RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 BLZF1Q9H2G9 400 aa5.29□□□□□ -1.56
PTPN4-210ENST00000485247 AKIRIN1Q9H9L7 192 aaPredicted RBP5.29□□□□□ -1.56
PTPN4-210ENST00000485247 POPDC2Q9HBU9 364 aa5.29□□□□□ -1.56
PTPN4-210ENST00000485247 TMEM8AQ9HCN3 771 aa5.29□□□□□ -1.56
PTPN4-210ENST00000485247 LHX9Q9NQ69 397 aa5.29□□□□□ -1.56
PTPN4-210ENST00000485247 AGPAT4Q9NRZ5 378 aa5.29□□□□□ -1.56
PTPN4-210ENST00000485247 DDIT4Q9NX09 232 aa5.29□□□□□ -1.56
PTPN4-210ENST00000485247 GPR83Q9NYM4 423 aa5.29□□□□□ -1.56
PTPN4-210ENST00000485247 MPP6Q9NZW5 540 aa5.29□□□□□ -1.56
PTPN4-210ENST00000485247 SNX10Q9Y5X0 201 aa5.29□□□□□ -1.56
PTPN4-210ENST00000485247 TACC2O95359 2948 aa5.28□□□□□ -1.56
PTPN4-210ENST00000485247 SH3D21A4FU49 640 aa5.28□□□□□ -1.56
PTPN4-210ENST00000485247 C21orf140B9A014 251 aa5.28□□□□□ -1.56
PTPN4-210ENST00000485247 C22orf46C9J442 243 aa5.28□□□□□ -1.56
PTPN4-210ENST00000485247 KCNN4O15554 427 aa5.28□□□□□ -1.56
PTPN4-210ENST00000485247 TEX33O43247 280 aa5.28□□□□□ -1.56
PTPN4-210ENST00000485247 GRID2O43424 1007 aa5.28□□□□□ -1.56
PTPN4-210ENST00000485247 ZMPSTE24O75844 475 aa5.28□□□□□ -1.56
PTPN4-210ENST00000485247 TMEM63AO94886 807 aa5.28□□□□□ -1.56
PTPN4-210ENST00000485247 POP4O95707 220 aaKnown RBP5.28□□□□□ -1.56
PTPN4-210ENST00000485247 CD160O95971 181 aa5.28□□□□□ -1.56
PTPN4-210ENST00000485247 PLEKP08567 350 aaPredicted RBP5.28□□□□□ -1.56
PTPN4-210ENST00000485247 KRT13P13646 458 aa5.28□□□□□ -1.56
PTPN4-210ENST00000485247 XPAP23025 273 aaPredicted RBP5.28□□□□□ -1.56
PTPN4-210ENST00000485247 PTPN4P29074 926 aa5.28□□□□□ -1.56
PTPN4-210ENST00000485247 HOXC12P31275 282 aa5.28□□□□□ -1.56
PTPN4-210ENST00000485247 MAPK9P45984 424 aa5.28□□□□□ -1.56
PTPN4-210ENST00000485247 GNPDA1P46926 289 aa5.28□□□□□ -1.56
PTPN4-210ENST00000485247 KIAA1024LP59773 190 aa5.28□□□□□ -1.56
PTPN4-210ENST00000485247 YWHAZP63104 245 aaKnown RBP5.28□□□□□ -1.56
PTPN4-210ENST00000485247 SLC20A2Q08357 652 aa5.28□□□□□ -1.56
PTPN4-210ENST00000485247 NME3Q13232 169 aa5.28□□□□□ -1.56
PTPN4-210ENST00000485247 EIF4EBP2Q13542 120 aaPredicted RBP5.28□□□□□ -1.56
PTPN4-210ENST00000485247 CUL2Q13617 745 aa5.28□□□□□ -1.56
PTPN4-210ENST00000485247 POLD3Q15054 466 aaPredicted RBP5.28□□□□□ -1.56
PTPN4-210ENST00000485247 TAF5Q15542 800 aa5.28□□□□□ -1.56
PTPN4-210ENST00000485247 KYNUQ16719 465 aa5.28□□□□□ -1.56
PTPN4-210ENST00000485247 MYLK3Q32MK0 819 aa5.28□□□□□ -1.56
PTPN4-210ENST00000485247 C5orf22Q49AR2 442 aa5.28□□□□□ -1.56
PTPN4-210ENST00000485247 TMEM52BQ4KMG9 183 aa5.28□□□□□ -1.56
PTPN4-210ENST00000485247 ANO6Q4KMQ2 910 aa5.28□□□□□ -1.56
PTPN4-210ENST00000485247 ATXN7L2Q5T6C5 722 aaPredicted RBP5.28□□□□□ -1.56
PTPN4-210ENST00000485247 LYPLAL1Q5VWZ2 237 aa5.28□□□□□ -1.56
PTPN4-210ENST00000485247 E4F1Q66K89 784 aaPredicted RBP5.28□□□□□ -1.56
PTPN4-210ENST00000485247 KRT39Q6A163 491 aa5.28□□□□□ -1.56
PTPN4-210ENST00000485247 FAM199XQ6PEV8 388 aaPredicted RBP5.28□□□□□ -1.56
PTPN4-210ENST00000485247 LEKR1Q6ZMV7 388 aa5.28□□□□□ -1.56
PTPN4-210ENST00000485247 UNC13DQ70J99 1090 aa5.28□□□□□ -1.56
PTPN4-210ENST00000485247 BEND5Q7L4P6 421 aa5.28□□□□□ -1.56
PTPN4-210ENST00000485247 MRGPRGQ86SM5 289 aa5.28□□□□□ -1.56
PTPN4-210ENST00000485247 SYVN1Q86TM6 617 aa5.28□□□□□ -1.56
PTPN4-210ENST00000485247 KCNMB4Q86W47 210 aa5.28□□□□□ -1.56
PTPN4-210ENST00000485247 FBXL13Q8NEE6 735 aa5.28□□□□□ -1.56
PTPN4-210ENST00000485247 OR2AP1Q8NGE2 309 aa5.28□□□□□ -1.56
PTPN4-210ENST00000485247 SREK1Q8WXA9 508 aaKnown RBP5.28□□□□□ -1.56
PTPN4-210ENST00000485247 INPP5DQ92835 1189 aa5.28□□□□□ -1.56
PTPN4-210ENST00000485247 DHX58Q96C10 678 aa5.28□□□□□ -1.56
PTPN4-210ENST00000485247 HMCESQ96FZ2 354 aa5.28□□□□□ -1.56
PTPN4-210ENST00000485247 FAXDC2Q96IV6 333 aa5.28□□□□□ -1.56
PTPN4-210ENST00000485247 OR6C1Q96RD1 312 aa5.28□□□□□ -1.56
PTPN4-210ENST00000485247 SMAD5Q99717 465 aaKnown RBP5.28□□□□□ -1.56
PTPN4-210ENST00000485247 C7orf25Q9BPX7 421 aa5.28□□□□□ -1.56
PTPN4-210ENST00000485247 SPATA25Q9BR10 227 aa5.28□□□□□ -1.56
PTPN4-210ENST00000485247 TRIM62Q9BVG3 475 aa5.28□□□□□ -1.56
PTPN4-210ENST00000485247 KRTAP9-3Q9BYQ3 159 aa5.28□□□□□ -1.56
PTPN4-210ENST00000485247 RAB20Q9NX57 234 aa5.28□□□□□ -1.56
PTPN4-210ENST00000485247 ARHGEF38Q9NXL2 777 aa5.28□□□□□ -1.56
PTPN4-210ENST00000485247 SIDT1Q9NXL6 827 aaKnown RBP5.28□□□□□ -1.56
PTPN4-210ENST00000485247 USP25Q9UHP3 1055 aa5.28□□□□□ -1.56
PTPN4-210ENST00000485247 KIAA1257Q9ULG3 409 aa5.28□□□□□ -1.56
PTPN4-210ENST00000485247 PCDHGB6Q9Y5F9 930 aa5.28□□□□□ -1.56
PTPN4-210ENST00000485247 DCHS2Q6V1P9 2916 aa5.27□□□□□ -1.57
PTPN4-210ENST00000485247 ANKRD36A6QL64 1941 aa5.27□□□□□ -1.57
PTPN4-210ENST00000485247 ILVBLA1L0T0 632 aa5.27□□□□□ -1.57
PTPN4-210ENST00000485247 RASA4BC9J798 803 aa5.27□□□□□ -1.57
PTPN4-210ENST00000485247 E2F3O00716 465 aa5.27□□□□□ -1.57
PTPN4-210ENST00000485247 RASA4O43374 803 aa5.27□□□□□ -1.57
PTPN4-210ENST00000485247 SPAG6O75602 509 aa5.27□□□□□ -1.57
PTPN4-210ENST00000485247 STSP08842 583 aa5.27□□□□□ -1.57
PTPN4-210ENST00000485247 KLK2P20151 261 aa5.27□□□□□ -1.57
PTPN4-210ENST00000485247 BCL6P41182 706 aa5.27□□□□□ -1.57
PTPN4-210ENST00000485247 ACTR1BP42025 376 aa5.27□□□□□ -1.57
PTPN4-210ENST00000485247 NDST2P52849 883 aa5.27□□□□□ -1.57
PTPN4-210ENST00000485247 ACTR1AP61163 376 aa5.27□□□□□ -1.57
PTPN4-210ENST00000485247 SNRPD1P62314 119 aaKnown RBP5.27□□□□□ -1.57
PTPN4-210ENST00000485247 RPS15P62841 145 aaKnown RBP5.27□□□□□ -1.57
PTPN4-210ENST00000485247 RPL11P62913 178 aaKnown RBP5.27□□□□□ -1.57
PTPN4-210ENST00000485247 CDK17Q00537 523 aa5.27□□□□□ -1.57
PTPN4-210ENST00000485247 TLE4Q04727 773 aa5.27□□□□□ -1.57
PTPN4-210ENST00000485247 LTBQ06643 244 aa5.27□□□□□ -1.57
PTPN4-210ENST00000485247 ELP6Q0PNE2 266 aa5.27□□□□□ -1.57
PTPN4-210ENST00000485247 STK4Q13043 487 aa5.27□□□□□ -1.57
PTPN4-210ENST00000485247 ADAM9Q13443 819 aa5.27□□□□□ -1.57
PTPN4-210ENST00000485247 NFATC2Q13469 925 aa5.27□□□□□ -1.57
PTPN4-210ENST00000485247 LLGL1Q15334 1064 aa5.27□□□□□ -1.57
PTPN4-210ENST00000485247 CNGA2Q16280 664 aa5.27□□□□□ -1.57
PTPN4-210ENST00000485247 ACBD5Q5T8D3 534 aaPredicted RBP5.27□□□□□ -1.57
PTPN4-210ENST00000485247 VWA5B1Q5TIE3 1220 aa5.27□□□□□ -1.57
PTPN4-210ENST00000485247 CNNM4Q6P4Q7 775 aa5.27□□□□□ -1.57
PTPN4-210ENST00000485247 TMEM270Q6UE05 265 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms