RNA–Protein interactions for RNA: ENST00000508756.2

CHD1-205, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-205ENST00000508756 TFAP2AP05549 437 aa6.64□□□□□ -1.35
CHD1-205ENST00000508756 LIPFP07098 398 aa6.64□□□□□ -1.35
CHD1-205ENST00000508756 HOXD13P35453 343 aa6.64□□□□□ -1.35
CHD1-205ENST00000508756 TIMP3P35625 211 aa6.64□□□□□ -1.35
CHD1-205ENST00000508756 SUOXP51687 545 aa6.64□□□□□ -1.35
CHD1-205ENST00000508756 MRPS5P82675 430 aaKnown RBP6.64□□□□□ -1.35
CHD1-205ENST00000508756 AIMP2Q13155 320 aaKnown RBP6.64□□□□□ -1.35
CHD1-205ENST00000508756 KCNC3Q14003 757 aa6.64□□□□□ -1.35
CHD1-205ENST00000508756 KIR2DS5Q14953 304 aa6.64□□□□□ -1.35
CHD1-205ENST00000508756 HYIQ5T013 277 aa6.64□□□□□ -1.35
CHD1-205ENST00000508756 ITPRIPL1Q6GPH6 555 aa6.64□□□□□ -1.35
CHD1-205ENST00000508756 EPHX4Q8IUS5 362 aa6.64□□□□□ -1.35
CHD1-205ENST00000508756 KLHDC9Q8NEP7 349 aa6.64□□□□□ -1.35
CHD1-205ENST00000508756 ABHD8Q96I13 439 aa6.64□□□□□ -1.35
CHD1-205ENST00000508756 ZNF354BQ96LW1 612 aa6.64□□□□□ -1.35
CHD1-205ENST00000508756 HRH4Q9H3N8 390 aa6.64□□□□□ -1.35
CHD1-205ENST00000508756 MBNL1Q9NR56 388 aaKnown RBP6.64□□□□□ -1.35
CHD1-205ENST00000508756 TBC1D29Q9UFV1 150 aa6.64□□□□□ -1.35
CHD1-205ENST00000508756 YIPF1Q9Y548 306 aa6.64□□□□□ -1.35
CHD1-205ENST00000508756 PCDHGA5Q9Y5G8 931 aa6.64□□□□□ -1.35
CHD1-205ENST00000508756 MITFO75030 526 aaPredicted RBP6.63□□□□□ -1.35
CHD1-205ENST00000508756 TUBBP07437 444 aa6.63□□□□□ -1.35
CHD1-205ENST00000508756 MMP9P14780 707 aa6.63□□□□□ -1.35
CHD1-205ENST00000508756 TCEA1P23193 301 aaKnown RBP6.63□□□□□ -1.35
CHD1-205ENST00000508756 NMBRP28336 390 aa6.63□□□□□ -1.35
CHD1-205ENST00000508756 MAPRE1Q15691 268 aaKnown RBP6.63□□□□□ -1.35
CHD1-205ENST00000508756 RAB41Q5JT25 222 aa6.63□□□□□ -1.35
CHD1-205ENST00000508756 PACS1Q6VY07 963 aa6.63□□□□□ -1.35
CHD1-205ENST00000508756 RDM1Q8NG50 284 aa6.63□□□□□ -1.35
CHD1-205ENST00000508756 NR4A3Q92570 626 aa6.63□□□□□ -1.35
CHD1-205ENST00000508756 SAT2Q96F10 170 aaPredicted RBP6.63□□□□□ -1.35
CHD1-205ENST00000508756 SCRN2Q96FV2 425 aa6.63□□□□□ -1.35
CHD1-205ENST00000508756 FAM118AQ9NWS6 357 aa6.63□□□□□ -1.35
CHD1-205ENST00000508756 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.63□□□□□ -1.35
CHD1-205ENST00000508756 DNAJB4Q9UDY4 337 aa6.63□□□□□ -1.35
CHD1-205ENST00000508756 PNMA2Q9UL42 364 aa6.63□□□□□ -1.35
CHD1-205ENST00000508756 SYNCRIPO60506 623 aaKnown RBP6.62□□□□□ -1.35
CHD1-205ENST00000508756 GJB3O75712 270 aa6.62□□□□□ -1.35
CHD1-205ENST00000508756 RSL1D1O76021 490 aaKnown RBP6.62□□□□□ -1.35
CHD1-205ENST00000508756 GCNT3O95395 438 aa6.62□□□□□ -1.35
CHD1-205ENST00000508756 MMP15P51511 669 aa6.62□□□□□ -1.35
CHD1-205ENST00000508756 EIF5P55010 431 aaKnown RBP6.62□□□□□ -1.35
CHD1-205ENST00000508756 NAP1L1P55209 391 aaKnown RBP6.62□□□□□ -1.35
CHD1-205ENST00000508756 PLA2G4FQ68DD2 849 aa6.62□□□□□ -1.35
CHD1-205ENST00000508756 ANO5Q75V66 913 aa6.62□□□□□ -1.35
CHD1-205ENST00000508756 AACSQ86V21 672 aa6.62□□□□□ -1.35
CHD1-205ENST00000508756 C1orf131Q8NDD1 294 aaKnown RBP6.62□□□□□ -1.35
CHD1-205ENST00000508756 CEP295NLQ96MC4 621 aa6.62□□□□□ -1.35
CHD1-205ENST00000508756 C17orf77Q96MU5 243 aa6.62□□□□□ -1.35
CHD1-205ENST00000508756 DACH2Q96NX9 599 aa6.62□□□□□ -1.35
CHD1-205ENST00000508756 MAK16Q9BXY0 300 aaKnown RBP6.62□□□□□ -1.35
CHD1-205ENST00000508756 VPS28Q9UK41 221 aa6.62□□□□□ -1.35
CHD1-205ENST00000508756 EXO1Q9UQ84 846 aaKnown RBP6.62□□□□□ -1.35
CHD1-205ENST00000508756 A0A1W2PPI3 338 aa6.61□□□□□ -1.35
CHD1-205ENST00000508756 A0A1W2PQ09 198 aa6.61□□□□□ -1.35
CHD1-205ENST00000508756 B4DLN1 442 aa6.61□□□□□ -1.35
CHD1-205ENST00000508756 PRKNO60260 465 aaPredicted RBP6.61□□□□□ -1.35
CHD1-205ENST00000508756 PRSS1P07477 247 aa6.61□□□□□ -1.35
CHD1-205ENST00000508756 FGF5P12034 268 aa6.61□□□□□ -1.35
CHD1-205ENST00000508756 ANOS1P23352 680 aa6.61□□□□□ -1.35
CHD1-205ENST00000508756 DCTP40126 519 aa6.61□□□□□ -1.35
CHD1-205ENST00000508756 SLC15A1P46059 708 aa6.61□□□□□ -1.35
CHD1-205ENST00000508756 MRPL12P52815 198 aaKnown RBP6.61□□□□□ -1.35
CHD1-205ENST00000508756 KIR2DS3Q14952 304 aa6.61□□□□□ -1.35
CHD1-205ENST00000508756 MEA1Q16626 185 aa6.61□□□□□ -1.35
CHD1-205ENST00000508756 CCNYL2Q5T2Q4 361 aa6.61□□□□□ -1.35
CHD1-205ENST00000508756 NDUFAF5Q5TEU4 345 aa6.61□□□□□ -1.35
CHD1-205ENST00000508756 PTOV1Q86YD1 416 aa6.61□□□□□ -1.35
CHD1-205ENST00000508756 C17orf53Q8N3J3 647 aaPredicted RBP6.61□□□□□ -1.35
CHD1-205ENST00000508756 SMPDL3BQ92485 455 aa6.61□□□□□ -1.35
CHD1-205ENST00000508756 SEMA4DQ92854 862 aa6.61□□□□□ -1.35
CHD1-205ENST00000508756 TAS2R14Q9NYV8 317 aa6.61□□□□□ -1.35
CHD1-205ENST00000508756 PTTG2Q9NZH5 202 aa6.61□□□□□ -1.35
CHD1-205ENST00000508756 MDFICQ9P1T7 246 aa6.61□□□□□ -1.35
CHD1-205ENST00000508756 SUCLA2Q9P2R7 463 aaPredicted RBP6.61□□□□□ -1.35
CHD1-205ENST00000508756 ADD3Q9UEY8 706 aaKnown RBP6.61□□□□□ -1.35
CHD1-205ENST00000508756 TEX13DA0A0J9YY54 714 aaPredicted RBP6.6□□□□□ -1.35
CHD1-205ENST00000508756 C15orf62A8K5M9 175 aa6.6□□□□□ -1.35
CHD1-205ENST00000508756 PAX1P15863 534 aa6.6□□□□□ -1.35
CHD1-205ENST00000508756 PRLRP16471 622 aa6.6□□□□□ -1.35
CHD1-205ENST00000508756 GCH1P30793 250 aa6.6□□□□□ -1.35
CHD1-205ENST00000508756 ALS2CLQ60I27 953 aa6.6□□□□□ -1.35
CHD1-205ENST00000508756 DGLUCYQ7Z3D6 616 aa6.6□□□□□ -1.35
CHD1-205ENST00000508756 MCEMP1Q8IX19 187 aa6.6□□□□□ -1.35
CHD1-205ENST00000508756 SPATA3Q8NHX4 192 aa6.6□□□□□ -1.35
CHD1-205ENST00000508756 TBC1D16Q8TBP0 767 aa6.6□□□□□ -1.35
CHD1-205ENST00000508756 LRRC59Q96AG4 307 aaKnown RBP6.6□□□□□ -1.35
CHD1-205ENST00000508756 STAMBPL1Q96FJ0 436 aa6.6□□□□□ -1.35
CHD1-205ENST00000508756 ZNF582Q96NG8 517 aaPredicted RBP6.6□□□□□ -1.35
CHD1-205ENST00000508756 SLC22A12Q96S37 553 aa6.6□□□□□ -1.35
CHD1-205ENST00000508756 SLA2Q9H6Q3 261 aa6.6□□□□□ -1.35
CHD1-205ENST00000508756 SLC38A7Q9NVC3 462 aa6.6□□□□□ -1.35
CHD1-205ENST00000508756 SEC63Q9UGP8 760 aaKnown RBP6.6□□□□□ -1.35
CHD1-205ENST00000508756 JRKLQ9Y4A0 524 aa6.6□□□□□ -1.35
CHD1-205ENST00000508756 LRRC72A6NJI9 287 aa6.59□□□□□ -1.35
CHD1-205ENST00000508756 FAM72CH0Y354 149 aa6.59□□□□□ -1.35
CHD1-205ENST00000508756 CTDSP2O14595 271 aa6.59□□□□□ -1.35
CHD1-205ENST00000508756 NDUFS4O43181 175 aa6.59□□□□□ -1.35
CHD1-205ENST00000508756 PAPSS1O43252 624 aaPredicted RBP6.59□□□□□ -1.35
CHD1-205ENST00000508756 DUOXA1Q1HG43 343 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms