RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 OR2M5A3KFT3 312 aa3.77□□□□□ -1.81
SCAF11-207ENST00000484275 EIF3CLB5ME19 914 aaKnown RBP3.77□□□□□ -1.81
SCAF11-207ENST00000484275 PLK4O00444 970 aa3.77□□□□□ -1.81
SCAF11-207ENST00000484275 HMBSP08397 361 aa3.77□□□□□ -1.81
SCAF11-207ENST00000484275 CBLP22681 906 aa3.77□□□□□ -1.81
SCAF11-207ENST00000484275 PRCPP42785 496 aa3.77□□□□□ -1.81
SCAF11-207ENST00000484275 SLC6A12P48065 614 aa3.77□□□□□ -1.81
SCAF11-207ENST00000484275 HARS2P49590 506 aaKnown RBP3.77□□□□□ -1.81
SCAF11-207ENST00000484275 TUBP50607 506 aa3.77□□□□□ -1.81
SCAF11-207ENST00000484275 SNRPD1P62314 119 aaKnown RBP3.77□□□□□ -1.81
SCAF11-207ENST00000484275 SP3Q02447 781 aa3.77□□□□□ -1.81
SCAF11-207ENST00000484275 INO80CQ6PI98 192 aaPredicted RBP3.77□□□□□ -1.81
SCAF11-207ENST00000484275 ZNF611Q8N823 705 aa3.77□□□□□ -1.81
SCAF11-207ENST00000484275 PPP4R1Q8TF05 950 aa3.77□□□□□ -1.81
SCAF11-207ENST00000484275 SMPDL3BQ92485 455 aa3.77□□□□□ -1.81
SCAF11-207ENST00000484275 PKP2Q99959 881 aa3.77□□□□□ -1.81
SCAF11-207ENST00000484275 RANBP17Q9H2T7 1088 aaKnown RBP3.77□□□□□ -1.81
SCAF11-207ENST00000484275 RANGRFQ9HD47 186 aaPredicted RBP3.77□□□□□ -1.81
SCAF11-207ENST00000484275 DLGAP2Q9P1A6 1054 aa3.77□□□□□ -1.81
SCAF11-207ENST00000484275 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.76□□□□□ -1.81
SCAF11-207ENST00000484275 A0A087WW49 117 aa3.76□□□□□ -1.81
SCAF11-207ENST00000484275 KANSL1LA0AUZ9 987 aa3.76□□□□□ -1.81
SCAF11-207ENST00000484275 GPR137BO60478 399 aa3.76□□□□□ -1.81
SCAF11-207ENST00000484275 CSPG5O95196 566 aa3.76□□□□□ -1.81
SCAF11-207ENST00000484275 RAF1P04049 648 aa3.76□□□□□ -1.81
SCAF11-207ENST00000484275 CEACAM8P31997 349 aaPredicted RBP3.76□□□□□ -1.81
SCAF11-207ENST00000484275 NKX2-1P43699 371 aaPredicted RBP3.76□□□□□ -1.81
SCAF11-207ENST00000484275 SNX16P57768 344 aa3.76□□□□□ -1.81
SCAF11-207ENST00000484275 KCNJ10P78508 379 aa3.76□□□□□ -1.81
SCAF11-207ENST00000484275 TMEM115Q12893 351 aaPredicted RBP3.76□□□□□ -1.81
SCAF11-207ENST00000484275 ALS2CLQ60I27 953 aa3.76□□□□□ -1.81
SCAF11-207ENST00000484275 Q6ZSR9 355 aa3.76□□□□□ -1.81
SCAF11-207ENST00000484275 SEPT14Q6ZU15 432 aa3.76□□□□□ -1.81
SCAF11-207ENST00000484275 ZNRF4Q8WWF5 429 aa3.76□□□□□ -1.81
SCAF11-207ENST00000484275 GIMAP5Q96F15 307 aa3.76□□□□□ -1.81
SCAF11-207ENST00000484275 ZNF300Q96RE9 604 aaPredicted RBP3.76□□□□□ -1.81
SCAF11-207ENST00000484275 TRIM51Q9BSJ1 452 aa3.76□□□□□ -1.81
SCAF11-207ENST00000484275 LAT2Q9GZY6 243 aa3.76□□□□□ -1.81
SCAF11-207ENST00000484275 SEMA6AQ9H2E6 1030 aa3.76□□□□□ -1.81
SCAF11-207ENST00000484275 RRN3Q9NYV6 651 aa3.76□□□□□ -1.81
SCAF11-207ENST00000484275 COQ3Q9NZJ6 369 aa3.76□□□□□ -1.81
SCAF11-207ENST00000484275 ARHGEF40Q8TER5 1519 aa3.75□□□□□ -1.81
SCAF11-207ENST00000484275 RRN3P2A6NIE6 340 aa3.75□□□□□ -1.81
SCAF11-207ENST00000484275 C15orf62A8K5M9 175 aa3.75□□□□□ -1.81
SCAF11-207ENST00000484275 PI15O43692 258 aa3.75□□□□□ -1.81
SCAF11-207ENST00000484275 ZNF217O75362 1048 aa3.75□□□□□ -1.81
SCAF11-207ENST00000484275 CEBPBP17676 345 aa3.75□□□□□ -1.81
SCAF11-207ENST00000484275 MRPS34P82930 218 aaKnown RBP3.75□□□□□ -1.81
SCAF11-207ENST00000484275 MFAP5Q13361 173 aa3.75□□□□□ -1.81
SCAF11-207ENST00000484275 CTU2Q2VPK5 515 aaKnown RBP3.75□□□□□ -1.81
SCAF11-207ENST00000484275 SOWAHCQ53LP3 525 aaPredicted RBP3.75□□□□□ -1.81
SCAF11-207ENST00000484275 ARHGEF16Q5VV41 709 aa3.75□□□□□ -1.81
SCAF11-207ENST00000484275 CRYBG2Q8N1P7 616 aa3.75□□□□□ -1.81
SCAF11-207ENST00000484275 OLIG1Q8TAK6 271 aa3.75□□□□□ -1.81
SCAF11-207ENST00000484275 TMEM39BQ9GZU3 492 aa3.75□□□□□ -1.81
SCAF11-207ENST00000484275 CWC15Q9P013 229 aaKnown RBP3.75□□□□□ -1.81
SCAF11-207ENST00000484275 RCC2Q9P258 522 aaKnown RBP3.75□□□□□ -1.81
SCAF11-207ENST00000484275 FBXW11Q9UKB1 542 aa3.75□□□□□ -1.81
SCAF11-207ENST00000484275 RABGAP1Q9Y3P9 1069 aa3.75□□□□□ -1.81
SCAF11-207ENST00000484275 ZHX2Q9Y6X8 837 aa3.75□□□□□ -1.81
SCAF11-207ENST00000484275 A0A1W2PNU3 283 aaPredicted RBP3.74□□□□□ -1.81
SCAF11-207ENST00000484275 NPIPB15A6NHN6 443 aaPredicted RBP3.74□□□□□ -1.81
SCAF11-207ENST00000484275 PRR32B1ATL7 298 aa3.74□□□□□ -1.81
SCAF11-207ENST00000484275 SLCO1B7G3V0H7 640 aa3.74□□□□□ -1.81
SCAF11-207ENST00000484275 H3BQ06 376 aaPredicted RBP3.74□□□□□ -1.81
SCAF11-207ENST00000484275 ZNF197O14709 1029 aa3.74□□□□□ -1.81
SCAF11-207ENST00000484275 MAP2K7O14733 419 aa3.74□□□□□ -1.81
SCAF11-207ENST00000484275 AP2A2O94973 939 aa3.74□□□□□ -1.81
SCAF11-207ENST00000484275 SHC1P29353 583 aa3.74□□□□□ -1.81
SCAF11-207ENST00000484275 TAS2R40P59535 323 aa3.74□□□□□ -1.81
SCAF11-207ENST00000484275 OLR1P78380 273 aa3.74□□□□□ -1.81
SCAF11-207ENST00000484275 P2RY6Q15077 328 aa3.74□□□□□ -1.81
SCAF11-207ENST00000484275 DPCR1Q3MIW9 517 aa3.74□□□□□ -1.81
SCAF11-207ENST00000484275 CCDC190Q86UF4 302 aa3.74□□□□□ -1.81
SCAF11-207ENST00000484275 TMEM143Q96AN5 459 aa3.74□□□□□ -1.81
SCAF11-207ENST00000484275 INTS12Q96CB8 462 aaKnown RBP3.74□□□□□ -1.81
SCAF11-207ENST00000484275 PERPQ96FX8 193 aa3.74□□□□□ -1.81
SCAF11-207ENST00000484275 MAP7D2Q96T17 732 aa3.74□□□□□ -1.81
SCAF11-207ENST00000484275 AGXT2Q9BYV1 514 aa3.74□□□□□ -1.81
SCAF11-207ENST00000484275 PCNX3Q9H6A9 2034 aa3.74□□□□□ -1.81
SCAF11-207ENST00000484275 EPB41L5Q9HCM4 733 aa3.74□□□□□ -1.81
SCAF11-207ENST00000484275 ECHDC1Q9NTX5 307 aa3.74□□□□□ -1.81
SCAF11-207ENST00000484275 IGHV4-4A0A075B6R2 117 aa3.73□□□□□ -1.81
SCAF11-207ENST00000484275 IGHV4-61A0A0C4DH41 118 aa3.73□□□□□ -1.81
SCAF11-207ENST00000484275 CCDC196A0A1B0GTZ2 297 aa3.73□□□□□ -1.81
SCAF11-207ENST00000484275 OR6C76A6NM76 312 aa3.73□□□□□ -1.81
SCAF11-207ENST00000484275 TMEM189-UBE2V1I3L0A0 370 aa3.73□□□□□ -1.81
SCAF11-207ENST00000484275 J3QR06 171 aa3.73□□□□□ -1.81
SCAF11-207ENST00000484275 IFRD1O00458 451 aaPredicted RBP3.73□□□□□ -1.81
SCAF11-207ENST00000484275 IGHV4-59P01825 116 aa3.73□□□□□ -1.81
SCAF11-207ENST00000484275 CKMT2P17540 419 aa3.73□□□□□ -1.81
SCAF11-207ENST00000484275 PBX3P40426 434 aa3.73□□□□□ -1.81
SCAF11-207ENST00000484275 RARSP54136 660 aaKnown RBP3.73□□□□□ -1.81
SCAF11-207ENST00000484275 SLC8A3P57103 927 aa3.73□□□□□ -1.81
SCAF11-207ENST00000484275 CSTF3Q12996 717 aaKnown RBP3.73□□□□□ -1.81
SCAF11-207ENST00000484275 UBE2V1Q13404 147 aa3.73□□□□□ -1.81
SCAF11-207ENST00000484275 DOK6Q6PKX4 331 aa3.73□□□□□ -1.81
SCAF11-207ENST00000484275 DENND5BQ6ZUT9 1274 aa3.73□□□□□ -1.81
SCAF11-207ENST00000484275 ZNF534Q76KX8 674 aa3.73□□□□□ -1.81
SCAF11-207ENST00000484275 SLC16A9Q7RTY1 509 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms