RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 PPP2CAP67775 309 aa28.41■■■□□ 2.14
VEGFA-211ENST00000476772 SGCGQ13326 291 aa28.41■■■□□ 2.14
VEGFA-211ENST00000476772 IRF4Q15306 451 aa28.41■■■□□ 2.14
VEGFA-211ENST00000476772 TTLL9Q3SXZ7 439 aa28.41■■■□□ 2.14
VEGFA-211ENST00000476772 TMEM31Q5JXX7 168 aa28.41■■■□□ 2.14
VEGFA-211ENST00000476772 ADGRG6Q86SQ4 1221 aa28.41■■■□□ 2.14
VEGFA-211ENST00000476772 PGBD3Q8N328 593 aa28.41■■■□□ 2.14
VEGFA-211ENST00000476772 OR6Y1Q8NGX8 325 aa28.41■■■□□ 2.14
VEGFA-211ENST00000476772 SREK1Q8WXA9 508 aaKnown RBP28.41■■■□□ 2.14
VEGFA-211ENST00000476772 EXT2Q93063 718 aa28.41■■■□□ 2.14
VEGFA-211ENST00000476772 HIC2Q96JB3 615 aa28.41■■■□□ 2.14
VEGFA-211ENST00000476772 ATOH8Q96SQ7 321 aa28.41■■■□□ 2.14
VEGFA-211ENST00000476772 SLC17A9Q9BYT1 436 aa28.41■■■□□ 2.14
VEGFA-211ENST00000476772 ZNF395Q9H8N7 513 aaPredicted RBP28.41■■■□□ 2.14
VEGFA-211ENST00000476772 KLHL42Q9P2K6 505 aa28.41■■■□□ 2.14
VEGFA-211ENST00000476772 EBF1Q9UH73 591 aa28.41■■■□□ 2.14
VEGFA-211ENST00000476772 F8W8V4 182 aa28.4■■■□□ 2.14
VEGFA-211ENST00000476772 QSOX1O00391 747 aa28.4■■■□□ 2.14
VEGFA-211ENST00000476772 AOAHP28039 575 aa28.4■■■□□ 2.14
VEGFA-211ENST00000476772 MAT2AP31153 395 aaKnown RBP28.4■■■□□ 2.14
VEGFA-211ENST00000476772 ACSL1P33121 698 aa28.4■■■□□ 2.14
VEGFA-211ENST00000476772 SF3A3Q12874 501 aaKnown RBP eCLIP28.4■■■□□ 2.141e-11■■■■□ 26.6
VEGFA-211ENST00000476772 NEK5Q6P3R8 708 aa28.4■■■□□ 2.14
VEGFA-211ENST00000476772 HEATR4Q86WZ0 1026 aa28.4■■■□□ 2.14
VEGFA-211ENST00000476772 STAG3L4Q8TBR4 150 aa28.4■■■□□ 2.14
VEGFA-211ENST00000476772 COX14Q96I36 57 aa28.4■■■□□ 2.14
VEGFA-211ENST00000476772 ELAC2Q9BQ52 826 aaKnown RBP28.4■■■□□ 2.14
VEGFA-211ENST00000476772 ZCCHC2Q9C0B9 1178 aaKnown RBP28.4■■■□□ 2.14
VEGFA-211ENST00000476772 C20orf27Q9GZN8 174 aa28.4■■■□□ 2.14
VEGFA-211ENST00000476772 OR2AG1Q9H205 316 aa28.4■■■□□ 2.14
VEGFA-211ENST00000476772 A8MT66 165 aa28.39■■■□□ 2.14
VEGFA-211ENST00000476772 KERAO60938 352 aa28.39■■■□□ 2.14
VEGFA-211ENST00000476772 SNNO75324 88 aaPredicted RBP28.39■■■□□ 2.14
VEGFA-211ENST00000476772 CDK14O94921 469 aa28.39■■■□□ 2.14
VEGFA-211ENST00000476772 FTH1P02794 183 aa28.39■■■□□ 2.14
VEGFA-211ENST00000476772 PRLHRP49683 370 aa28.39■■■□□ 2.14
VEGFA-211ENST00000476772 MAP7D1Q3KQU3 841 aa28.39■■■□□ 2.14
VEGFA-211ENST00000476772 UBALD2Q8IYN6 164 aa28.39■■■□□ 2.14
VEGFA-211ENST00000476772 GATA5Q9BWX5 397 aaPredicted RBP28.39■■■□□ 2.14
VEGFA-211ENST00000476772 KDM4CQ9H3R0 1056 aa28.39■■■□□ 2.14
VEGFA-211ENST00000476772 TRIM39Q9HCM9 518 aa28.39■■■□□ 2.14
VEGFA-211ENST00000476772 ITM2CQ9NQX7 267 aa28.39■■■□□ 2.14
VEGFA-211ENST00000476772 RNF112Q9ULX5 631 aa28.39■■■□□ 2.14
VEGFA-211ENST00000476772 ATG13O75143 517 aa28.38■■■□□ 2.13
VEGFA-211ENST00000476772 GRK2P25098 689 aa28.38■■■□□ 2.13
VEGFA-211ENST00000476772 CDK3Q00526 305 aa28.38■■■□□ 2.13
VEGFA-211ENST00000476772 OCRLQ01968 901 aa28.38■■■□□ 2.13
VEGFA-211ENST00000476772 ANO7Q6IWH7 933 aa28.38■■■□□ 2.13
VEGFA-211ENST00000476772 TMEM220Q6QAJ8 160 aa28.38■■■□□ 2.13
VEGFA-211ENST00000476772 MYO1HQ8N1T3 1032 aa28.38■■■□□ 2.13
VEGFA-211ENST00000476772 NELL2Q99435 816 aa28.38■■■□□ 2.13
VEGFA-211ENST00000476772 BTBD1Q9H0C5 482 aa28.38■■■□□ 2.13
VEGFA-211ENST00000476772 TBC1D17Q9HA65 648 aa28.38■■■□□ 2.13
VEGFA-211ENST00000476772 CYP4F12Q9HCS2 524 aa28.38■■■□□ 2.13
VEGFA-211ENST00000476772 USP36Q9P275 1121 aaKnown RBP28.38■■■□□ 2.13
VEGFA-211ENST00000476772 ATXN10Q9UBB4 475 aa28.38■■■□□ 2.13
VEGFA-211ENST00000476772 UBXN8O00124 270 aa28.38■■■□□ 2.13
VEGFA-211ENST00000476772 RAD51BO15315 384 aa28.38■■■□□ 2.13
VEGFA-211ENST00000476772 ITM2AO43736 263 aa28.38■■■□□ 2.13
VEGFA-211ENST00000476772 LYPLA1O75608 230 aaPredicted RBP28.38■■■□□ 2.13
VEGFA-211ENST00000476772 PRKAA2P54646 552 aa28.38■■■□□ 2.13
VEGFA-211ENST00000476772 BOP1Q14137 746 aaKnown RBP28.38■■■□□ 2.13
VEGFA-211ENST00000476772 INPP5AQ14642 412 aa28.38■■■□□ 2.13
VEGFA-211ENST00000476772 ELMO1Q92556 727 aa28.38■■■□□ 2.13
VEGFA-211ENST00000476772 FUBP1Q96AE4 644 aaKnown RBP28.38■■■□□ 2.13
VEGFA-211ENST00000476772 MOCOSQ96EN8 888 aa28.38■■■□□ 2.13
VEGFA-211ENST00000476772 HHIPQ96QV1 700 aa28.38■■■□□ 2.13
VEGFA-211ENST00000476772 ACSS2Q9NR19 701 aa28.38■■■□□ 2.13
VEGFA-211ENST00000476772 THAP1Q9NVV9 213 aa28.38■■■□□ 2.13
VEGFA-211ENST00000476772 COL6A3P12111 3177 aa28.38■■■□□ 2.13
VEGFA-211ENST00000476772 H2AFYO75367 372 aaKnown RBP28.37■■■□□ 2.13
VEGFA-211ENST00000476772 CBSLP0DN79 551 aa28.37■■■□□ 2.13
VEGFA-211ENST00000476772 CBSP35520 551 aa28.37■■■□□ 2.13
VEGFA-211ENST00000476772 SLC1A6P48664 564 aa28.37■■■□□ 2.13
VEGFA-211ENST00000476772 OVGP1Q12889 678 aa28.37■■■□□ 2.13
VEGFA-211ENST00000476772 PIGWQ7Z7B1 504 aa28.37■■■□□ 2.13
VEGFA-211ENST00000476772 C7orf26Q96N11 449 aa28.37■■■□□ 2.13
VEGFA-211ENST00000476772 SMIM24O75264 130 aa28.36■■■□□ 2.13
VEGFA-211ENST00000476772 IPO13O94829 963 aaKnown RBP28.36■■■□□ 2.13
VEGFA-211ENST00000476772 MTHFD2P13995 350 aa28.36■■■□□ 2.13
VEGFA-211ENST00000476772 ARRB2P32121 409 aa28.36■■■□□ 2.13
VEGFA-211ENST00000476772 NAGLUP54802 743 aa28.36■■■□□ 2.13
VEGFA-211ENST00000476772 DNAJB13P59910 316 aa28.36■■■□□ 2.13
VEGFA-211ENST00000476772 HSPA14Q0VDF9 509 aa28.36■■■□□ 2.13
VEGFA-211ENST00000476772 GTF2H3Q13889 308 aa28.36■■■□□ 2.13
VEGFA-211ENST00000476772 GBX1Q14549 363 aa28.36■■■□□ 2.13
VEGFA-211ENST00000476772 BCL7AQ4VC05 210 aa28.36■■■□□ 2.13
VEGFA-211ENST00000476772 ATG14Q6ZNE5 492 aa28.36■■■□□ 2.13
VEGFA-211ENST00000476772 TSTD1Q8NFU3 115 aa28.36■■■□□ 2.13
VEGFA-211ENST00000476772 OR2T34Q8NGX1 318 aa28.36■■■□□ 2.13
VEGFA-211ENST00000476772 CCDC126Q96EE4 140 aa28.36■■■□□ 2.13
VEGFA-211ENST00000476772 PHF21BQ96EK2 531 aa28.36■■■□□ 2.13
VEGFA-211ENST00000476772 LGR4Q9BXB1 951 aa28.36■■■□□ 2.13
VEGFA-211ENST00000476772 C1QTNF7Q9BXJ2 289 aa28.36■■■□□ 2.13
VEGFA-211ENST00000476772 EPHX3Q9H6B9 360 aa28.36■■■□□ 2.13
VEGFA-211ENST00000476772 FZD3Q9NPG1 666 aa28.36■■■□□ 2.13
VEGFA-211ENST00000476772 NCKIPSDQ9NZQ3 722 aa28.36■■■□□ 2.13
VEGFA-211ENST00000476772 TMEM98Q9Y2Y6 226 aa28.36■■■□□ 2.13
VEGFA-211ENST00000476772 TMEM202A6NGA9 273 aa28.35■■■□□ 2.13
VEGFA-211ENST00000476772 SUPT3HB4E1H0 165 aa28.35■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms