RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 PIK3CAP42336 1068 aa5.66□□□□□ -1.5
NIPBL-203ENST00000503274 PRCPP42785 496 aa5.66□□□□□ -1.5
NIPBL-203ENST00000503274 NLRP5P59047 1200 aa5.66□□□□□ -1.5
NIPBL-203ENST00000503274 TAS2R38P59533 333 aa5.66□□□□□ -1.5
NIPBL-203ENST00000503274 PRAMEP78395 509 aa5.66□□□□□ -1.5
NIPBL-203ENST00000503274 TFAP4Q01664 338 aa5.66□□□□□ -1.5
NIPBL-203ENST00000503274 POU3F1Q03052 451 aaPredicted RBP5.66□□□□□ -1.5
NIPBL-203ENST00000503274 SLC20A2Q08357 652 aa5.66□□□□□ -1.5
NIPBL-203ENST00000503274 ZBTB17Q13105 803 aa5.66□□□□□ -1.5
NIPBL-203ENST00000503274 DECR1Q16698 335 aa5.66□□□□□ -1.5
NIPBL-203ENST00000503274 GPATCH4Q5T3I0 446 aaKnown RBP5.66□□□□□ -1.5
NIPBL-203ENST00000503274 KLHL35Q6PF15 583 aa5.66□□□□□ -1.5
NIPBL-203ENST00000503274 BRAT1Q6PJG6 821 aa5.66□□□□□ -1.5
NIPBL-203ENST00000503274 TUBA1AQ71U36 451 aa5.66□□□□□ -1.5
NIPBL-203ENST00000503274 ODF3L1Q8IXM7 274 aa5.66□□□□□ -1.5
NIPBL-203ENST00000503274 RNF113BQ8IZP6 322 aaKnown RBP5.66□□□□□ -1.5
NIPBL-203ENST00000503274 DUSP19Q8WTR2 217 aa5.66□□□□□ -1.5
NIPBL-203ENST00000503274 SORCS1Q8WY21 1168 aa5.66□□□□□ -1.5
NIPBL-203ENST00000503274 ZKSCAN4Q969J2 545 aaPredicted RBP5.66□□□□□ -1.5
NIPBL-203ENST00000503274 ABTB1Q969K4 478 aaPredicted RBP5.66□□□□□ -1.5
NIPBL-203ENST00000503274 TAAR8Q969N4 342 aa5.66□□□□□ -1.5
NIPBL-203ENST00000503274 RHBDF1Q96CC6 855 aa5.66□□□□□ -1.5
NIPBL-203ENST00000503274 TUBA1CQ9BQE3 449 aa5.66□□□□□ -1.5
NIPBL-203ENST00000503274 ZNF556Q9HAH1 456 aa5.66□□□□□ -1.5
NIPBL-203ENST00000503274 EBF2Q9HAK2 575 aa5.66□□□□□ -1.5
NIPBL-203ENST00000503274 TMEM30AQ9NV96 361 aa5.66□□□□□ -1.5
NIPBL-203ENST00000503274 PADI1Q9ULC6 663 aa5.66□□□□□ -1.5
NIPBL-203ENST00000503274 SHANK3Q9BYB0 1731 aa5.65□□□□□ -1.5
NIPBL-203ENST00000503274 MYO1GB0I1T2 1018 aa5.65□□□□□ -1.5
NIPBL-203ENST00000503274 ATP2A1O14983 1001 aa5.65□□□□□ -1.5
NIPBL-203ENST00000503274 DAB1O75553 588 aa5.65□□□□□ -1.5
NIPBL-203ENST00000503274 CORO1AP31146 461 aaKnown RBP5.65□□□□□ -1.5
NIPBL-203ENST00000503274 MAPK4P31152 587 aa5.65□□□□□ -1.5
NIPBL-203ENST00000503274 GALCP54803 685 aa5.65□□□□□ -1.5
NIPBL-203ENST00000503274 ARF3P61204 181 aaPredicted RBP5.65□□□□□ -1.5
NIPBL-203ENST00000503274 ARF1P84077 181 aaKnown RBP5.65□□□□□ -1.5
NIPBL-203ENST00000503274 MAD2L1Q13257 205 aaPredicted RBP5.65□□□□□ -1.5
NIPBL-203ENST00000503274 PNLIPRP3Q17RR3 467 aa5.65□□□□□ -1.5
NIPBL-203ENST00000503274 WBP2NLQ6ICG8 309 aa5.65□□□□□ -1.5
NIPBL-203ENST00000503274 TRNP1Q6NT89 227 aa5.65□□□□□ -1.5
NIPBL-203ENST00000503274 C4orf50Q6ZRC1 276 aa5.65□□□□□ -1.5
NIPBL-203ENST00000503274 EXOC3L1Q86VI1 746 aa5.65□□□□□ -1.5
NIPBL-203ENST00000503274 NRROSQ86YC3 692 aa5.65□□□□□ -1.5
NIPBL-203ENST00000503274 C1orf87Q8N0U7 546 aa5.65□□□□□ -1.5
NIPBL-203ENST00000503274 NAGSQ8N159 534 aa5.65□□□□□ -1.5
NIPBL-203ENST00000503274 HMGCLL1Q8TB92 370 aa5.65□□□□□ -1.5
NIPBL-203ENST00000503274 SLC20A1Q8WUM9 679 aa5.65□□□□□ -1.5
NIPBL-203ENST00000503274 CDCA5Q96FF9 252 aa5.65□□□□□ -1.5
NIPBL-203ENST00000503274 LMLNQ96KR4 655 aa5.65□□□□□ -1.5
NIPBL-203ENST00000503274 CMTM3Q96MX0 182 aa5.65□□□□□ -1.5
NIPBL-203ENST00000503274 NCAPGQ9BPX3 1015 aa5.65□□□□□ -1.5
NIPBL-203ENST00000503274 MAF1Q9H063 256 aa5.65□□□□□ -1.5
NIPBL-203ENST00000503274 SH2D4AQ9H788 454 aa5.65□□□□□ -1.5
NIPBL-203ENST00000503274 KAT14Q9H8E8 782 aa5.65□□□□□ -1.5
NIPBL-203ENST00000503274 EIF2B3Q9NR50 452 aaKnown RBP5.65□□□□□ -1.5
NIPBL-203ENST00000503274 PLSCR4Q9NRQ2 329 aa5.65□□□□□ -1.5
NIPBL-203ENST00000503274 UBA2Q9UBT2 640 aaPredicted RBP5.65□□□□□ -1.5
NIPBL-203ENST00000503274 R3HDM2Q9Y2K5 976 aaKnown RBP5.65□□□□□ -1.5
NIPBL-203ENST00000503274 CLIC4Q9Y696 253 aa5.65□□□□□ -1.5
NIPBL-203ENST00000503274 C5P01031 1676 aa5.65□□□□□ -1.51
NIPBL-203ENST00000503274 PKD1L3Q7Z443 1732 aa5.65□□□□□ -1.51
NIPBL-203ENST00000503274 ITGB4P16144 1822 aa5.64□□□□□ -1.51
NIPBL-203ENST00000503274 PRAC2D3DTV9 90 aa5.64□□□□□ -1.51
NIPBL-203ENST00000503274 CAMTA2O94983 1202 aa5.64□□□□□ -1.51
NIPBL-203ENST00000503274 MCM3P25205 808 aa5.64□□□□□ -1.51
NIPBL-203ENST00000503274 GNL1P36915 607 aaPredicted RBP5.64□□□□□ -1.51
NIPBL-203ENST00000503274 UBA7P41226 1012 aa5.64□□□□□ -1.51
NIPBL-203ENST00000503274 APOBEC1P41238 236 aaKnown RBP5.64□□□□□ -1.51
NIPBL-203ENST00000503274 TAS2R40P59535 323 aa5.64□□□□□ -1.51
NIPBL-203ENST00000503274 C1QTNF8P60827 252 aa5.64□□□□□ -1.51
NIPBL-203ENST00000503274 MRPS34P82930 218 aaKnown RBP5.64□□□□□ -1.51
NIPBL-203ENST00000503274 RELQ04864 619 aaPredicted RBP5.64□□□□□ -1.51
NIPBL-203ENST00000503274 CRYMQ14894 314 aa5.64□□□□□ -1.51
NIPBL-203ENST00000503274 LRIF1Q5T3J3 769 aa5.64□□□□□ -1.51
NIPBL-203ENST00000503274 GKAP1Q5VSY0 366 aaPredicted RBP5.64□□□□□ -1.51
NIPBL-203ENST00000503274 GFRALQ6UXV0 394 aa5.64□□□□□ -1.51
NIPBL-203ENST00000503274 TMEM219Q86XT9 240 aa5.64□□□□□ -1.51
NIPBL-203ENST00000503274 POC1AQ8NBT0 407 aa5.64□□□□□ -1.51
NIPBL-203ENST00000503274 LNX1Q8TBB1 728 aaPredicted RBP5.64□□□□□ -1.51
NIPBL-203ENST00000503274 SCFD2Q8WU76 684 aa5.64□□□□□ -1.51
NIPBL-203ENST00000503274 QRFPRQ96P65 431 aa5.64□□□□□ -1.51
NIPBL-203ENST00000503274 PCYT2Q99447 389 aa5.64□□□□□ -1.51
NIPBL-203ENST00000503274 SIL1Q9H173 461 aa5.64□□□□□ -1.51
NIPBL-203ENST00000503274 MAGIXQ9H6Y5 334 aa5.64□□□□□ -1.51
NIPBL-203ENST00000503274 EVA1AQ9H8M9 152 aa5.64□□□□□ -1.51
NIPBL-203ENST00000503274 SEPT11Q9NVA2 429 aaKnown RBP5.64□□□□□ -1.51
NIPBL-203ENST00000503274 COPG2Q9UBF2 871 aa5.64□□□□□ -1.51
NIPBL-203ENST00000503274 FBXL2Q9UKC9 423 aa5.64□□□□□ -1.51
NIPBL-203ENST00000503274 ANKRD26Q9UPS8 1709 aa5.64□□□□□ -1.51
NIPBL-203ENST00000503274 C4BP0C0L5 1744 aa5.63□□□□□ -1.51
NIPBL-203ENST00000503274 COL24A1Q17RW2 1714 aa5.63□□□□□ -1.51
NIPBL-203ENST00000503274 TAF1LQ8IZX4 1826 aa5.63□□□□□ -1.51
NIPBL-203ENST00000503274 TUBGCP6Q96RT7 1819 aa5.63□□□□□ -1.51
NIPBL-203ENST00000503274 FRMD3A2A2Y4 597 aa5.63□□□□□ -1.51
NIPBL-203ENST00000503274 LILRA5A6NI73 299 aa5.63□□□□□ -1.51
NIPBL-203ENST00000503274 HS3ST1O14792 307 aa5.63□□□□□ -1.51
NIPBL-203ENST00000503274 ZBED4O75132 1171 aa5.63□□□□□ -1.51
NIPBL-203ENST00000503274 MMP10P09238 476 aa5.63□□□□□ -1.51
NIPBL-203ENST00000503274 TMEM11P17152 192 aa5.63□□□□□ -1.51
NIPBL-203ENST00000503274 USP8P40818 1118 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms