RNA–Protein interactions for RNA: ENST00000504974.1

RFC1-209, Transcript of replication factor C subunit 1, humanhuman

TSL 5

Gene RFC1, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-209ENST00000504974 PRAG1Q86YV5 1406 aa3.17□□□□□ -1.9
RFC1-209ENST00000504974 RPGRIP1LQ68CZ1 1315 aa3.17□□□□□ -1.9
RFC1-209ENST00000504974 ANKRD30BQ9BXX2 1392 aa3.16□□□□□ -1.9
RFC1-209ENST00000504974 UTRNP46939 3433 aa3.16□□□□□ -1.9
RFC1-209ENST00000504974 IGKV2D-30A0A075B6S6 120 aa3.16□□□□□ -1.9
RFC1-209ENST00000504974 A0A0G2JPF8 293 aa3.16□□□□□ -1.9
RFC1-209ENST00000504974 PLSCR5A0PG75 271 aa3.16□□□□□ -1.9
RFC1-209ENST00000504974 CDRT15L2A8MXV6 281 aa3.16□□□□□ -1.9
RFC1-209ENST00000504974 HNRNPCL3B7ZW38 293 aa3.16□□□□□ -1.9
RFC1-209ENST00000504974 MAP2K7O14733 419 aa3.16□□□□□ -1.9
RFC1-209ENST00000504974 IKBKBO14920 756 aa3.16□□□□□ -1.9
RFC1-209ENST00000504974 ANKRD28O15084 1053 aa3.16□□□□□ -1.9
RFC1-209ENST00000504974 MID1O15344 667 aa3.16□□□□□ -1.9
RFC1-209ENST00000504974 ZBTB43O43298 467 aa3.16□□□□□ -1.9
RFC1-209ENST00000504974 DAB1O75553 588 aa3.16□□□□□ -1.9
RFC1-209ENST00000504974 RFPL2O75678 378 aa3.16□□□□□ -1.9
RFC1-209ENST00000504974 PMS2P2O95744 297 aa3.16□□□□□ -1.9
RFC1-209ENST00000504974 HNRNPCL4P0DMR1 293 aa3.16□□□□□ -1.9
RFC1-209ENST00000504974 MMP9P14780 707 aa3.16□□□□□ -1.9
RFC1-209ENST00000504974 ACADLP28330 430 aa3.16□□□□□ -1.9
RFC1-209ENST00000504974 PRELPP51888 382 aa3.16□□□□□ -1.9
RFC1-209ENST00000504974 FOXG1P55316 489 aaPredicted RBP3.16□□□□□ -1.9
RFC1-209ENST00000504974 RRP1P56182 461 aaKnown RBP3.16□□□□□ -1.9
RFC1-209ENST00000504974 CD81P60033 236 aa3.16□□□□□ -1.9
RFC1-209ENST00000504974 ISL1P61371 349 aa3.16□□□□□ -1.9
RFC1-209ENST00000504974 TMF1P82094 1093 aa3.16□□□□□ -1.9
RFC1-209ENST00000504974 COG7P83436 770 aa3.16□□□□□ -1.9
RFC1-209ENST00000504974 ZXDBP98169 803 aa3.16□□□□□ -1.9
RFC1-209ENST00000504974 ECT2LQ008S8 904 aa3.16□□□□□ -1.9
RFC1-209ENST00000504974 ZNF155Q12901 538 aaPredicted RBP3.16□□□□□ -1.9
RFC1-209ENST00000504974 DLG1Q12959 904 aa3.16□□□□□ -1.9
RFC1-209ENST00000504974 SNTA1Q13424 505 aa3.16□□□□□ -1.9
RFC1-209ENST00000504974 KRT33BQ14525 404 aa3.16□□□□□ -1.9
RFC1-209ENST00000504974 SOWAHCQ53LP3 525 aaPredicted RBP3.16□□□□□ -1.9
RFC1-209ENST00000504974 IGSF11Q5DX21 431 aa3.16□□□□□ -1.9
RFC1-209ENST00000504974 IRAK1BP1Q5VVH5 260 aa3.16□□□□□ -1.9
RFC1-209ENST00000504974 C18orf63Q68DL7 685 aa3.16□□□□□ -1.9
RFC1-209ENST00000504974 NADSYN1Q6IA69 706 aa3.16□□□□□ -1.9
RFC1-209ENST00000504974 DLK2Q6UY11 383 aa3.16□□□□□ -1.9
RFC1-209ENST00000504974 AACSQ86V21 672 aa3.16□□□□□ -1.9
RFC1-209ENST00000504974 LINC00346Q8IVM7 164 aa3.16□□□□□ -1.9
RFC1-209ENST00000504974 MAP7D3Q8IWC1 876 aa3.16□□□□□ -1.9
RFC1-209ENST00000504974 CHERPQ8IWX8 916 aaKnown RBP3.16□□□□□ -1.9
RFC1-209ENST00000504974 HACE1Q8IYU2 909 aa3.16□□□□□ -1.9
RFC1-209ENST00000504974 ZNF114Q8NC26 417 aa3.16□□□□□ -1.9
RFC1-209ENST00000504974 LILRB1Q8NHL6 650 aaPredicted RBP3.16□□□□□ -1.9
RFC1-209ENST00000504974 SLC38A5Q8WUX1 472 aa3.16□□□□□ -1.9
RFC1-209ENST00000504974 DNAAF4Q8WXU2 420 aa3.16□□□□□ -1.9
RFC1-209ENST00000504974 TAAR8Q969N4 342 aa3.16□□□□□ -1.9
RFC1-209ENST00000504974 QRFPRQ96P65 431 aa3.16□□□□□ -1.9
RFC1-209ENST00000504974 SYT17Q9BSW7 474 aa3.16□□□□□ -1.9
RFC1-209ENST00000504974 SPRY4Q9C004 299 aa3.16□□□□□ -1.9
RFC1-209ENST00000504974 RAD21L1Q9H4I0 556 aa3.16□□□□□ -1.9
RFC1-209ENST00000504974 C6orf106Q9H6K1 298 aaPredicted RBP3.16□□□□□ -1.9
RFC1-209ENST00000504974 LRRC4Q9HBW1 653 aa3.16□□□□□ -1.9
RFC1-209ENST00000504974 PDE7BQ9NP56 450 aa3.16□□□□□ -1.9
RFC1-209ENST00000504974 SMARCAL1Q9NZC9 954 aa3.16□□□□□ -1.9
RFC1-209ENST00000504974 MRPL15Q9P015 296 aaKnown RBP3.16□□□□□ -1.9
RFC1-209ENST00000504974 DBNLQ9UJU6 430 aaKnown RBP3.16□□□□□ -1.9
RFC1-209ENST00000504974 SNX8Q9Y5X2 465 aa3.16□□□□□ -1.9
RFC1-209ENST00000504974 PIK3C2GO75747 1445 aa3.16□□□□□ -1.9
RFC1-209ENST00000504974 DCCP43146 1447 aa3.16□□□□□ -1.9
RFC1-209ENST00000504974 PTPRUQ92729 1446 aa3.16□□□□□ -1.9
RFC1-209ENST00000504974 KAT6BQ8WYB5 2073 aa3.16□□□□□ -1.9
RFC1-209ENST00000504974 NALCNQ8IZF0 1738 aa3.16□□□□□ -1.9
RFC1-209ENST00000504974 NRXN1Q9ULB1 1477 aa3.16□□□□□ -1.9
RFC1-209ENST00000504974 CAMTA1Q9Y6Y1 1673 aa3.15□□□□□ -1.9
RFC1-209ENST00000504974 GOLGA6L9A6NEM1 432 aa3.15□□□□□ -1.91
RFC1-209ENST00000504974 SRRM3A6NNA2 597 aaPredicted RBP3.15□□□□□ -1.91
RFC1-209ENST00000504974 HNRNPCL2B2RXH8 293 aa3.15□□□□□ -1.91
RFC1-209ENST00000504974 SMAD9O15198 467 aaKnown RBP3.15□□□□□ -1.91
RFC1-209ENST00000504974 KCNAB3O43448 404 aa3.15□□□□□ -1.91
RFC1-209ENST00000504974 MITFO75030 526 aaPredicted RBP3.15□□□□□ -1.91
RFC1-209ENST00000504974 ENTPD3O75355 529 aa3.15□□□□□ -1.91
RFC1-209ENST00000504974 RSL1D1O76021 490 aaKnown RBP3.15□□□□□ -1.91
RFC1-209ENST00000504974 LINC00271P0C7V0 271 aa3.15□□□□□ -1.91
RFC1-209ENST00000504974 AKR1B1P15121 316 aa3.15□□□□□ -1.91
RFC1-209ENST00000504974 MYOD1P15172 320 aa3.15□□□□□ -1.91
RFC1-209ENST00000504974 HOXA13P31271 388 aaPredicted RBP3.15□□□□□ -1.91
RFC1-209ENST00000504974 KRT20P35900 424 aa3.15□□□□□ -1.91
RFC1-209ENST00000504974 NNMTP40261 264 aa3.15□□□□□ -1.91
RFC1-209ENST00000504974 APOBEC1P41238 236 aaKnown RBP3.15□□□□□ -1.91
RFC1-209ENST00000504974 MATR3P43243 847 aaKnown RBP eCLIP3.15□□□□□ -1.91
RFC1-209ENST00000504974 SUOXP51687 545 aa3.15□□□□□ -1.91
RFC1-209ENST00000504974 ART1P52961 327 aa3.15□□□□□ -1.91
RFC1-209ENST00000504974 CLDN20P56880 219 aa3.15□□□□□ -1.91
RFC1-209ENST00000504974 SEC61A1P61619 476 aaKnown RBP3.15□□□□□ -1.91
RFC1-209ENST00000504974 MRPS5P82675 430 aaKnown RBP3.15□□□□□ -1.91
RFC1-209ENST00000504974 NUCB1Q02818 461 aa3.15□□□□□ -1.91
RFC1-209ENST00000504974 SLC20A2Q08357 652 aa3.15□□□□□ -1.91
RFC1-209ENST00000504974 NTRK2Q16620 822 aa3.15□□□□□ -1.91
RFC1-209ENST00000504974 DECR1Q16698 335 aa3.15□□□□□ -1.91
RFC1-209ENST00000504974 MEP1AQ16819 746 aa3.15□□□□□ -1.91
RFC1-209ENST00000504974 MYLK3Q32MK0 819 aa3.15□□□□□ -1.91
RFC1-209ENST00000504974 BMP2KLQ5H9B9 411 aa3.15□□□□□ -1.91
RFC1-209ENST00000504974 FAM122CQ6P4D5 195 aa3.15□□□□□ -1.91
RFC1-209ENST00000504974 PAPD4Q6PIY7 484 aaKnown RBP3.15□□□□□ -1.91
RFC1-209ENST00000504974 BRAT1Q6PJG6 821 aa3.15□□□□□ -1.91
RFC1-209ENST00000504974 TMCO3Q6UWJ1 677 aa3.15□□□□□ -1.91
RFC1-209ENST00000504974 RAD9BQ6WBX8 426 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms