RNA–Protein interactions for RNA: ENST00000519141.5

SPIDR-209, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,699 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-209ENST00000519141 KCNC1P48547 511 aa12.2□□□□□ -0.46
SPIDR-209ENST00000519141 ZBTB16Q05516 673 aa12.2□□□□□ -0.46
SPIDR-209ENST00000519141 DMTNQ08495 405 aa12.2□□□□□ -0.46
SPIDR-209ENST00000519141 KHDC1Q4VXA5 237 aaKnown RBP12.2□□□□□ -0.46
SPIDR-209ENST00000519141 RAB44Q7Z6P3 723 aaPredicted RBP12.2□□□□□ -0.46
SPIDR-209ENST00000519141 ADAMTSL2Q86TH1 951 aa12.2□□□□□ -0.46
SPIDR-209ENST00000519141 RFWD2Q8NHY2 731 aa12.2□□□□□ -0.46
SPIDR-209ENST00000519141 C10orf82Q8WW14 230 aa12.2□□□□□ -0.46
SPIDR-209ENST00000519141 PHF21BQ96EK2 531 aa12.2□□□□□ -0.46
SPIDR-209ENST00000519141 TMEM237Q96Q45 408 aa12.2□□□□□ -0.46
SPIDR-209ENST00000519141 SORT1Q99523 831 aa12.2□□□□□ -0.46
SPIDR-209ENST00000519141 DRC3Q9H069 523 aa12.2□□□□□ -0.46
SPIDR-209ENST00000519141 SLC6A17Q9H1V8 727 aa12.2□□□□□ -0.46
SPIDR-209ENST00000519141 MARCOQ9UEW3 520 aaPredicted RBP12.2□□□□□ -0.46
SPIDR-209ENST00000519141 TSR3Q9UJK0 312 aaKnown RBP12.2□□□□□ -0.46
SPIDR-209ENST00000519141 DCTN4Q9UJW0 460 aa12.2□□□□□ -0.46
SPIDR-209ENST00000519141 IKZF3Q9UKT9 509 aa12.2□□□□□ -0.46
SPIDR-209ENST00000519141 NDRG2Q9UN36 371 aaKnown RBP12.2□□□□□ -0.46
SPIDR-209ENST00000519141 DUSP12Q9UNI6 340 aa12.2□□□□□ -0.46
SPIDR-209ENST00000519141 USH1CQ9Y6N9 552 aa12.2□□□□□ -0.46
SPIDR-209ENST00000519141 ZNF318Q5VUA4 2279 aa12.2□□□□□ -0.46
SPIDR-209ENST00000519141 MYO15AQ9UKN7 3530 aa12.2□□□□□ -0.46
SPIDR-209ENST00000519141 IGLON5A6NGN9 336 aa12.19□□□□□ -0.46
SPIDR-209ENST00000519141 SHISA7A6NL88 538 aa12.19□□□□□ -0.46
SPIDR-209ENST00000519141 K7ESM1 405 aa12.19□□□□□ -0.46
SPIDR-209ENST00000519141 EIF3FO00303 357 aaPredicted RBP12.19□□□□□ -0.46
SPIDR-209ENST00000519141 KPNA5O15131 536 aa12.19□□□□□ -0.46
SPIDR-209ENST00000519141 SNUPNO95149 360 aaKnown RBP12.19□□□□□ -0.46
SPIDR-209ENST00000519141 KITP10721 976 aa12.19□□□□□ -0.46
SPIDR-209ENST00000519141 ENO3P13929 434 aaPredicted RBP12.19□□□□□ -0.46
SPIDR-209ENST00000519141 CD72P21854 359 aa12.19□□□□□ -0.46
SPIDR-209ENST00000519141 ARRB2P32121 409 aa12.19□□□□□ -0.46
SPIDR-209ENST00000519141 SFSWAPQ12872 951 aaKnown RBP12.19□□□□□ -0.46
SPIDR-209ENST00000519141 IFT88Q13099 833 aa12.19□□□□□ -0.46
SPIDR-209ENST00000519141 ACSBG2Q5FVE4 666 aa12.19□□□□□ -0.46
SPIDR-209ENST00000519141 ZNF648Q5T619 568 aaPredicted RBP12.19□□□□□ -0.46
SPIDR-209ENST00000519141 FRA10AC1Q70Z53 315 aa12.19□□□□□ -0.46
SPIDR-209ENST00000519141 GPSM1Q86YR5 675 aa12.19□□□□□ -0.46
SPIDR-209ENST00000519141 WDR75Q8IWA0 830 aaKnown RBP12.19□□□□□ -0.46
SPIDR-209ENST00000519141 PELI3Q8N2H9 469 aa12.19□□□□□ -0.46
SPIDR-209ENST00000519141 PTGR2Q8N8N7 351 aaPredicted RBP12.19□□□□□ -0.46
SPIDR-209ENST00000519141 PIWIL2Q8TC59 973 aaKnown RBP12.19□□□□□ -0.46
SPIDR-209ENST00000519141 FUBP1Q96AE4 644 aaKnown RBP12.19□□□□□ -0.46
SPIDR-209ENST00000519141 FAM131CQ96AQ9 280 aa12.19□□□□□ -0.46
SPIDR-209ENST00000519141 SIPA1Q96FS4 1042 aa12.19□□□□□ -0.46
SPIDR-209ENST00000519141 SIKE1Q9BRV8 207 aa12.19□□□□□ -0.46
SPIDR-209ENST00000519141 CD248Q9HCU0 757 aa12.19□□□□□ -0.46
SPIDR-209ENST00000519141 MMP17Q9ULZ9 603 aa12.19□□□□□ -0.46
SPIDR-209ENST00000519141 TMCO1Q9UM00 188 aa12.19□□□□□ -0.46
SPIDR-209ENST00000519141 ANKRD12Q6UB98 2062 aa12.19□□□□□ -0.46
SPIDR-209ENST00000519141 VPS13AQ96RL7 3174 aa12.19□□□□□ -0.46
SPIDR-209ENST00000519141 OR2AG2A6NM03 316 aa12.19□□□□□ -0.46
SPIDR-209ENST00000519141 PLRG1O43660 514 aaKnown RBP12.19□□□□□ -0.46
SPIDR-209ENST00000519141 MTHFD2P13995 350 aa12.19□□□□□ -0.46
SPIDR-209ENST00000519141 IMPDH1P20839 514 aa12.19□□□□□ -0.46
SPIDR-209ENST00000519141 AOAHP28039 575 aa12.19□□□□□ -0.46
SPIDR-209ENST00000519141 CCR7P32248 378 aa12.19□□□□□ -0.46
SPIDR-209ENST00000519141 ARFIP2P53365 341 aa12.19□□□□□ -0.46
SPIDR-209ENST00000519141 HERVK_113P63132 956 aa12.19□□□□□ -0.46
SPIDR-209ENST00000519141 TMEM115Q12893 351 aaPredicted RBP12.19□□□□□ -0.46
SPIDR-209ENST00000519141 PRKAA1Q13131 559 aa12.19□□□□□ -0.46
SPIDR-209ENST00000519141 GTF2H3Q13889 308 aa12.19□□□□□ -0.46
SPIDR-209ENST00000519141 BOP1Q14137 746 aaKnown RBP12.19□□□□□ -0.46
SPIDR-209ENST00000519141 PFKFB4Q16877 469 aa12.19□□□□□ -0.46
SPIDR-209ENST00000519141 ARL13AQ5H913 290 aaPredicted RBP12.19□□□□□ -0.46
SPIDR-209ENST00000519141 KIAA1161Q6NSJ0 714 aa12.19□□□□□ -0.46
SPIDR-209ENST00000519141 C6orf89Q6UWU4 347 aa12.19□□□□□ -0.46
SPIDR-209ENST00000519141 ZNF852Q6ZMS4 543 aa12.19□□□□□ -0.46
SPIDR-209ENST00000519141 USP30Q70CQ3 517 aa12.19□□□□□ -0.46
SPIDR-209ENST00000519141 KBTBD6Q86V97 674 aa12.19□□□□□ -0.46
SPIDR-209ENST00000519141 FBXO39Q8N4B4 442 aa12.19□□□□□ -0.46
SPIDR-209ENST00000519141 RASGEF1AQ8N9B8 481 aa12.19□□□□□ -0.46
SPIDR-209ENST00000519141 OR14C36Q8NHC7 312 aa12.19□□□□□ -0.46
SPIDR-209ENST00000519141 ELMO1Q92556 727 aa12.19□□□□□ -0.46
SPIDR-209ENST00000519141 L3HYPDHQ96EM0 354 aa12.19□□□□□ -0.46
SPIDR-209ENST00000519141 CNDP1Q96KN2 507 aa12.19□□□□□ -0.46
SPIDR-209ENST00000519141 RMDN2Q96LZ7 410 aa12.19□□□□□ -0.46
SPIDR-209ENST00000519141 TMEM120AQ9BXJ8 343 aa12.19□□□□□ -0.46
SPIDR-209ENST00000519141 ERVK-6Q9BXR3 956 aa12.19□□□□□ -0.46
SPIDR-209ENST00000519141 FAM126AQ9BYI3 521 aaPredicted RBP12.19□□□□□ -0.46
SPIDR-209ENST00000519141 ILKAPQ9H0C8 392 aaPredicted RBP12.19□□□□□ -0.46
SPIDR-209ENST00000519141 ACSS2Q9NR19 701 aa12.19□□□□□ -0.46
SPIDR-209ENST00000519141 KCNK4Q9NYG8 393 aa12.19□□□□□ -0.46
SPIDR-209ENST00000519141 RAPGEFL1Q9UHV5 662 aa12.19□□□□□ -0.46
SPIDR-209ENST00000519141 MBD1Q9UIS9 605 aaPredicted RBP12.19□□□□□ -0.46
SPIDR-209ENST00000519141 CNOT6Q9ULM6 557 aaKnown RBP12.19□□□□□ -0.46
SPIDR-209ENST00000519141 FZD4Q9ULV1 537 aa12.19□□□□□ -0.46
SPIDR-209ENST00000519141 NCKAP1Q9Y2A7 1128 aa12.19□□□□□ -0.46
SPIDR-209ENST00000519141 RAP2CQ9Y3L5 183 aa12.19□□□□□ -0.46
SPIDR-209ENST00000519141 CACNA1HO95180 2353 aa12.18□□□□□ -0.46
SPIDR-209ENST00000519141 PRR23AA6NEV1 266 aa12.18□□□□□ -0.46
SPIDR-209ENST00000519141 SGTAO43765 313 aa12.18□□□□□ -0.46
SPIDR-209ENST00000519141 SNX2O60749 519 aa12.18□□□□□ -0.46
SPIDR-209ENST00000519141 ATG13O75143 517 aa12.18□□□□□ -0.46
SPIDR-209ENST00000519141 S100BP04271 92 aaPredicted RBP12.18□□□□□ -0.46
SPIDR-209ENST00000519141 PCCBP05166 539 aa12.18□□□□□ -0.46
SPIDR-209ENST00000519141 CHRNGP07510 517 aa12.18□□□□□ -0.46
SPIDR-209ENST00000519141 ACADMP11310 421 aa12.18□□□□□ -0.46
SPIDR-209ENST00000519141 PRLHRP49683 370 aa12.18□□□□□ -0.46
SPIDR-209ENST00000519141 ADPRHP54922 357 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms