RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 SCGB1D1O95968 90 aa5.28□□□□□ -1.56
SF3B1-212ENST00000496458 ACTN1P12814 892 aa5.28□□□□□ -1.56
SF3B1-212ENST00000496458 NR0B1P51843 470 aaKnown RBP5.28□□□□□ -1.56
SF3B1-212ENST00000496458 PRAMEP78395 509 aa5.28□□□□□ -1.56
SF3B1-212ENST00000496458 SPOCK1Q08629 439 aa5.28□□□□□ -1.56
SF3B1-212ENST00000496458 UBE2V1Q13404 147 aa5.28□□□□□ -1.56
SF3B1-212ENST00000496458 CCDC6Q16204 474 aa5.28□□□□□ -1.56
SF3B1-212ENST00000496458 ZNF876PQ49A33 203 aa5.28□□□□□ -1.56
SF3B1-212ENST00000496458 JADE1Q6IE81 842 aa5.28□□□□□ -1.56
SF3B1-212ENST00000496458 TMEM154Q6P9G4 183 aa5.28□□□□□ -1.56
SF3B1-212ENST00000496458 CLEC17AQ6ZS10 378 aa5.28□□□□□ -1.56
SF3B1-212ENST00000496458 FCAMRQ8WWV6 532 aa5.28□□□□□ -1.56
SF3B1-212ENST00000496458 WBP2Q969T9 261 aa5.28□□□□□ -1.56
SF3B1-212ENST00000496458 OR2A14Q96R47 310 aa5.28□□□□□ -1.56
SF3B1-212ENST00000496458 RAD21L1Q9H4I0 556 aa5.28□□□□□ -1.56
SF3B1-212ENST00000496458 SLC38A7Q9NVC3 462 aa5.28□□□□□ -1.56
SF3B1-212ENST00000496458 RCC2Q9P258 522 aaKnown RBP5.28□□□□□ -1.56
SF3B1-212ENST00000496458 YIPF1Q9Y548 306 aa5.28□□□□□ -1.56
SF3B1-212ENST00000496458 SESN1Q9Y6P5 492 aa5.28□□□□□ -1.56
SF3B1-212ENST00000496458 FRMD3A2A2Y4 597 aa5.27□□□□□ -1.57
SF3B1-212ENST00000496458 C15orf62A8K5M9 175 aa5.27□□□□□ -1.57
SF3B1-212ENST00000496458 MYO1GB0I1T2 1018 aa5.27□□□□□ -1.57
SF3B1-212ENST00000496458 PLK4O00444 970 aa5.27□□□□□ -1.57
SF3B1-212ENST00000496458 PCDH7O60245 1069 aa5.27□□□□□ -1.57
SF3B1-212ENST00000496458 TMCC2O75069 709 aa5.27□□□□□ -1.57
SF3B1-212ENST00000496458 SRPRAP08240 638 aaKnown RBP5.27□□□□□ -1.57
SF3B1-212ENST00000496458 PATE4P0C8F1 98 aa5.27□□□□□ -1.57
SF3B1-212ENST00000496458 MSH3P20585 1137 aa5.27□□□□□ -1.57
SF3B1-212ENST00000496458 CAMPP49913 170 aa5.27□□□□□ -1.57
SF3B1-212ENST00000496458 EIF4G1Q04637 1599 aaKnown RBP5.27□□□□□ -1.57
SF3B1-212ENST00000496458 MAMLD1Q13495 774 aa5.27□□□□□ -1.57
SF3B1-212ENST00000496458 MEP1AQ16819 746 aa5.27□□□□□ -1.57
SF3B1-212ENST00000496458 DUOXA1Q1HG43 343 aa5.27□□□□□ -1.57
SF3B1-212ENST00000496458 LCE1EQ5T753 118 aa5.27□□□□□ -1.57
SF3B1-212ENST00000496458 NDUFAF5Q5TEU4 345 aa5.27□□□□□ -1.57
SF3B1-212ENST00000496458 ARHGAP17Q68EM7 881 aa5.27□□□□□ -1.57
SF3B1-212ENST00000496458 KIAA0930Q6ICG6 404 aaPredicted RBP5.27□□□□□ -1.57
SF3B1-212ENST00000496458 TPRG1Q6ZUI0 275 aa5.27□□□□□ -1.57
SF3B1-212ENST00000496458 TRPT1Q86TN4 253 aaKnown RBP5.27□□□□□ -1.57
SF3B1-212ENST00000496458 CEP97Q8IW35 865 aa5.27□□□□□ -1.57
SF3B1-212ENST00000496458 TEX11Q8IYF3 940 aa5.27□□□□□ -1.57
SF3B1-212ENST00000496458 WDTC1Q8N5D0 677 aa5.27□□□□□ -1.57
SF3B1-212ENST00000496458 NGEFQ8N5V2 710 aa5.27□□□□□ -1.57
SF3B1-212ENST00000496458 WDSUB1Q8N9V3 476 aa5.27□□□□□ -1.57
SF3B1-212ENST00000496458 ZNF473Q8WTR7 871 aaKnown RBP5.27□□□□□ -1.57
SF3B1-212ENST00000496458 HDAC2Q92769 488 aaKnown RBP5.27□□□□□ -1.57
SF3B1-212ENST00000496458 PRMT6Q96LA8 375 aaPredicted RBP5.27□□□□□ -1.57
SF3B1-212ENST00000496458 FSD1Q9BTV5 496 aa5.27□□□□□ -1.57
SF3B1-212ENST00000496458 RBM4Q9BWF3 364 aaKnown RBP5.27□□□□□ -1.57
SF3B1-212ENST00000496458 APOBEC3GQ9HC16 384 aaKnown RBP5.27□□□□□ -1.57
SF3B1-212ENST00000496458 SLC52A3Q9NQ40 469 aa5.27□□□□□ -1.57
SF3B1-212ENST00000496458 PTTG2Q9NZH5 202 aa5.27□□□□□ -1.57
SF3B1-212ENST00000496458 ZNF69Q9UC07 566 aa5.27□□□□□ -1.57
SF3B1-212ENST00000496458 NRBP1Q9UHY1 535 aa5.27□□□□□ -1.57
SF3B1-212ENST00000496458 TSPYL4Q9UJ04 414 aa5.27□□□□□ -1.57
SF3B1-212ENST00000496458 OR2M5A3KFT3 312 aa5.26□□□□□ -1.57
SF3B1-212ENST00000496458 TMEM8BA6NDV4 472 aa5.26□□□□□ -1.57
SF3B1-212ENST00000496458 PGPEP1LA6NFU8 196 aa5.26□□□□□ -1.57
SF3B1-212ENST00000496458 H0YIN7 160 aa5.26□□□□□ -1.57
SF3B1-212ENST00000496458 USO1O60763 962 aaKnown RBP5.26□□□□□ -1.57
SF3B1-212ENST00000496458 SELLP14151 372 aa5.26□□□□□ -1.57
SF3B1-212ENST00000496458 TNFAIP3P21580 790 aa5.26□□□□□ -1.57
SF3B1-212ENST00000496458 NR2C2P49116 596 aa5.26□□□□□ -1.57
SF3B1-212ENST00000496458 MMP15P51511 669 aa5.26□□□□□ -1.57
SF3B1-212ENST00000496458 IKQ13123 557 aaPredicted RBP5.26□□□□□ -1.57
SF3B1-212ENST00000496458 TMEM30BQ3MIR4 351 aa5.26□□□□□ -1.57
SF3B1-212ENST00000496458 ZC2HC1CQ53FD0 456 aaPredicted RBP5.26□□□□□ -1.57
SF3B1-212ENST00000496458 ZDHHC20Q5W0Z9 365 aa5.26□□□□□ -1.57
SF3B1-212ENST00000496458 KRTAP5-11Q6L8G4 156 aa5.26□□□□□ -1.57
SF3B1-212ENST00000496458 RBMS3Q6XE24 437 aaKnown RBP5.26□□□□□ -1.57
SF3B1-212ENST00000496458 ZNF534Q76KX8 674 aa5.26□□□□□ -1.57
SF3B1-212ENST00000496458 PTOV1Q86YD1 416 aa5.26□□□□□ -1.57
SF3B1-212ENST00000496458 TICAM1Q8IUC6 712 aa5.26□□□□□ -1.57
SF3B1-212ENST00000496458 GALNT13Q8IUC8 556 aa5.26□□□□□ -1.57
SF3B1-212ENST00000496458 ANKRD52Q8NB46 1076 aa5.26□□□□□ -1.57
SF3B1-212ENST00000496458 SCFD2Q8WU76 684 aa5.26□□□□□ -1.57
SF3B1-212ENST00000496458 USP6NLQ92738 828 aa5.26□□□□□ -1.57
SF3B1-212ENST00000496458 MOAP1Q96BY2 351 aa5.26□□□□□ -1.57
SF3B1-212ENST00000496458 LITAFQ99732 161 aa5.26□□□□□ -1.57
SF3B1-212ENST00000496458 PSD2Q9BQI7 771 aa5.26□□□□□ -1.57
SF3B1-212ENST00000496458 TMX4Q9H1E5 349 aaPredicted RBP5.26□□□□□ -1.57
SF3B1-212ENST00000496458 ZBTB20Q9HC78 741 aaPredicted RBP5.26□□□□□ -1.57
SF3B1-212ENST00000496458 TRMT1Q9NXH9 659 aaKnown RBP5.26□□□□□ -1.57
SF3B1-212ENST00000496458 OGFRQ9NZT2 677 aa5.26□□□□□ -1.57
SF3B1-212ENST00000496458 CC2D2AQ9P2K1 1620 aa5.26□□□□□ -1.57
SF3B1-212ENST00000496458 PI4KAP2A4QPH2 592 aa5.25□□□□□ -1.57
SF3B1-212ENST00000496458 ACADMP11310 421 aa5.25□□□□□ -1.57
SF3B1-212ENST00000496458 MAPK4P31152 587 aa5.25□□□□□ -1.57
SF3B1-212ENST00000496458 CDH8P55286 799 aa5.25□□□□□ -1.57
SF3B1-212ENST00000496458 DDX10Q13206 875 aaKnown RBP5.25□□□□□ -1.57
SF3B1-212ENST00000496458 CRYMQ14894 314 aa5.25□□□□□ -1.57
SF3B1-212ENST00000496458 RARS2Q5T160 578 aaKnown RBP5.25□□□□□ -1.57
SF3B1-212ENST00000496458 CCDC30Q5VVM6 783 aa5.25□□□□□ -1.57
SF3B1-212ENST00000496458 RSRC2Q7L4I2 434 aaKnown RBP5.25□□□□□ -1.57
SF3B1-212ENST00000496458 MAATS1Q7Z4T9 603 aa5.25□□□□□ -1.57
SF3B1-212ENST00000496458 TAS1R2Q8TE23 839 aa5.25□□□□□ -1.57
SF3B1-212ENST00000496458 SMPDL3BQ92485 455 aa5.25□□□□□ -1.57
SF3B1-212ENST00000496458 LGALS12Q96DT0 336 aa5.25□□□□□ -1.57
SF3B1-212ENST00000496458 DDOQ99489 341 aa5.25□□□□□ -1.57
SF3B1-212ENST00000496458 BARHL1Q9BZE3 327 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms