RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 TAAR2Q9P1P5 351 aa4.08□□□□□ -1.76
TRAPPC13-209ENST00000508304 SEC63Q9UGP8 760 aaKnown RBP4.08□□□□□ -1.76
TRAPPC13-209ENST00000508304 ANAPC5Q9UJX4 755 aa4.08□□□□□ -1.76
TRAPPC13-209ENST00000508304 A0A1W2PQM1 296 aa4.07□□□□□ -1.76
TRAPPC13-209ENST00000508304 A0A1W2PRG0 241 aa4.07□□□□□ -1.76
TRAPPC13-209ENST00000508304 TAF4O00268 1085 aa4.07□□□□□ -1.76
TRAPPC13-209ENST00000508304 PSMA7O14818 248 aa4.07□□□□□ -1.76
TRAPPC13-209ENST00000508304 LDLRAD4O15165 306 aa4.07□□□□□ -1.76
TRAPPC13-209ENST00000508304 SEC14L5O43304 696 aa4.07□□□□□ -1.76
TRAPPC13-209ENST00000508304 PAGE4O60829 102 aa4.07□□□□□ -1.76
TRAPPC13-209ENST00000508304 GPC4O75487 556 aa4.07□□□□□ -1.76
TRAPPC13-209ENST00000508304 ABCB1P08183 1280 aaPredicted RBP4.07□□□□□ -1.76
TRAPPC13-209ENST00000508304 SP100P23497 879 aaPredicted RBP4.07□□□□□ -1.76
TRAPPC13-209ENST00000508304 EIF2S3P41091 472 aaKnown RBP4.07□□□□□ -1.76
TRAPPC13-209ENST00000508304 PSMC6P62333 389 aa4.07□□□□□ -1.76
TRAPPC13-209ENST00000508304 SLC20A2Q08357 652 aa4.07□□□□□ -1.76
TRAPPC13-209ENST00000508304 IKQ13123 557 aaPredicted RBP4.07□□□□□ -1.76
TRAPPC13-209ENST00000508304 IRF3Q14653 427 aa4.07□□□□□ -1.76
TRAPPC13-209ENST00000508304 LPAL2Q16609 132 aa4.07□□□□□ -1.76
TRAPPC13-209ENST00000508304 SGO1Q5FBB7 561 aa4.07□□□□□ -1.76
TRAPPC13-209ENST00000508304 C9orf152Q5JTZ5 239 aa4.07□□□□□ -1.76
TRAPPC13-209ENST00000508304 LCE3EQ5T5B0 92 aa4.07□□□□□ -1.76
TRAPPC13-209ENST00000508304 ZC2HC1BQ5TFG8 222 aa4.07□□□□□ -1.76
TRAPPC13-209ENST00000508304 TXNDC8Q6A555 127 aa4.07□□□□□ -1.76
TRAPPC13-209ENST00000508304 SLFN11Q7Z7L1 901 aa4.07□□□□□ -1.76
TRAPPC13-209ENST00000508304 KMT5CQ86Y97 462 aa4.07□□□□□ -1.76
TRAPPC13-209ENST00000508304 CREBRFQ8IUR6 639 aa4.07□□□□□ -1.76
TRAPPC13-209ENST00000508304 SLC35F3Q8IY50 421 aa4.07□□□□□ -1.76
TRAPPC13-209ENST00000508304 RNF113BQ8IZP6 322 aaKnown RBP4.07□□□□□ -1.76
TRAPPC13-209ENST00000508304 HUS1BQ8NHY5 278 aa4.07□□□□□ -1.76
TRAPPC13-209ENST00000508304 AFAP1L1Q8TED9 768 aa4.07□□□□□ -1.76
TRAPPC13-209ENST00000508304 PSPC1Q8WXF1 523 aaKnown RBP4.07□□□□□ -1.76
TRAPPC13-209ENST00000508304 VPS33AQ96AX1 596 aa4.07□□□□□ -1.76
TRAPPC13-209ENST00000508304 RMDN1Q96DB5 314 aa4.07□□□□□ -1.76
TRAPPC13-209ENST00000508304 LGALS12Q96DT0 336 aa4.07□□□□□ -1.76
TRAPPC13-209ENST00000508304 MMABQ96EY8 250 aaPredicted RBP4.07□□□□□ -1.76
TRAPPC13-209ENST00000508304 STRA6Q9BX79 667 aa4.07□□□□□ -1.76
TRAPPC13-209ENST00000508304 OSGEPL1Q9H4B0 414 aa4.07□□□□□ -1.76
TRAPPC13-209ENST00000508304 FKRPQ9H9S5 495 aa4.07□□□□□ -1.76
TRAPPC13-209ENST00000508304 SCPEP1Q9HB40 452 aa4.07□□□□□ -1.76
TRAPPC13-209ENST00000508304 HINT3Q9NQE9 182 aaKnown RBP4.07□□□□□ -1.76
TRAPPC13-209ENST00000508304 DDX4Q9NQI0 724 aaKnown RBP4.07□□□□□ -1.76
TRAPPC13-209ENST00000508304 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.07□□□□□ -1.76
TRAPPC13-209ENST00000508304 SLC6A13Q9NSD5 602 aa4.07□□□□□ -1.76
TRAPPC13-209ENST00000508304 ARHGEF38Q9NXL2 777 aa4.07□□□□□ -1.76
TRAPPC13-209ENST00000508304 PTRH2Q9Y3E5 179 aaKnown RBP4.07□□□□□ -1.76
TRAPPC13-209ENST00000508304 ASPDHA6ND91 283 aa4.06□□□□□ -1.76
TRAPPC13-209ENST00000508304 UBE2CO00762 179 aa4.06□□□□□ -1.76
TRAPPC13-209ENST00000508304 ADAM20O43506 726 aa4.06□□□□□ -1.76
TRAPPC13-209ENST00000508304 PRSS1P07477 247 aa4.06□□□□□ -1.76
TRAPPC13-209ENST00000508304 CYC1P08574 325 aa4.06□□□□□ -1.76
TRAPPC13-209ENST00000508304 HOXB5P09067 269 aa4.06□□□□□ -1.76
TRAPPC13-209ENST00000508304 QDPRP09417 244 aa4.06□□□□□ -1.76
TRAPPC13-209ENST00000508304 MYBL1P10243 752 aa4.06□□□□□ -1.76
TRAPPC13-209ENST00000508304 CDH1P12830 882 aa4.06□□□□□ -1.76
TRAPPC13-209ENST00000508304 MAOAP21397 527 aa4.06□□□□□ -1.76
TRAPPC13-209ENST00000508304 BDKRB2P30411 391 aa4.06□□□□□ -1.76
TRAPPC13-209ENST00000508304 SHMT1P34896 483 aa4.06□□□□□ -1.76
TRAPPC13-209ENST00000508304 PIP4K2AP48426 406 aaPredicted RBP4.06□□□□□ -1.76
TRAPPC13-209ENST00000508304 F2RL1P55085 397 aa4.06□□□□□ -1.76
TRAPPC13-209ENST00000508304 HNRNPH2P55795 449 aaKnown RBP4.06□□□□□ -1.76
TRAPPC13-209ENST00000508304 EEF1A1P68104 462 aaKnown RBP4.06□□□□□ -1.76
TRAPPC13-209ENST00000508304 PDE1BQ01064 536 aa4.06□□□□□ -1.76
TRAPPC13-209ENST00000508304 RELQ04864 619 aaPredicted RBP4.06□□□□□ -1.76
TRAPPC13-209ENST00000508304 OLIG2Q13516 323 aa4.06□□□□□ -1.76
TRAPPC13-209ENST00000508304 NAE1Q13564 534 aa4.06□□□□□ -1.76
TRAPPC13-209ENST00000508304 DRAP1Q14919 205 aaPredicted RBP4.06□□□□□ -1.76
TRAPPC13-209ENST00000508304 KYNUQ16719 465 aa4.06□□□□□ -1.76
TRAPPC13-209ENST00000508304 IGSF11Q5DX21 431 aa4.06□□□□□ -1.76
TRAPPC13-209ENST00000508304 EEF1A1P5Q5VTE0 462 aa4.06□□□□□ -1.76
TRAPPC13-209ENST00000508304 FBXO46Q6PJ61 603 aaPredicted RBP4.06□□□□□ -1.76
TRAPPC13-209ENST00000508304 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.06□□□□□ -1.76
TRAPPC13-209ENST00000508304 OR8H3Q8N146 312 aa4.06□□□□□ -1.76
TRAPPC13-209ENST00000508304 LYG1Q8N1E2 194 aa4.06□□□□□ -1.76
TRAPPC13-209ENST00000508304 SPATA6LQ8N4H0 392 aa4.06□□□□□ -1.76
TRAPPC13-209ENST00000508304 CHCHD4Q8N4Q1 142 aa4.06□□□□□ -1.76
TRAPPC13-209ENST00000508304 TMCO5AQ8N6Q1 288 aa4.06□□□□□ -1.76
TRAPPC13-209ENST00000508304 MSANTD4Q8NCY6 345 aa4.06□□□□□ -1.76
TRAPPC13-209ENST00000508304 OR6J1Q8NGC5 347 aa4.06□□□□□ -1.76
TRAPPC13-209ENST00000508304 SGCDQ92629 289 aa4.06□□□□□ -1.76
TRAPPC13-209ENST00000508304 SLC22A18Q96BI1 424 aa4.06□□□□□ -1.76
TRAPPC13-209ENST00000508304 SIPA1Q96FS4 1042 aa4.06□□□□□ -1.76
TRAPPC13-209ENST00000508304 TMEM68Q96MH6 324 aa4.06□□□□□ -1.76
TRAPPC13-209ENST00000508304 ABHD1Q96SE0 405 aa4.06□□□□□ -1.76
TRAPPC13-209ENST00000508304 ESRP2Q9H6T0 727 aaKnown RBP4.06□□□□□ -1.76
TRAPPC13-209ENST00000508304 RANGRFQ9HD47 186 aaPredicted RBP4.06□□□□□ -1.76
TRAPPC13-209ENST00000508304 ASAH2Q9NR71 780 aa4.06□□□□□ -1.76
TRAPPC13-209ENST00000508304 FBXL17Q9UF56 701 aa4.06□□□□□ -1.76
TRAPPC13-209ENST00000508304 TINAGQ9UJW2 476 aa4.06□□□□□ -1.76
TRAPPC13-209ENST00000508304 PADI1Q9ULC6 663 aa4.06□□□□□ -1.76
TRAPPC13-209ENST00000508304 R3HDM2Q9Y2K5 976 aaKnown RBP4.06□□□□□ -1.76
TRAPPC13-209ENST00000508304 LOXL2Q9Y4K0 774 aa4.06□□□□□ -1.76
TRAPPC13-209ENST00000508304 TRPV2Q9Y5S1 764 aa4.06□□□□□ -1.76
TRAPPC13-209ENST00000508304 PDS5AQ29RF7 1337 aaKnown RBP4.05□□□□□ -1.76
TRAPPC13-209ENST00000508304 LOC100509620A0A075B734 347 aa4.05□□□□□ -1.76
TRAPPC13-209ENST00000508304 LRRC72A6NJI9 287 aa4.05□□□□□ -1.76
TRAPPC13-209ENST00000508304 A6NL46 340 aa4.05□□□□□ -1.76
TRAPPC13-209ENST00000508304 PMS2P5A8MQ11 134 aa4.05□□□□□ -1.76
TRAPPC13-209ENST00000508304 DVL1O14640 695 aa4.05□□□□□ -1.76
TRAPPC13-209ENST00000508304 CAPN9O14815 690 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms