RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 AMZ2Q86W34 360 aa14.88□□□□□ -0.03
CSMD1-207ENST00000520451 CCDC50Q8IVM0 306 aa14.88□□□□□ -0.03
CSMD1-207ENST00000520451 RASGEF1AQ8N9B8 481 aa14.88□□□□□ -0.03
CSMD1-207ENST00000520451 GALNT6Q8NCL4 622 aa14.88□□□□□ -0.03
CSMD1-207ENST00000520451 DDHD1Q8NEL9 900 aa14.88□□□□□ -0.03
CSMD1-207ENST00000520451 DTX3LQ8TDB6 740 aa14.88□□□□□ -0.03
CSMD1-207ENST00000520451 APOBEC4Q8WW27 367 aaKnown RBP14.88□□□□□ -0.03
CSMD1-207ENST00000520451 STAMBPL1Q96FJ0 436 aa14.88□□□□□ -0.03
CSMD1-207ENST00000520451 QKIQ96PU8 341 aaKnown RBP eCLIP14.88□□□□□ -0.037e-33■■■■■ 356
CSMD1-207ENST00000520451 VAT1Q99536 393 aa14.88□□□□□ -0.03
CSMD1-207ENST00000520451 FSD1LQ9BXM9 530 aa14.88□□□□□ -0.03
CSMD1-207ENST00000520451 TSPY26PQ9H489 355 aa14.88□□□□□ -0.03
CSMD1-207ENST00000520451 ZNF71Q9NQZ8 489 aaPredicted RBP14.88□□□□□ -0.03
CSMD1-207ENST00000520451 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.88□□□□□ -0.03
CSMD1-207ENST00000520451 EPHA6Q9UF33 1036 aa14.88□□□□□ -0.03
CSMD1-207ENST00000520451 RSPH14Q9UHP6 348 aa14.88□□□□□ -0.03
CSMD1-207ENST00000520451 LNPEPQ9UIQ6 1025 aa14.88□□□□□ -0.03
CSMD1-207ENST00000520451 CROTQ9UKG9 612 aa14.88□□□□□ -0.03
CSMD1-207ENST00000520451 PKP3Q9Y446 797 aa14.88□□□□□ -0.03
CSMD1-207ENST00000520451 OR2AG2A6NM03 316 aa14.87□□□□□ -0.03
CSMD1-207ENST00000520451 POP7O75817 140 aaKnown RBP14.87□□□□□ -0.03
CSMD1-207ENST00000520451 ZRANB2O95218 330 aaKnown RBP eCLIP14.87□□□□□ -0.03
CSMD1-207ENST00000520451 F8A1P23610 371 aa14.87□□□□□ -0.03
CSMD1-207ENST00000520451 CA5AP35218 305 aa14.87□□□□□ -0.03
CSMD1-207ENST00000520451 MAGEA1P43355 309 aa14.87□□□□□ -0.03
CSMD1-207ENST00000520451 MARCKSL1P49006 195 aa14.87□□□□□ -0.03
CSMD1-207ENST00000520451 CTSCP53634 463 aa14.87□□□□□ -0.03
CSMD1-207ENST00000520451 HADHBP55084 474 aaKnown RBP14.87□□□□□ -0.03
CSMD1-207ENST00000520451 PPP1CAP62136 330 aa14.87□□□□□ -0.03
CSMD1-207ENST00000520451 DMPKQ09013 629 aa14.87□□□□□ -0.03
CSMD1-207ENST00000520451 MPP3Q13368 585 aa14.87□□□□□ -0.03
CSMD1-207ENST00000520451 ITGA9Q13797 1035 aa14.87□□□□□ -0.03
CSMD1-207ENST00000520451 SKOR2Q2VWA4 1001 aaPredicted RBP14.87□□□□□ -0.03
CSMD1-207ENST00000520451 CRTC2Q53ET0 693 aaPredicted RBP14.87□□□□□ -0.03
CSMD1-207ENST00000520451 GPRC6AQ5T6X5 926 aa14.87□□□□□ -0.03
CSMD1-207ENST00000520451 TMEM220Q6QAJ8 160 aa14.87□□□□□ -0.03
CSMD1-207ENST00000520451 FAM83HQ6ZRV2 1179 aaPredicted RBP14.87□□□□□ -0.03
CSMD1-207ENST00000520451 KATNAL2Q8IYT4 538 aa14.87□□□□□ -0.03
CSMD1-207ENST00000520451 GPR150Q8NGU9 434 aa14.87□□□□□ -0.03
CSMD1-207ENST00000520451 KLHL6Q8WZ60 621 aa14.87□□□□□ -0.03
CSMD1-207ENST00000520451 EPN3Q9H201 632 aa14.87□□□□□ -0.03
CSMD1-207ENST00000520451 PSMD13Q9UNM6 376 aa14.87□□□□□ -0.03
CSMD1-207ENST00000520451 PCDHB3Q9Y5E6 796 aa14.87□□□□□ -0.03
CSMD1-207ENST00000520451 HACD1B0YJ81 288 aa14.86□□□□□ -0.03
CSMD1-207ENST00000520451 GAPDHSO14556 408 aaPredicted RBP14.86□□□□□ -0.03
CSMD1-207ENST00000520451 SPAG6O75602 509 aa14.86□□□□□ -0.03
CSMD1-207ENST00000520451 FGF5P12034 268 aa14.86□□□□□ -0.03
CSMD1-207ENST00000520451 NELFEP18615 380 aaKnown RBP14.86□□□□□ -0.03
CSMD1-207ENST00000520451 FECHP22830 423 aa14.86□□□□□ -0.03
CSMD1-207ENST00000520451 PBLDP30039 288 aaPredicted RBP14.86□□□□□ -0.03
CSMD1-207ENST00000520451 AKT1P31749 480 aa14.86□□□□□ -0.03
CSMD1-207ENST00000520451 TBX2Q13207 712 aaPredicted RBP14.86□□□□□ -0.03
CSMD1-207ENST00000520451 NFE2L1Q14494 772 aa14.86□□□□□ -0.03
CSMD1-207ENST00000520451 PLCL1Q15111 1095 aa14.86□□□□□ -0.03
CSMD1-207ENST00000520451 RPE65Q16518 533 aa14.86□□□□□ -0.03
CSMD1-207ENST00000520451 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.86□□□□□ -0.03
CSMD1-207ENST00000520451 CYB5D1Q6P9G0 228 aa14.86□□□□□ -0.03
CSMD1-207ENST00000520451 PPP1R3BQ86XI6 285 aa14.86□□□□□ -0.03
CSMD1-207ENST00000520451 RCOR2Q8IZ40 523 aa14.86□□□□□ -0.03
CSMD1-207ENST00000520451 ABHD17AQ96GS6 310 aa14.86□□□□□ -0.03
CSMD1-207ENST00000520451 RBM41Q96IZ5 413 aaKnown RBP14.86□□□□□ -0.03
CSMD1-207ENST00000520451 RAB33BQ9H082 229 aa14.86□□□□□ -0.03
CSMD1-207ENST00000520451 TRHDEQ9UKU6 1024 aa14.86□□□□□ -0.03
CSMD1-207ENST00000520451 KCTD3Q9Y597 815 aa14.86□□□□□ -0.03
CSMD1-207ENST00000520451 ZNF106Q9H2Y7 1883 aaKnown RBP14.86□□□□□ -0.03
CSMD1-207ENST00000520451 COL12A1Q99715 3063 aa14.86□□□□□ -0.03
CSMD1-207ENST00000520451 H7C0C1 242 aa14.85□□□□□ -0.03
CSMD1-207ENST00000520451 STX7O15400 261 aaKnown RBP14.85□□□□□ -0.03
CSMD1-207ENST00000520451 KATNA1O75449 491 aa14.85□□□□□ -0.03
CSMD1-207ENST00000520451 AGTP01019 485 aa14.85□□□□□ -0.03
CSMD1-207ENST00000520451 MSH3P20585 1137 aa14.85□□□□□ -0.03
CSMD1-207ENST00000520451 ATP5OP48047 213 aa14.85□□□□□ -0.03
CSMD1-207ENST00000520451 TUBB3Q13509 450 aa14.85□□□□□ -0.03
CSMD1-207ENST00000520451 SEPT6Q14141 434 aa14.85□□□□□ -0.03
CSMD1-207ENST00000520451 ERV3-1Q14264 604 aa14.85□□□□□ -0.03
CSMD1-207ENST00000520451 PTPRCAPQ14761 206 aa14.85□□□□□ -0.03
CSMD1-207ENST00000520451 LONRF2Q1L5Z9 754 aa14.85□□□□□ -0.03
CSMD1-207ENST00000520451 FNBP1LQ5T0N5 605 aa14.85□□□□□ -0.03
CSMD1-207ENST00000520451 CCDC181Q5TID7 509 aa14.85□□□□□ -0.03
CSMD1-207ENST00000520451 C11orf63Q6NUN7 778 aa14.85□□□□□ -0.03
CSMD1-207ENST00000520451 KLHL35Q6PF15 583 aa14.85□□□□□ -0.03
CSMD1-207ENST00000520451 DET1Q7L5Y6 550 aa14.85□□□□□ -0.03
CSMD1-207ENST00000520451 BEND7Q8N7W2 519 aaPredicted RBP14.85□□□□□ -0.03
CSMD1-207ENST00000520451 SIDT2Q8NBJ9 832 aaKnown RBP14.85□□□□□ -0.03
CSMD1-207ENST00000520451 UBXN4Q92575 508 aa14.85□□□□□ -0.03
CSMD1-207ENST00000520451 KRT35Q92764 455 aa14.85□□□□□ -0.03
CSMD1-207ENST00000520451 FICDQ9BVA6 458 aa14.85□□□□□ -0.03
CSMD1-207ENST00000520451 HEMGNQ9BXL5 484 aa14.85□□□□□ -0.03
CSMD1-207ENST00000520451 GBA3Q9H227 469 aa14.85□□□□□ -0.03
CSMD1-207ENST00000520451 C10orf88Q9H8K7 445 aa14.85□□□□□ -0.03
CSMD1-207ENST00000520451 PDE7BQ9NP56 450 aa14.85□□□□□ -0.03
CSMD1-207ENST00000520451 IMP3Q9NV31 184 aaKnown RBP14.85□□□□□ -0.03
CSMD1-207ENST00000520451 SMOXQ9NWM0 555 aa14.85□□□□□ -0.03
CSMD1-207ENST00000520451 ANAPC2Q9UJX6 822 aa14.85□□□□□ -0.03
CSMD1-207ENST00000520451 TFR2Q9UP52 801 aa14.85□□□□□ -0.03
CSMD1-207ENST00000520451 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.85□□□□□ -0.03
CSMD1-207ENST00000520451 ARL5AQ9Y689 179 aa14.85□□□□□ -0.03
CSMD1-207ENST00000520451 DNMT3AQ9Y6K1 912 aaPredicted RBP14.85□□□□□ -0.03
CSMD1-207ENST00000520451 IGHV5-51A0A0C4DH38 117 aa14.84□□□□□ -0.03
CSMD1-207ENST00000520451 GOLGA6L3A6NEY3 463 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms