RNA–Protein interactions for RNA: ENST00000508514.5

SKP2-204, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 3 BASIC

Gene SKP2, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-204ENST00000508514 CROTQ9UKG9 612 aa17.56■□□□□ 0.4
SKP2-204ENST00000508514 SPAG6O75602 509 aa17.55■□□□□ 0.4
SKP2-204ENST00000508514 RASSF9O75901 435 aa17.55■□□□□ 0.4
SKP2-204ENST00000508514 KIAA0754O94854 1291 aa17.55■□□□□ 0.4
SKP2-204ENST00000508514 AGTP01019 485 aa17.55■□□□□ 0.4
SKP2-204ENST00000508514 NELFEP18615 380 aaKnown RBP17.55■□□□□ 0.4
SKP2-204ENST00000508514 FECHP22830 423 aa17.55■□□□□ 0.4
SKP2-204ENST00000508514 DLSTP36957 453 aa17.55■□□□□ 0.4
SKP2-204ENST00000508514 SPAM1P38567 509 aa17.55■□□□□ 0.4
SKP2-204ENST00000508514 MSLNQ13421 630 aaPredicted RBP17.55■□□□□ 0.4
SKP2-204ENST00000508514 OLIG2Q13516 323 aa17.55■□□□□ 0.4
SKP2-204ENST00000508514 NFE2L1Q14494 772 aa17.55■□□□□ 0.4
SKP2-204ENST00000508514 ODF2Q5BJF6 829 aa17.55■□□□□ 0.4
SKP2-204ENST00000508514 GPRC6AQ5T6X5 926 aa17.55■□□□□ 0.4
SKP2-204ENST00000508514 C16orf46Q6P387 395 aa17.55■□□□□ 0.4
SKP2-204ENST00000508514 TMEM220Q6QAJ8 160 aa17.55■□□□□ 0.4
SKP2-204ENST00000508514 C6orf15Q6UXA7 325 aaPredicted RBP17.55■□□□□ 0.4
SKP2-204ENST00000508514 CERS6Q6ZMG9 384 aa17.55■□□□□ 0.4
SKP2-204ENST00000508514 TMEM135Q86UB9 458 aa17.55■□□□□ 0.4
SKP2-204ENST00000508514 AMZ2Q86W34 360 aa17.55■□□□□ 0.4
SKP2-204ENST00000508514 RNF214Q8ND24 703 aa17.55■□□□□ 0.4
SKP2-204ENST00000508514 GDAP1Q8TB36 358 aa17.55■□□□□ 0.4
SKP2-204ENST00000508514 BRSK1Q8TDC3 778 aa17.55■□□□□ 0.4
SKP2-204ENST00000508514 BLOC1S5Q8TDH9 187 aa17.55■□□□□ 0.4
SKP2-204ENST00000508514 APOBEC4Q8WW27 367 aaKnown RBP17.55■□□□□ 0.4
SKP2-204ENST00000508514 P3H4Q92791 437 aa17.55■□□□□ 0.4
SKP2-204ENST00000508514 COL26A1Q96A83 441 aa17.55■□□□□ 0.4
SKP2-204ENST00000508514 CXorf40BQ96DE9 158 aa17.55■□□□□ 0.4
SKP2-204ENST00000508514 QKIQ96PU8 341 aaKnown RBP eCLIP17.55■□□□□ 0.41e-8■■■□□ 18.8
SKP2-204ENST00000508514 AKIRIN1Q9H9L7 192 aaPredicted RBP17.55■□□□□ 0.4
SKP2-204ENST00000508514 PSMD13Q9UNM6 376 aa17.55■□□□□ 0.4
SKP2-204ENST00000508514 ZNF106Q9H2Y7 1883 aaKnown RBP17.54■□□□□ 0.4
SKP2-204ENST00000508514 GLYATL1P3A0A0U1RQE8 302 aa17.54■□□□□ 0.4
SKP2-204ENST00000508514 OR2AG2A6NM03 316 aa17.54■□□□□ 0.4
SKP2-204ENST00000508514 AKR1B15C9JRZ8 316 aaPredicted RBP17.54■□□□□ 0.4
SKP2-204ENST00000508514 MTSS1O43312 755 aa17.54■□□□□ 0.4
SKP2-204ENST00000508514 SGTAO43765 313 aa17.54■□□□□ 0.4
SKP2-204ENST00000508514 ZRANB2O95218 330 aaKnown RBP eCLIP17.54■□□□□ 0.4
SKP2-204ENST00000508514 NDUFA10O95299 355 aa17.54■□□□□ 0.4
SKP2-204ENST00000508514 LCA5LO95447 670 aa17.54■□□□□ 0.4
SKP2-204ENST00000508514 FOLR1P15328 257 aa17.54■□□□□ 0.4
SKP2-204ENST00000508514 TCN2P20062 427 aa17.54■□□□□ 0.4
SKP2-204ENST00000508514 MAGEA1P43355 309 aa17.54■□□□□ 0.4
SKP2-204ENST00000508514 KCNAB1Q14722 419 aa17.54■□□□□ 0.4
SKP2-204ENST00000508514 COLEC12Q5KU26 742 aa17.54■□□□□ 0.4
SKP2-204ENST00000508514 IRGCQ6NXR0 463 aa17.54■□□□□ 0.4
SKP2-204ENST00000508514 GLT6D1Q7Z4J2 308 aa17.54■□□□□ 0.4
SKP2-204ENST00000508514 RBM12BQ8IXT5 1001 aaKnown RBP17.54■□□□□ 0.4
SKP2-204ENST00000508514 RCOR2Q8IZ40 523 aa17.54■□□□□ 0.4
SKP2-204ENST00000508514 BEND7Q8N7W2 519 aaPredicted RBP17.54■□□□□ 0.4
SKP2-204ENST00000508514 TC2NQ8N9U0 490 aa17.54■□□□□ 0.4
SKP2-204ENST00000508514 ZDHHC12Q96GR4 267 aa17.54■□□□□ 0.4
SKP2-204ENST00000508514 SLC41A2Q96JW4 573 aa17.54■□□□□ 0.4
SKP2-204ENST00000508514 HEMGNQ9BXL5 484 aa17.54■□□□□ 0.4
SKP2-204ENST00000508514 HACD3Q9P035 362 aa17.54■□□□□ 0.4
SKP2-204ENST00000508514 KCTD3Q9Y597 815 aa17.54■□□□□ 0.4
SKP2-204ENST00000508514 ARL5AQ9Y689 179 aa17.54■□□□□ 0.4
SKP2-204ENST00000508514 KCNMB2Q9Y691 235 aa17.54■□□□□ 0.4
SKP2-204ENST00000508514 KCNJ13O60928 360 aa17.53■□□□□ 0.4
SKP2-204ENST00000508514 TPM1P09493 284 aa17.53■□□□□ 0.4
SKP2-204ENST00000508514 HLA-DPA1P20036 260 aa17.53■□□□□ 0.4
SKP2-204ENST00000508514 RBL1P28749 1068 aa17.53■□□□□ 0.4
SKP2-204ENST00000508514 ADRA1AP35348 466 aa17.53■□□□□ 0.4
SKP2-204ENST00000508514 MPP3Q13368 585 aa17.53■□□□□ 0.4
SKP2-204ENST00000508514 GTF2H3Q13889 308 aa17.53■□□□□ 0.4
SKP2-204ENST00000508514 IGFBP7Q16270 282 aa17.53■□□□□ 0.4
SKP2-204ENST00000508514 PPP2R5EQ16537 467 aa17.53■□□□□ 0.4
SKP2-204ENST00000508514 LDLRAP1Q5SW96 308 aa17.53■□□□□ 0.4
SKP2-204ENST00000508514 ZDHHC20Q5W0Z9 365 aa17.53■□□□□ 0.4
SKP2-204ENST00000508514 METRNLQ641Q3 311 aa17.53■□□□□ 0.4
SKP2-204ENST00000508514 PWWP2BQ6NUJ5 590 aa17.53■□□□□ 0.4
SKP2-204ENST00000508514 MICALCLQ6ZW33 695 aa17.53■□□□□ 0.4
SKP2-204ENST00000508514 BBS12Q6ZW61 710 aa17.53■□□□□ 0.4
SKP2-204ENST00000508514 RASGRP3Q8IV61 690 aa17.53■□□□□ 0.4
SKP2-204ENST00000508514 CNGA4Q8IV77 575 aa17.53■□□□□ 0.4
SKP2-204ENST00000508514 C9orf43Q8TAL5 461 aaPredicted RBP17.53■□□□□ 0.4
SKP2-204ENST00000508514 TTC25Q96NG3 672 aa17.53■□□□□ 0.4
SKP2-204ENST00000508514 RUFY1Q96T51 708 aa17.53■□□□□ 0.4
SKP2-204ENST00000508514 INSM2Q96T92 566 aaPredicted RBP17.53■□□□□ 0.4
SKP2-204ENST00000508514 VAT1Q99536 393 aa17.53■□□□□ 0.4
SKP2-204ENST00000508514 SMOXQ9NWM0 555 aa17.53■□□□□ 0.4
SKP2-204ENST00000508514 CFAP20Q9Y6A4 193 aaKnown RBP17.53■□□□□ 0.4
SKP2-204ENST00000508514 DNMT3AQ9Y6K1 912 aaPredicted RBP17.53■□□□□ 0.4
SKP2-204ENST00000508514 FLNCQ14315 2725 aa17.52■□□□□ 0.4
SKP2-204ENST00000508514 VCLP18206 1134 aa17.52■□□□□ 0.4
SKP2-204ENST00000508514 NR1D1P20393 614 aa17.52■□□□□ 0.4
SKP2-204ENST00000508514 CASRP41180 1078 aa17.52■□□□□ 0.4
SKP2-204ENST00000508514 MC1RQ01726 317 aa17.52■□□□□ 0.4
SKP2-204ENST00000508514 ERV3-1Q14264 604 aa17.52■□□□□ 0.4
SKP2-204ENST00000508514 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.52■□□□□ 0.4
SKP2-204ENST00000508514 DUS1LQ6P1R4 473 aaKnown RBP17.52■□□□□ 0.4
SKP2-204ENST00000508514 RANBP10Q6VN20 620 aa17.52■□□□□ 0.4
SKP2-204ENST00000508514 DET1Q7L5Y6 550 aa17.52■□□□□ 0.4
SKP2-204ENST00000508514 SPDYE1Q8NFV5 336 aaPredicted RBP17.52■□□□□ 0.4
SKP2-204ENST00000508514 ZNF398Q8TD17 642 aa17.52■□□□□ 0.4
SKP2-204ENST00000508514 MAP3K3Q99759 626 aa17.52■□□□□ 0.4
SKP2-204ENST00000508514 TSPY26PQ9H489 355 aa17.52■□□□□ 0.4
SKP2-204ENST00000508514 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.52■□□□□ 0.4
SKP2-204ENST00000508514 RSPH14Q9UHP6 348 aa17.52■□□□□ 0.4
SKP2-204ENST00000508514 TRHDEQ9UKU6 1024 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms