RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 EGFLAMQ63HQ2 1017 aa12.35□□□□□ -0.43
COL11A1-210ENST00000512756 FAM171BQ6P995 826 aa12.35□□□□□ -0.43
COL11A1-210ENST00000512756 MOB2Q70IA6 237 aa12.35□□□□□ -0.43
COL11A1-210ENST00000512756 PHYKPLQ8IUZ5 450 aa12.35□□□□□ -0.43
COL11A1-210ENST00000512756 CMASQ8NFW8 434 aaPredicted RBP12.35□□□□□ -0.43
COL11A1-210ENST00000512756 VANGL1Q8TAA9 524 aaPredicted RBP12.35□□□□□ -0.43
COL11A1-210ENST00000512756 SLC38A4Q969I6 547 aa12.35□□□□□ -0.43
COL11A1-210ENST00000512756 PLD4Q96BZ4 506 aa12.35□□□□□ -0.43
COL11A1-210ENST00000512756 NMUR1Q9HB89 426 aa12.35□□□□□ -0.43
COL11A1-210ENST00000512756 TRIM39Q9HCM9 518 aa12.35□□□□□ -0.43
COL11A1-210ENST00000512756 FAM240BA0A1B0GVZ2 78 aa12.34□□□□□ -0.43
COL11A1-210ENST00000512756 FAM92AA1XBS5 289 aa12.34□□□□□ -0.43
COL11A1-210ENST00000512756 PRNPP04156 253 aa12.34□□□□□ -0.43
COL11A1-210ENST00000512756 SELPP16109 830 aa12.34□□□□□ -0.43
COL11A1-210ENST00000512756 GALK1P51570 392 aa12.34□□□□□ -0.43
COL11A1-210ENST00000512756 MTTPP55157 894 aa12.34□□□□□ -0.43
COL11A1-210ENST00000512756 MYBPC1Q00872 1141 aa12.34□□□□□ -0.43
COL11A1-210ENST00000512756 DPY19L1Q2PZI1 675 aa12.34□□□□□ -0.43
COL11A1-210ENST00000512756 ATP13A5Q4VNC0 1218 aa12.34□□□□□ -0.43
COL11A1-210ENST00000512756 TRMT10BQ6PF06 316 aaKnown RBP12.34□□□□□ -0.43
COL11A1-210ENST00000512756 RTL4Q6ZR62 310 aa12.34□□□□□ -0.43
COL11A1-210ENST00000512756 TMEM27Q9HBJ8 222 aa12.34□□□□□ -0.43
COL11A1-210ENST00000512756 C1orf109Q9NX04 203 aa12.34□□□□□ -0.43
COL11A1-210ENST00000512756 DUSP11O75319 330 aaKnown RBP12.34□□□□□ -0.43
COL11A1-210ENST00000512756 VNN1O95497 513 aa12.34□□□□□ -0.43
COL11A1-210ENST00000512756 POP4O95707 220 aaKnown RBP12.34□□□□□ -0.43
COL11A1-210ENST00000512756 DNTTP04053 509 aa12.34□□□□□ -0.43
COL11A1-210ENST00000512756 WDR4P57081 412 aaKnown RBP12.34□□□□□ -0.43
COL11A1-210ENST00000512756 CHST15Q7LFX5 561 aaPredicted RBP12.34□□□□□ -0.43
COL11A1-210ENST00000512756 TRPV1Q8NER1 839 aa12.34□□□□□ -0.43
COL11A1-210ENST00000512756 HAPLN3Q96S86 360 aa12.34□□□□□ -0.43
COL11A1-210ENST00000512756 NECTIN3Q9NQS3 549 aa12.34□□□□□ -0.43
COL11A1-210ENST00000512756 ACSS2Q9NR19 701 aa12.34□□□□□ -0.43
COL11A1-210ENST00000512756 EURLQ9NYK6 297 aa12.34□□□□□ -0.43
COL11A1-210ENST00000512756 AQP12BA6NM10 295 aa12.34□□□□□ -0.43
COL11A1-210ENST00000512756 BTN3A3O00478 584 aa12.34□□□□□ -0.43
COL11A1-210ENST00000512756 CHIT1Q13231 466 aa12.34□□□□□ -0.43
COL11A1-210ENST00000512756 IL18R1Q13478 541 aa12.34□□□□□ -0.43
COL11A1-210ENST00000512756 RFWD3Q6PCD5 774 aa12.34□□□□□ -0.43
COL11A1-210ENST00000512756 SERPINA9Q86WD7 417 aa12.34□□□□□ -0.43
COL11A1-210ENST00000512756 AQP12AQ8IXF9 295 aa12.34□□□□□ -0.43
COL11A1-210ENST00000512756 RGL4Q8IZJ4 473 aa12.34□□□□□ -0.43
COL11A1-210ENST00000512756 C2orf15Q8WU43 125 aaKnown RBP12.34□□□□□ -0.43
COL11A1-210ENST00000512756 CALML5Q9NZT1 146 aa12.34□□□□□ -0.43
COL11A1-210ENST00000512756 DEC1Q9P2X7 70 aa12.34□□□□□ -0.43
COL11A1-210ENST00000512756 ZNF214Q9UL59 606 aaPredicted RBP12.34□□□□□ -0.43
COL11A1-210ENST00000512756 PEX16Q9Y5Y5 336 aa12.34□□□□□ -0.43
COL11A1-210ENST00000512756 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.34□□□□□ -0.43
COL11A1-210ENST00000512756 SLC30A4O14863 429 aa12.34□□□□□ -0.43
COL11A1-210ENST00000512756 CAPN15O75808 1086 aa12.34□□□□□ -0.43
COL11A1-210ENST00000512756 METTL18O95568 372 aa12.34□□□□□ -0.43
COL11A1-210ENST00000512756 IDSP22304 550 aa12.34□□□□□ -0.43
COL11A1-210ENST00000512756 RFTN1Q14699 578 aaPredicted RBP12.34□□□□□ -0.43
COL11A1-210ENST00000512756 RAB43Q86YS6 212 aa12.34□□□□□ -0.43
COL11A1-210ENST00000512756 TMC8Q8IU68 726 aa12.34□□□□□ -0.43
COL11A1-210ENST00000512756 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.34□□□□□ -0.43
COL11A1-210ENST00000512756 SLC43A3Q8NBI5 491 aa12.34□□□□□ -0.43
COL11A1-210ENST00000512756 HPS1Q92902 700 aa12.34□□□□□ -0.43
COL11A1-210ENST00000512756 CD320Q9NPF0 282 aa12.34□□□□□ -0.43
COL11A1-210ENST00000512756 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.34□□□□□ -0.43
COL11A1-210ENST00000512756 GPC6Q9Y625 555 aaPredicted RBP12.34□□□□□ -0.43
COL11A1-210ENST00000512756 RAP2AP10114 183 aa12.33□□□□□ -0.43
COL11A1-210ENST00000512756 LAMP2P13473 410 aa12.33□□□□□ -0.43
COL11A1-210ENST00000512756 LIX1Q8N485 282 aa12.33□□□□□ -0.43
COL11A1-210ENST00000512756 OR7D4Q8NG98 312 aa12.33□□□□□ -0.43
COL11A1-210ENST00000512756 SLC13A3Q8WWT9 602 aa12.33□□□□□ -0.43
COL11A1-210ENST00000512756 ERLEC1Q96DZ1 483 aa12.33□□□□□ -0.43
COL11A1-210ENST00000512756 FEM1CQ96JP0 617 aa12.33□□□□□ -0.43
COL11A1-210ENST00000512756 CCDC177Q9NQR7 707 aaPredicted RBP12.33□□□□□ -0.43
COL11A1-210ENST00000512756 GALNT8Q9NY28 637 aa12.33□□□□□ -0.43
COL11A1-210ENST00000512756 CNTN3Q9P232 1028 aa12.33□□□□□ -0.43
COL11A1-210ENST00000512756 MAN2B2Q9Y2E5 1009 aa12.33□□□□□ -0.43
COL11A1-210ENST00000512756 ZFP37Q9Y6Q3 630 aaPredicted RBP12.33□□□□□ -0.43
COL11A1-210ENST00000512756 ABHD14A-ACY1A0A1B0GW23 586 aa12.33□□□□□ -0.44
COL11A1-210ENST00000512756 FAM234BA2RU67 622 aa12.33□□□□□ -0.44
COL11A1-210ENST00000512756 MAGEB17A8MXT2 336 aa12.33□□□□□ -0.44
COL11A1-210ENST00000512756 CXCR6O00574 342 aa12.33□□□□□ -0.44
COL11A1-210ENST00000512756 TEX28O15482 410 aa12.33□□□□□ -0.44
COL11A1-210ENST00000512756 ZBTB6Q15916 424 aa12.33□□□□□ -0.44
COL11A1-210ENST00000512756 PEX5LQ8IYB4 626 aa12.33□□□□□ -0.44
COL11A1-210ENST00000512756 FUBP3Q96I24 572 aaKnown RBP eCLIP12.33□□□□□ -0.44
COL11A1-210ENST00000512756 ATG10Q9H0Y0 220 aa12.33□□□□□ -0.44
COL11A1-210ENST00000512756 MCUBQ9NWR8 336 aa12.33□□□□□ -0.44
COL11A1-210ENST00000512756 MTRRQ9UBK8 725 aa12.33□□□□□ -0.44
COL11A1-210ENST00000512756 DNAJB9Q9UBS3 223 aa12.33□□□□□ -0.44
COL11A1-210ENST00000512756 GTF2IRD1Q9UHL9 959 aa12.33□□□□□ -0.44
COL11A1-210ENST00000512756 PCDHGC4Q9Y5F7 938 aa12.33□□□□□ -0.44
COL11A1-210ENST00000512756 PCDHGA11Q9Y5H2 935 aa12.33□□□□□ -0.44
COL11A1-210ENST00000512756 PTPRJQ12913 1337 aa12.33□□□□□ -0.44
COL11A1-210ENST00000512756 CAMTA1Q9Y6Y1 1673 aa12.33□□□□□ -0.44
COL11A1-210ENST00000512756 MYBPHLA2RUH7 354 aa12.33□□□□□ -0.44
COL11A1-210ENST00000512756 EME2A4GXA9 379 aaPredicted RBP12.33□□□□□ -0.44
COL11A1-210ENST00000512756 CLDN25C9JDP6 229 aa12.33□□□□□ -0.44
COL11A1-210ENST00000512756 MCIDASD6RGH6 385 aa12.33□□□□□ -0.44
COL11A1-210ENST00000512756 COL6A1P12109 1028 aa12.33□□□□□ -0.44
COL11A1-210ENST00000512756 SLC7A1P30825 629 aa12.33□□□□□ -0.44
COL11A1-210ENST00000512756 FLT3LGP49771 235 aa12.33□□□□□ -0.44
COL11A1-210ENST00000512756 AQP4P55087 323 aa12.33□□□□□ -0.44
COL11A1-210ENST00000512756 NOGQ13253 232 aa12.33□□□□□ -0.44
COL11A1-210ENST00000512756 SF1Q15637 639 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms