RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 AMER2Q8N7J2 671 aa15.72■□□□□ 0.11
SCLT1-208ENST00000506368 SGCDQ92629 289 aa15.72■□□□□ 0.11
SCLT1-208ENST00000506368 HTRA1Q92743 480 aa15.72■□□□□ 0.11
SCLT1-208ENST00000506368 TBC1D20Q96BZ9 403 aa15.72■□□□□ 0.11
SCLT1-208ENST00000506368 TMEM209Q96SK2 561 aa15.72■□□□□ 0.11
SCLT1-208ENST00000506368 NXF2Q9GZY0 626 aaKnown RBP15.72■□□□□ 0.11
SCLT1-208ENST00000506368 SLA2Q9H6Q3 261 aa15.72■□□□□ 0.11
SCLT1-208ENST00000506368 ALG9Q9H6U8 611 aa15.72■□□□□ 0.11
SCLT1-208ENST00000506368 PCDH12Q9NPG4 1184 aa15.72■□□□□ 0.11
SCLT1-208ENST00000506368 PIGVQ9NUD9 493 aa15.72■□□□□ 0.11
SCLT1-208ENST00000506368 TBC1D14Q9P2M4 693 aa15.72■□□□□ 0.11
SCLT1-208ENST00000506368 NME7Q9Y5B8 376 aa15.72■□□□□ 0.11
SCLT1-208ENST00000506368 PABPN1LA6NDY0 278 aaKnown RBP15.71■□□□□ 0.11
SCLT1-208ENST00000506368 METTL15A6NJ78 407 aa15.71■□□□□ 0.11
SCLT1-208ENST00000506368 FAM25AB3EWG3 89 aa15.71■□□□□ 0.11
SCLT1-208ENST00000506368 FAM25CB3EWG5 89 aa15.71■□□□□ 0.11
SCLT1-208ENST00000506368 FAM25GB3EWG6 89 aa15.71■□□□□ 0.11
SCLT1-208ENST00000506368 PTGES3LE9PB15 166 aa15.71■□□□□ 0.11
SCLT1-208ENST00000506368 GNGT2O14610 69 aa15.71■□□□□ 0.11
SCLT1-208ENST00000506368 SLC7A4O43246 635 aa15.71■□□□□ 0.11
SCLT1-208ENST00000506368 HOXC11O43248 304 aaPredicted RBP15.71■□□□□ 0.11
SCLT1-208ENST00000506368 BDNFP23560 247 aa15.71■□□□□ 0.11
SCLT1-208ENST00000506368 OR4D2P58180 307 aa15.71■□□□□ 0.11
SCLT1-208ENST00000506368 ERVK-8P63133 956 aa15.71■□□□□ 0.11
SCLT1-208ENST00000506368 ADIGQ0VDE8 80 aa15.71■□□□□ 0.11
SCLT1-208ENST00000506368 SLC13A2Q13183 592 aa15.71■□□□□ 0.11
SCLT1-208ENST00000506368 DCAF4L1Q3SXM0 396 aa15.71■□□□□ 0.11
SCLT1-208ENST00000506368 RBM23Q86U06 439 aaKnown RBP15.71■□□□□ 0.11
SCLT1-208ENST00000506368 C11orf74Q86VG3 221 aa15.71■□□□□ 0.11
SCLT1-208ENST00000506368 CCDC103Q8IW40 242 aa15.71■□□□□ 0.11
SCLT1-208ENST00000506368 CLIP4Q8N3C7 705 aa15.71■□□□□ 0.11
SCLT1-208ENST00000506368 TFB2MQ9H5Q4 396 aaKnown RBP15.71■□□□□ 0.11
SCLT1-208ENST00000506368 GLOD4Q9HC38 313 aa15.71■□□□□ 0.11
SCLT1-208ENST00000506368 POLE4Q9NR33 117 aa15.71■□□□□ 0.11
SCLT1-208ENST00000506368 DSEQ9UL01 958 aa15.71■□□□□ 0.11
SCLT1-208ENST00000506368 PCDHGA10Q9Y5H3 936 aa15.71■□□□□ 0.11
SCLT1-208ENST00000506368 CITO14578 2027 aa15.71■□□□□ 0.11
SCLT1-208ENST00000506368 BCKDKO14874 412 aa15.71■□□□□ 0.1
SCLT1-208ENST00000506368 MED26O95402 600 aa15.71■□□□□ 0.1
SCLT1-208ENST00000506368 MSH3P20585 1137 aa15.71■□□□□ 0.1
SCLT1-208ENST00000506368 AGXTP21549 392 aa15.71■□□□□ 0.1
SCLT1-208ENST00000506368 CES1P23141 567 aa15.71■□□□□ 0.1
SCLT1-208ENST00000506368 S100A5P33763 92 aa15.71■□□□□ 0.1
SCLT1-208ENST00000506368 PIGAP37287 484 aa15.71■□□□□ 0.1
SCLT1-208ENST00000506368 ZFP36L2P47974 494 aaKnown RBP15.71■□□□□ 0.1
SCLT1-208ENST00000506368 PRIM2P49643 509 aa15.71■□□□□ 0.1
SCLT1-208ENST00000506368 NPTX1Q15818 432 aa15.71■□□□□ 0.1
SCLT1-208ENST00000506368 RPS27LQ71UM5 84 aaKnown RBP15.71■□□□□ 0.1
SCLT1-208ENST00000506368 ARMCX2Q7L311 632 aa15.71■□□□□ 0.1
SCLT1-208ENST00000506368 ZFAND4Q86XD8 727 aa15.71■□□□□ 0.1
SCLT1-208ENST00000506368 DTWD1Q8N5C7 304 aa15.71■□□□□ 0.1
SCLT1-208ENST00000506368 PTGR2Q8N8N7 351 aaPredicted RBP15.71■□□□□ 0.1
SCLT1-208ENST00000506368 ERLEC1Q96DZ1 483 aa15.71■□□□□ 0.1
SCLT1-208ENST00000506368 GPR20Q99678 358 aa15.71■□□□□ 0.1
SCLT1-208ENST00000506368 FICDQ9BVA6 458 aa15.71■□□□□ 0.1
SCLT1-208ENST00000506368 DUSP16Q9BY84 665 aa15.71■□□□□ 0.1
SCLT1-208ENST00000506368 ARNT2Q9HBZ2 717 aa15.71■□□□□ 0.1
SCLT1-208ENST00000506368 DIABLOQ9NR28 239 aa15.71■□□□□ 0.1
SCLT1-208ENST00000506368 UBP1Q9NZI7 540 aa15.71■□□□□ 0.1
SCLT1-208ENST00000506368 RBPJLQ9UBG7 517 aa15.71■□□□□ 0.1
SCLT1-208ENST00000506368 TIMM22Q9Y584 194 aa15.71■□□□□ 0.1
SCLT1-208ENST00000506368 EIF3FO00303 357 aaPredicted RBP15.7■□□□□ 0.1
SCLT1-208ENST00000506368 RGS10O43665 173 aa15.7■□□□□ 0.1
SCLT1-208ENST00000506368 CRCPO75575 148 aa15.7■□□□□ 0.1
SCLT1-208ENST00000506368 CNMDO75829 334 aa15.7■□□□□ 0.1
SCLT1-208ENST00000506368 SCELO95171 688 aa15.7■□□□□ 0.1
SCLT1-208ENST00000506368 MT-ND1P03886 318 aa15.7■□□□□ 0.1
SCLT1-208ENST00000506368 IQCF3P0C7M6 154 aa15.7■□□□□ 0.1
SCLT1-208ENST00000506368 CYP2C18P33260 490 aa15.7■□□□□ 0.1
SCLT1-208ENST00000506368 HTR7P34969 479 aa15.7■□□□□ 0.1
SCLT1-208ENST00000506368 ETV6P41212 452 aa15.7■□□□□ 0.1
SCLT1-208ENST00000506368 C19orf57Q0VDD7 668 aa15.7■□□□□ 0.1
SCLT1-208ENST00000506368 CDK10Q15131 360 aa15.7■□□□□ 0.1
SCLT1-208ENST00000506368 XKR7Q5GH72 579 aa15.7■□□□□ 0.1
SCLT1-208ENST00000506368 FAM209AQ5JX71 171 aa15.7■□□□□ 0.1
SCLT1-208ENST00000506368 CATSPEREQ5SY80 951 aa15.7■□□□□ 0.1
SCLT1-208ENST00000506368 TMEM236Q5W0B7 351 aa15.7■□□□□ 0.1
SCLT1-208ENST00000506368 DESI1Q6ICB0 168 aa15.7■□□□□ 0.1
SCLT1-208ENST00000506368 IPMKQ8NFU5 416 aa15.7■□□□□ 0.1
SCLT1-208ENST00000506368 PARK7Q99497 189 aaKnown RBP15.7■□□□□ 0.1
SCLT1-208ENST00000506368 FSD1LQ9BXM9 530 aa15.7■□□□□ 0.1
SCLT1-208ENST00000506368 RNF38Q9H0F5 515 aa15.7■□□□□ 0.1
SCLT1-208ENST00000506368 TUBB1Q9H4B7 451 aa15.7■□□□□ 0.1
SCLT1-208ENST00000506368 WDR6Q9NNW5 1121 aaKnown RBP15.7■□□□□ 0.1
SCLT1-208ENST00000506368 CNGB3Q9NQW8 809 aa15.7■□□□□ 0.1
SCLT1-208ENST00000506368 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.7■□□□□ 0.1
SCLT1-208ENST00000506368 HOXC10Q9NYD6 342 aa15.7■□□□□ 0.1
SCLT1-208ENST00000506368 CCDC59Q9P031 241 aaKnown RBP15.7■□□□□ 0.1
SCLT1-208ENST00000506368 RAPGEFL1Q9UHV5 662 aa15.7■□□□□ 0.1
SCLT1-208ENST00000506368 WBP11Q9Y2W2 641 aaKnown RBP15.7■□□□□ 0.1
SCLT1-208ENST00000506368 ZNF638Q14966 1978 aaKnown RBP15.7■□□□□ 0.1
SCLT1-208ENST00000506368 BRCA2P51587 3418 aa15.69■□□□□ 0.1
SCLT1-208ENST00000506368 EFCAB9A8MZ26 197 aa15.69■□□□□ 0.1
SCLT1-208ENST00000506368 FAM72CH0Y354 149 aa15.69■□□□□ 0.1
SCLT1-208ENST00000506368 H3BMM5 538 aa15.69■□□□□ 0.1
SCLT1-208ENST00000506368 SNX2O60749 519 aa15.69■□□□□ 0.1
SCLT1-208ENST00000506368 CD1DP15813 335 aa15.69■□□□□ 0.1
SCLT1-208ENST00000506368 ARF4P18085 180 aaPredicted RBP15.69■□□□□ 0.1
SCLT1-208ENST00000506368 DDOSTP39656 456 aa15.69■□□□□ 0.1
SCLT1-208ENST00000506368 PNPLA4P41247 253 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms