RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 A0A0A6YYK5 440 aaPredicted RBP12.32□□□□□ -0.44
VEGFA-216ENST00000512683 KRT1P04264 644 aa12.32□□□□□ -0.44
VEGFA-216ENST00000512683 ZNF28P17035 718 aa12.32□□□□□ -0.44
VEGFA-216ENST00000512683 RPL10P27635 214 aaKnown RBP12.32□□□□□ -0.44
VEGFA-216ENST00000512683 CDKN2BP42772 138 aa12.32□□□□□ -0.44
VEGFA-216ENST00000512683 LEPRP48357 1165 aaKnown RBP12.32□□□□□ -0.44
VEGFA-216ENST00000512683 SEPHS1P49903 392 aa12.32□□□□□ -0.44
VEGFA-216ENST00000512683 RPS15P62841 145 aaKnown RBP12.32□□□□□ -0.44
VEGFA-216ENST00000512683 SEMA5AQ13591 1074 aa12.32□□□□□ -0.44
VEGFA-216ENST00000512683 DNASE1L3Q13609 305 aa12.32□□□□□ -0.44
VEGFA-216ENST00000512683 TFDP2Q14188 446 aa12.32□□□□□ -0.44
VEGFA-216ENST00000512683 ERV3-1Q14264 604 aa12.32□□□□□ -0.44
VEGFA-216ENST00000512683 GPR18Q14330 331 aa12.32□□□□□ -0.44
VEGFA-216ENST00000512683 ALS2CLQ60I27 953 aa12.32□□□□□ -0.44
VEGFA-216ENST00000512683 CRTC3Q6UUV7 619 aa12.32□□□□□ -0.44
VEGFA-216ENST00000512683 ASB18Q6ZVZ8 466 aa12.32□□□□□ -0.44
VEGFA-216ENST00000512683 B4GALNT4Q76KP1 1039 aa12.32□□□□□ -0.44
VEGFA-216ENST00000512683 RHOT1Q8IXI2 618 aa12.32□□□□□ -0.44
VEGFA-216ENST00000512683 SIDT2Q8NBJ9 832 aaKnown RBP12.32□□□□□ -0.44
VEGFA-216ENST00000512683 LRFN5Q96NI6 719 aa12.32□□□□□ -0.44
VEGFA-216ENST00000512683 PSMG3-AS1Q96PY0 264 aa12.32□□□□□ -0.44
VEGFA-216ENST00000512683 TRIM5Q9C035 493 aa12.32□□□□□ -0.44
VEGFA-216ENST00000512683 TWSG1Q9GZX9 223 aa12.32□□□□□ -0.44
VEGFA-216ENST00000512683 GOLPH3Q9H4A6 298 aa12.32□□□□□ -0.44
VEGFA-216ENST00000512683 SYTL2Q9HCH5 934 aa12.32□□□□□ -0.44
VEGFA-216ENST00000512683 IL26Q9NPH9 171 aa12.32□□□□□ -0.44
VEGFA-216ENST00000512683 SAE1Q9UBE0 346 aaPredicted RBP12.32□□□□□ -0.44
VEGFA-216ENST00000512683 LNPEPQ9UIQ6 1025 aa12.32□□□□□ -0.44
VEGFA-216ENST00000512683 ACSL5Q9ULC5 683 aa12.32□□□□□ -0.44
VEGFA-216ENST00000512683 TFR2Q9UP52 801 aa12.32□□□□□ -0.44
VEGFA-216ENST00000512683 TP53TG5Q9Y2B4 290 aa12.32□□□□□ -0.44
VEGFA-216ENST00000512683 DNAJC16Q9Y2G8 782 aa12.32□□□□□ -0.44
VEGFA-216ENST00000512683 PCDHGA9Q9Y5G4 932 aaKnown RBP12.32□□□□□ -0.44
VEGFA-216ENST00000512683 POP7O75817 140 aaKnown RBP12.31□□□□□ -0.44
VEGFA-216ENST00000512683 TNNT1P13805 278 aa12.31□□□□□ -0.44
VEGFA-216ENST00000512683 PTPN4P29074 926 aa12.31□□□□□ -0.44
VEGFA-216ENST00000512683 MAGEA1P43355 309 aa12.31□□□□□ -0.44
VEGFA-216ENST00000512683 DYNLT1P63172 113 aa12.31□□□□□ -0.44
VEGFA-216ENST00000512683 SH3BP2P78314 561 aa12.31□□□□□ -0.44
VEGFA-216ENST00000512683 HSD11B2P80365 405 aa12.31□□□□□ -0.44
VEGFA-216ENST00000512683 ADCY2Q08462 1091 aa12.31□□□□□ -0.44
VEGFA-216ENST00000512683 ITGA9Q13797 1035 aa12.31□□□□□ -0.44
VEGFA-216ENST00000512683 RPE65Q16518 533 aa12.31□□□□□ -0.44
VEGFA-216ENST00000512683 UGT8Q16880 541 aa12.31□□□□□ -0.44
VEGFA-216ENST00000512683 ATP13A5Q4VNC0 1218 aa12.31□□□□□ -0.44
VEGFA-216ENST00000512683 ZNF648Q5T619 568 aaPredicted RBP12.31□□□□□ -0.44
VEGFA-216ENST00000512683 METRNLQ641Q3 311 aa12.31□□□□□ -0.44
VEGFA-216ENST00000512683 IRGCQ6NXR0 463 aa12.31□□□□□ -0.44
VEGFA-216ENST00000512683 SYVN1Q86TM6 617 aa12.31□□□□□ -0.44
VEGFA-216ENST00000512683 RFX6Q8HWS3 928 aa12.31□□□□□ -0.44
VEGFA-216ENST00000512683 TRAPPC5Q8IUR0 188 aa12.31□□□□□ -0.44
VEGFA-216ENST00000512683 D2HGDHQ8N465 521 aa12.31□□□□□ -0.44
VEGFA-216ENST00000512683 GALNT11Q8NCW6 608 aa12.31□□□□□ -0.44
VEGFA-216ENST00000512683 GDAP1Q8TB36 358 aa12.31□□□□□ -0.44
VEGFA-216ENST00000512683 RSC1A1Q92681 617 aa12.31□□□□□ -0.44
VEGFA-216ENST00000512683 FCRL5Q96RD9 977 aa12.31□□□□□ -0.44
VEGFA-216ENST00000512683 C19orf43Q9BQ61 176 aa12.31□□□□□ -0.44
VEGFA-216ENST00000512683 ARFGAP3Q9NP61 516 aa12.31□□□□□ -0.44
VEGFA-216ENST00000512683 LATS2Q9NRM7 1088 aa12.31□□□□□ -0.44
VEGFA-216ENST00000512683 SMOXQ9NWM0 555 aa12.31□□□□□ -0.44
VEGFA-216ENST00000512683 IL17CQ9P0M4 197 aa12.31□□□□□ -0.44
VEGFA-216ENST00000512683 TLK1Q9UKI8 766 aa12.31□□□□□ -0.44
VEGFA-216ENST00000512683 TMPRSS11EQ9UL52 423 aa12.31□□□□□ -0.44
VEGFA-216ENST00000512683 MAN2B2Q9Y2E5 1009 aa12.31□□□□□ -0.44
VEGFA-216ENST00000512683 ALG6Q9Y672 507 aa12.31□□□□□ -0.44
VEGFA-216ENST00000512683 OR52A4PA6NMU1 304 aa12.3□□□□□ -0.44
VEGFA-216ENST00000512683 SPOPO43791 374 aa12.3□□□□□ -0.44
VEGFA-216ENST00000512683 MT-CYBP00156 380 aaPredicted RBP12.3□□□□□ -0.44
VEGFA-216ENST00000512683 PIRTP0C851 137 aa12.3□□□□□ -0.44
VEGFA-216ENST00000512683 PECAM1P16284 738 aaPredicted RBP12.3□□□□□ -0.44
VEGFA-216ENST00000512683 HLA-DPA1P20036 260 aa12.3□□□□□ -0.44
VEGFA-216ENST00000512683 LPOP22079 712 aaPredicted RBP12.3□□□□□ -0.44
VEGFA-216ENST00000512683 PTPN3P26045 913 aa12.3□□□□□ -0.44
VEGFA-216ENST00000512683 NDUFS1P28331 727 aa12.3□□□□□ -0.44
VEGFA-216ENST00000512683 SPAM1P38567 509 aa12.3□□□□□ -0.44
VEGFA-216ENST00000512683 ARL4DP49703 201 aa12.3□□□□□ -0.44
VEGFA-216ENST00000512683 DRG2P55039 364 aaKnown RBP12.3□□□□□ -0.44
VEGFA-216ENST00000512683 WNT3AP56704 352 aa12.3□□□□□ -0.44
VEGFA-216ENST00000512683 TUBB4BP68371 445 aa12.3□□□□□ -0.44
VEGFA-216ENST00000512683 TUBB3Q13509 450 aa12.3□□□□□ -0.44
VEGFA-216ENST00000512683 TUBB2AQ13885 445 aa12.3□□□□□ -0.44
VEGFA-216ENST00000512683 PRKD1Q15139 912 aaPredicted RBP12.3□□□□□ -0.44
VEGFA-216ENST00000512683 LLGL1Q15334 1064 aa12.3□□□□□ -0.44
VEGFA-216ENST00000512683 SEPT7Q16181 437 aaKnown RBP12.3□□□□□ -0.44
VEGFA-216ENST00000512683 PCSK7Q16549 785 aa12.3□□□□□ -0.44
VEGFA-216ENST00000512683 LONRF2Q1L5Z9 754 aa12.3□□□□□ -0.44
VEGFA-216ENST00000512683 TMTC4Q5T4D3 741 aa12.3□□□□□ -0.44
VEGFA-216ENST00000512683 PAPD7Q5XG87 772 aaKnown RBP12.3□□□□□ -0.44
VEGFA-216ENST00000512683 PWWP2BQ6NUJ5 590 aa12.3□□□□□ -0.44
VEGFA-216ENST00000512683 DDHD1Q8NEL9 900 aa12.3□□□□□ -0.44
VEGFA-216ENST00000512683 SPATA22Q8NHS9 363 aa12.3□□□□□ -0.44
VEGFA-216ENST00000512683 TFB1MQ8WVM0 346 aaKnown RBP12.3□□□□□ -0.44
VEGFA-216ENST00000512683 TUBB2BQ9BVA1 445 aa12.3□□□□□ -0.44
VEGFA-216ENST00000512683 MLXIPLQ9NP71 852 aa12.3□□□□□ -0.44
VEGFA-216ENST00000512683 FGF21Q9NSA1 209 aa12.3□□□□□ -0.44
VEGFA-216ENST00000512683 KCND1Q9NSA2 647 aa12.3□□□□□ -0.44
VEGFA-216ENST00000512683 TRHDEQ9UKU6 1024 aa12.3□□□□□ -0.44
VEGFA-216ENST00000512683 FARSAQ9Y285 508 aaKnown RBP12.3□□□□□ -0.44
VEGFA-216ENST00000512683 PKP3Q9Y446 797 aa12.3□□□□□ -0.44
VEGFA-216ENST00000512683 PCDHA13Q9Y5I0 950 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms