RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 GRAP2O75791 330 aa3.9□□□□□ -1.78
CLTC-209ENST00000498711 KRT19P08727 400 aa3.9□□□□□ -1.78
CLTC-209ENST00000498711 CLEC2LP0C7M8 214 aa3.9□□□□□ -1.78
CLTC-209ENST00000498711 PSMC3P17980 439 aa3.9□□□□□ -1.78
CLTC-209ENST00000498711 RPL10P27635 214 aaKnown RBP3.9□□□□□ -1.78
CLTC-209ENST00000498711 GJA4P35212 333 aa3.9□□□□□ -1.78
CLTC-209ENST00000498711 ADMP35318 185 aa3.9□□□□□ -1.78
CLTC-209ENST00000498711 ADRA1BP35368 520 aa3.9□□□□□ -1.78
CLTC-209ENST00000498711 GMPRP36959 345 aa3.9□□□□□ -1.78
CLTC-209ENST00000498711 ARL4AP40617 200 aa3.9□□□□□ -1.78
CLTC-209ENST00000498711 CD97P48960 835 aa3.9□□□□□ -1.78
CLTC-209ENST00000498711 RGS7P49802 495 aa3.9□□□□□ -1.78
CLTC-209ENST00000498711 NUDT2P50583 147 aa3.9□□□□□ -1.78
CLTC-209ENST00000498711 CLCN7P51798 805 aa3.9□□□□□ -1.78
CLTC-209ENST00000498711 ADARP55265 1226 aaKnown RBP3.9□□□□□ -1.78
CLTC-209ENST00000498711 NUP107P57740 925 aa3.9□□□□□ -1.78
CLTC-209ENST00000498711 MRPS22P82650 360 aaKnown RBP3.9□□□□□ -1.78
CLTC-209ENST00000498711 ARHGAP1Q07960 439 aa3.9□□□□□ -1.78
CLTC-209ENST00000498711 FOXM1Q08050 763 aa3.9□□□□□ -1.78
CLTC-209ENST00000498711 STX5Q13190 355 aa3.9□□□□□ -1.78
CLTC-209ENST00000498711 SIM2Q14190 667 aaPredicted RBP3.9□□□□□ -1.78
CLTC-209ENST00000498711 CDO1Q16878 200 aa3.9□□□□□ -1.78
CLTC-209ENST00000498711 CT83Q5H943 113 aa3.9□□□□□ -1.78
CLTC-209ENST00000498711 PCID2Q5JVF3 399 aa3.9□□□□□ -1.78
CLTC-209ENST00000498711 MARCH8Q5T0T0 291 aa3.9□□□□□ -1.78
CLTC-209ENST00000498711 FAM182AQ5T1J6 154 aa3.9□□□□□ -1.78
CLTC-209ENST00000498711 MBNL2Q5VZF2 373 aaKnown RBP3.9□□□□□ -1.78
CLTC-209ENST00000498711 LCN8Q6JVE9 175 aa3.9□□□□□ -1.78
CLTC-209ENST00000498711 DUS1LQ6P1R4 473 aaKnown RBP3.9□□□□□ -1.78
CLTC-209ENST00000498711 SCYL2Q6P3W7 929 aa3.9□□□□□ -1.78
CLTC-209ENST00000498711 KLHL35Q6PF15 583 aa3.9□□□□□ -1.78
CLTC-209ENST00000498711 CNSTQ6PJW8 725 aa3.9□□□□□ -1.78
CLTC-209ENST00000498711 LARP4Q71RC2 724 aaKnown RBP eCLIP3.9□□□□□ -1.78
CLTC-209ENST00000498711 ZNF765Q7L2R6 523 aa3.9□□□□□ -1.78
CLTC-209ENST00000498711 TMPRSS7Q7RTY8 843 aa3.9□□□□□ -1.78
CLTC-209ENST00000498711 ZNF554Q86TJ5 538 aa3.9□□□□□ -1.78
CLTC-209ENST00000498711 KCNMB4Q86W47 210 aa3.9□□□□□ -1.78
CLTC-209ENST00000498711 DEFB106AQ8N104 65 aa3.9□□□□□ -1.78
CLTC-209ENST00000498711 PRR18Q8N4B5 295 aa3.9□□□□□ -1.78
CLTC-209ENST00000498711 MINDY1Q8N5J2 469 aa3.9□□□□□ -1.78
CLTC-209ENST00000498711 TERB1Q8NA31 727 aa3.9□□□□□ -1.78
CLTC-209ENST00000498711 TMEM52Q8NDY8 209 aa3.9□□□□□ -1.78
CLTC-209ENST00000498711 CEP70Q8NHQ1 597 aa3.9□□□□□ -1.78
CLTC-209ENST00000498711 AUTS2Q8WXX7 1259 aa3.9□□□□□ -1.78
CLTC-209ENST00000498711 FEM1CQ96JP0 617 aa3.9□□□□□ -1.78
CLTC-209ENST00000498711 SLC45A3Q96JT2 553 aa3.9□□□□□ -1.78
CLTC-209ENST00000498711 MEGF10Q96KG7 1140 aa3.9□□□□□ -1.78
CLTC-209ENST00000498711 SGCZQ96LD1 299 aa3.9□□□□□ -1.78
CLTC-209ENST00000498711 HSPA12BQ96MM6 686 aa3.9□□□□□ -1.78
CLTC-209ENST00000498711 ZMAT2Q96NC0 199 aaKnown RBP3.9□□□□□ -1.78
CLTC-209ENST00000498711 FCRL5Q96RD9 977 aa3.9□□□□□ -1.78
CLTC-209ENST00000498711 IL12RB2Q99665 862 aa3.9□□□□□ -1.78
CLTC-209ENST00000498711 MRPL57Q9BQC6 102 aaKnown RBP3.9□□□□□ -1.78
CLTC-209ENST00000498711 HTATIP2Q9BUP3 242 aa3.9□□□□□ -1.78
CLTC-209ENST00000498711 APOL5Q9BWW9 433 aa3.9□□□□□ -1.78
CLTC-209ENST00000498711 NPLQ9BXD5 320 aaPredicted RBP3.9□□□□□ -1.78
CLTC-209ENST00000498711 DUSP16Q9BY84 665 aa3.9□□□□□ -1.78
CLTC-209ENST00000498711 KATNBL1Q9H079 304 aa3.9□□□□□ -1.78
CLTC-209ENST00000498711 SPATC1LQ9H0A9 340 aa3.9□□□□□ -1.78
CLTC-209ENST00000498711 HIPK3Q9H422 1215 aa3.9□□□□□ -1.78
CLTC-209ENST00000498711 PALMDQ9NP74 551 aa3.9□□□□□ -1.78
CLTC-209ENST00000498711 RRN3Q9NYV6 651 aa3.9□□□□□ -1.78
CLTC-209ENST00000498711 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.9□□□□□ -1.782e-8■■■■□ 24.4
CLTC-209ENST00000498711 BFARQ9NZS9 450 aa3.9□□□□□ -1.78
CLTC-209ENST00000498711 FBXW11Q9UKB1 542 aa3.9□□□□□ -1.78
CLTC-209ENST00000498711 GTF2A1LQ9UNN4 478 aa3.9□□□□□ -1.78
CLTC-209ENST00000498711 B3GNT3Q9Y2A9 372 aa3.9□□□□□ -1.78
CLTC-209ENST00000498711 HES2Q9Y543 173 aa3.9□□□□□ -1.78
CLTC-209ENST00000498711 A0A1B0GTW7 788 aa3.9□□□□□ -1.79
CLTC-209ENST00000498711 TCRBV5S2A0A599 114 aa3.9□□□□□ -1.79
CLTC-209ENST00000498711 BBIP1A8MTZ0 92 aa3.9□□□□□ -1.79
CLTC-209ENST00000498711 HHLA1C9JL84 531 aa3.9□□□□□ -1.79
CLTC-209ENST00000498711 E7ENX8 843 aa3.9□□□□□ -1.79
CLTC-209ENST00000498711 H0Y858 1186 aa3.9□□□□□ -1.79
CLTC-209ENST00000498711 PDHXO00330 501 aa3.9□□□□□ -1.79
CLTC-209ENST00000498711 PLOD2O00469 737 aa3.9□□□□□ -1.79
CLTC-209ENST00000498711 PPEF2O14830 753 aa3.9□□□□□ -1.79
CLTC-209ENST00000498711 AIM2O14862 343 aa3.9□□□□□ -1.79
CLTC-209ENST00000498711 HNRNPRO43390 633 aaKnown RBP3.9□□□□□ -1.79
CLTC-209ENST00000498711 UBXN7O94888 489 aa3.9□□□□□ -1.79
CLTC-209ENST00000498711 PRSS23O95084 383 aa3.9□□□□□ -1.79
CLTC-209ENST00000498711 MATN4O95460 622 aa3.9□□□□□ -1.79
CLTC-209ENST00000498711 CPNE6O95741 557 aa3.9□□□□□ -1.79
CLTC-209ENST00000498711 IGLV3-25P01717 112 aa3.9□□□□□ -1.79
CLTC-209ENST00000498711 AHSGP02765 367 aa3.9□□□□□ -1.79
CLTC-209ENST00000498711 JUNP05412 331 aaKnown RBP3.9□□□□□ -1.79
CLTC-209ENST00000498711 GJB1P08034 283 aa3.9□□□□□ -1.79
CLTC-209ENST00000498711 GPX3P22352 226 aa3.9□□□□□ -1.79
CLTC-209ENST00000498711 ATP5F1P24539 256 aaPredicted RBP3.9□□□□□ -1.79
CLTC-209ENST00000498711 NMBRP28336 390 aa3.9□□□□□ -1.79
CLTC-209ENST00000498711 LRPAP1P30533 357 aa3.9□□□□□ -1.79
CLTC-209ENST00000498711 TTKP33981 857 aa3.9□□□□□ -1.79
CLTC-209ENST00000498711 HTR7P34969 479 aa3.9□□□□□ -1.79
CLTC-209ENST00000498711 RANBP1P43487 201 aa3.9□□□□□ -1.79
CLTC-209ENST00000498711 NDST2P52849 883 aa3.9□□□□□ -1.79
CLTC-209ENST00000498711 SESN2P58004 480 aaPredicted RBP3.9□□□□□ -1.79
CLTC-209ENST00000498711 CRADDP78560 199 aa3.9□□□□□ -1.79
CLTC-209ENST00000498711 ADARB1P78563 741 aaKnown RBP3.9□□□□□ -1.79
CLTC-209ENST00000498711 MPP1Q00013 466 aa3.9□□□□□ -1.79
CLTC-209ENST00000498711 SP4Q02446 784 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms