP1-212ENST00000523966 GBGT1Q8N5D6 347 aa3.79□□□□□ -1.8
SKP1-212ENST00000523966 Q8N9P0 234 aaPredicted RBP3.79□□□□□ -1.8
SKP1-212ENST00000523966 CLEC18CQ8NCF0 446 aa3.79□□□□□ -1.8
SKP1-212ENST00000523966 EXD1Q8NHP7 514 aa3.79□□□□□ -1.8
SKP1-212ENST00000523966 SPACA9Q96E40 222 aaPredicted RBP3.79□□□□□ -1.8
SKP1-212ENST00000523966 RADILQ96JH8 1075 aa3.79□□□□□ -1.8
SKP1-212ENST00000523966 MARK4Q96L34 752 aa3.79□□□□□ -1.8
SKP1-212ENST00000523966 GFI1Q99684 422 aa3.79□□□□□ -1.8
SKP1-212ENST00000523966 OPA3Q9H6K4 179 aa3.79□□□□□ -1.8
SKP1-212ENST00000523966 HHATLQ9HCP6 504 aa3.79□□□□□ -1.8
SKP1-212ENST00000523966 CD93Q9NPY3 652 aa3.79□□□□□ -1.8
SKP1-212ENST00000523966 PFDN4Q9NQP4 134 aa3.79□□□□□ -1.8
SKP1-212ENST00000523966 GDE1Q9NZC3 331 aa3.79□□□□□ -1.8
SKP1-212ENST00000523966 ANAPC2Q9UJX6 822 aa3.79□□□□□ -1.8
SKP1-212ENST00000523966 OR2W1Q9Y3N9 320 aa3.79□□□□□ -1.8
SKP1-212ENST00000523966 CGNL1Q0VF96 1302 aa3.78□□□□□ -1.8
SKP1-212ENST00000523966 IGKV2D-30A0A075B6S6 120 aa3.78□□□□□ -1.8
SKP1-212ENST00000523966 OR2M5A3KFT3 312 aa3.78□□□□□ -1.8
SKP1-212ENST00000523966 TSPY2A6NKD2 308 aa3.78□□□□□ -1.8
SKP1-212ENST00000523966 TMEM178BH3BS89 294 aa3.78□□□□□ -1.8
SKP1-212ENST00000523966 EIF3DO15371 548 aaKnown RBP eCLIP3.78□□□□□ -1.8
SKP1-212ENST00000523966 TRUB2O95900 331 aaKnown RBP3.78□□□□□ -1.8
SKP1-212ENST00000523966 TSPY3P0CV98 308 aa3.78□□□□□ -1.8
SKP1-212ENST00000523966 TSPY8P0CW00 308 aa3.78□□□□□ -1.8
SKP1-212ENST00000523966 CDH1P12830 882 aa3.78□□□□□ -1.8
SKP1-212ENST00000523966 TNFRSF8P28908 595 aa3.78□□□□□ -1.8
SKP1-212ENST00000523966 CSE1LP55060 971 aaKnown RBP3.78□□□□□ -1.8
SKP1-212ENST00000523966 NANOS2P60321 138 aaKnown RBP3.78□□□□□ -1.8
SKP1-212ENST00000523966 TSPY1Q01534 308 aa3.78□□□□□ -1.8
SKP1-212ENST00000523966 ASIC2Q16515 512 aa3.78□□□□□ -1.8
SKP1-212ENST00000523966 KYNUQ16719 465 aa3.78□□□□□ -1.8
SKP1-212ENST00000523966 SETMARQ53H47 684 aaPredicted RBP3.78□□□□□ -1.8
SKP1-212ENST00000523966 PDSS1Q5T2R2 415 aa3.78□□□□□ -1.8
SKP1-212ENST00000523966 GCNT6Q5T4J0 391 aa3.78□□□□□ -1.8
SKP1-212ENST00000523966 C6orf163Q5TEZ5 329 aa3.78□□□□□ -1.8
SKP1-212ENST00000523966 LRCH2Q5VUJ6 765 aa3.78□□□□□ -1.8
SKP1-212ENST00000523966 KRT39Q6A163 491 aa3.78□□□□□ -1.8
SKP1-212ENST00000523966 FAM109BQ6ICB4 259 aaPredicted RBP3.78□□□□□ -1.8
SKP1-212ENST00000523966 TMEM211Q6ICI0 200 aa3.78□□□□□ -1.8
SKP1-212ENST00000523966 RPUSD3Q6P087 351 aaKnown RBP3.78□□□□□ -1.8
SKP1-212ENST00000523966 GFRALQ6UXV0 394 aa3.78□□□□□ -1.8
SKP1-212ENST00000523966 ASB18Q6ZVZ8 466 aa3.78□□□□□ -1.8
SKP1-212ENST00000523966 TUBA1AQ71U36 451 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms