RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 ELOAQ14241 798 aaKnown RBP12.33□□□□□ -0.44
SKA3-206ENST00000475251 GALNT3Q14435 633 aa12.33□□□□□ -0.44
SKA3-206ENST00000475251 KCNAB1Q14722 419 aa12.33□□□□□ -0.44
SKA3-206ENST00000475251 PDK2Q15119 407 aa12.33□□□□□ -0.44
SKA3-206ENST00000475251 ZRANB3Q5FWF4 1079 aa12.33□□□□□ -0.44
SKA3-206ENST00000475251 SLC6A19Q695T7 634 aa12.33□□□□□ -0.44
SKA3-206ENST00000475251 CCDC70Q6NSX1 233 aa12.33□□□□□ -0.44
SKA3-206ENST00000475251 ARMC6Q6NXE6 501 aa12.33□□□□□ -0.44
SKA3-206ENST00000475251 OOSP2Q86WS3 158 aa12.33□□□□□ -0.44
SKA3-206ENST00000475251 ZNF547Q8IVP9 402 aa12.33□□□□□ -0.44
SKA3-206ENST00000475251 IQCKQ8N0W5 287 aa12.33□□□□□ -0.44
SKA3-206ENST00000475251 D2HGDHQ8N465 521 aa12.33□□□□□ -0.44
SKA3-206ENST00000475251 CCNYQ8ND76 341 aa12.33□□□□□ -0.44
SKA3-206ENST00000475251 FDCSPQ8NFU4 85 aa12.33□□□□□ -0.44
SKA3-206ENST00000475251 GDAP1Q8TB36 358 aa12.33□□□□□ -0.44
SKA3-206ENST00000475251 ADAMTS17Q8TE56 1095 aa12.33□□□□□ -0.44
SKA3-206ENST00000475251 CPT1BQ92523 772 aa12.33□□□□□ -0.44
SKA3-206ENST00000475251 MAP3K3Q99759 626 aa12.33□□□□□ -0.44
SKA3-206ENST00000475251 NLNQ9BYT8 704 aa12.33□□□□□ -0.44
SKA3-206ENST00000475251 LATS2Q9NRM7 1088 aa12.33□□□□□ -0.44
SKA3-206ENST00000475251 C5AR2Q9P296 337 aa12.33□□□□□ -0.44
SKA3-206ENST00000475251 TRIM10Q9UDY6 481 aa12.33□□□□□ -0.44
SKA3-206ENST00000475251 ANAPC7Q9UJX3 599 aa12.33□□□□□ -0.44
SKA3-206ENST00000475251 SHOC2Q9UQ13 582 aa12.33□□□□□ -0.44
SKA3-206ENST00000475251 ZNF711Q9Y462 761 aa12.33□□□□□ -0.44
SKA3-206ENST00000475251 RP1L1Q8IWN7 2480 aaPredicted RBP12.33□□□□□ -0.44
SKA3-206ENST00000475251 OR5K3A6NET4 321 aa12.32□□□□□ -0.44
SKA3-206ENST00000475251 MYO1FO00160 1098 aa12.32□□□□□ -0.44
SKA3-206ENST00000475251 MTX2O75431 263 aa12.32□□□□□ -0.44
SKA3-206ENST00000475251 CLDN1O95832 211 aa12.32□□□□□ -0.44
SKA3-206ENST00000475251 SLC4A1P02730 911 aa12.32□□□□□ -0.44
SKA3-206ENST00000475251 MMP2P08253 660 aa12.32□□□□□ -0.44
SKA3-206ENST00000475251 CD48P09326 243 aa12.32□□□□□ -0.44
SKA3-206ENST00000475251 PPP1CAP62136 330 aa12.32□□□□□ -0.44
SKA3-206ENST00000475251 DMPKQ09013 629 aa12.32□□□□□ -0.44
SKA3-206ENST00000475251 TMEM115Q12893 351 aaPredicted RBP12.32□□□□□ -0.44
SKA3-206ENST00000475251 DPYSL3Q14195 570 aa12.32□□□□□ -0.44
SKA3-206ENST00000475251 PRR30Q53SZ7 412 aaPredicted RBP12.32□□□□□ -0.44
SKA3-206ENST00000475251 ZDHHC20Q5W0Z9 365 aa12.32□□□□□ -0.44
SKA3-206ENST00000475251 APTXQ7Z2E3 356 aaKnown RBP12.32□□□□□ -0.44
SKA3-206ENST00000475251 AMZ2Q86W34 360 aa12.32□□□□□ -0.44
SKA3-206ENST00000475251 SLC34A3Q8N130 599 aa12.32□□□□□ -0.44
SKA3-206ENST00000475251 ENDOVQ8N8Q3 282 aaKnown RBP12.32□□□□□ -0.44
SKA3-206ENST00000475251 Q8NA96 180 aa12.32□□□□□ -0.44
SKA3-206ENST00000475251 GLIS1Q8NBF1 620 aa12.32□□□□□ -0.44
SKA3-206ENST00000475251 TTC13Q8NBP0 860 aa12.32□□□□□ -0.44
SKA3-206ENST00000475251 KCTD6Q8NC69 237 aa12.32□□□□□ -0.44
SKA3-206ENST00000475251 EID2BQ96D98 161 aa12.32□□□□□ -0.44
SKA3-206ENST00000475251 SMAD5Q99717 465 aaKnown RBP12.32□□□□□ -0.44
SKA3-206ENST00000475251 NUDT9Q9BW91 350 aa12.32□□□□□ -0.44
SKA3-206ENST00000475251 AKIRIN1Q9H9L7 192 aaPredicted RBP12.32□□□□□ -0.44
SKA3-206ENST00000475251 HRASLS2Q9NWW9 162 aa12.32□□□□□ -0.44
SKA3-206ENST00000475251 CHMP5Q9NZZ3 219 aa12.32□□□□□ -0.44
SKA3-206ENST00000475251 LUZP4Q9P127 313 aa12.32□□□□□ -0.44
SKA3-206ENST00000475251 ERRFI1Q9UJM3 462 aaPredicted RBP12.32□□□□□ -0.44
SKA3-206ENST00000475251 TCFL5Q9UL49 500 aa12.32□□□□□ -0.44
SKA3-206ENST00000475251 WDR37Q9Y2I8 494 aa12.32□□□□□ -0.44
SKA3-206ENST00000475251 CACNA1DQ01668 2161 aa12.31□□□□□ -0.44
SKA3-206ENST00000475251 MEN1O00255 615 aa12.31□□□□□ -0.44
SKA3-206ENST00000475251 ZNF185O15231 689 aa12.31□□□□□ -0.44
SKA3-206ENST00000475251 MAP3K7O43318 606 aa12.31□□□□□ -0.44
SKA3-206ENST00000475251 ALPPP05187 535 aa12.31□□□□□ -0.44
SKA3-206ENST00000475251 BPIP17213 487 aa12.31□□□□□ -0.44
SKA3-206ENST00000475251 COL8A1P27658 744 aa12.31□□□□□ -0.44
SKA3-206ENST00000475251 ARSEP51690 589 aa12.31□□□□□ -0.44
SKA3-206ENST00000475251 IFI35P80217 286 aaPredicted RBP12.31□□□□□ -0.44
SKA3-206ENST00000475251 PPIDQ08752 370 aaKnown RBP12.31□□□□□ -0.44
SKA3-206ENST00000475251 GPS2Q13227 327 aa12.31□□□□□ -0.44
SKA3-206ENST00000475251 NR6A1Q15406 480 aa12.31□□□□□ -0.44
SKA3-206ENST00000475251 SLC14A2Q15849 920 aa12.31□□□□□ -0.44
SKA3-206ENST00000475251 STX1AQ16623 288 aa12.31□□□□□ -0.44
SKA3-206ENST00000475251 FILIP1LQ4L180 1135 aa12.31□□□□□ -0.44
SKA3-206ENST00000475251 VWA5B1Q5TIE3 1220 aa12.31□□□□□ -0.44
SKA3-206ENST00000475251 RBM43Q6ZSC3 357 aaKnown RBP12.31□□□□□ -0.44
SKA3-206ENST00000475251 C11orf96Q7Z7L8 435 aa12.31□□□□□ -0.44
SKA3-206ENST00000475251 NT5DC3Q86UY8 548 aa12.31□□□□□ -0.44
SKA3-206ENST00000475251 RAB43Q86YS6 212 aa12.31□□□□□ -0.44
SKA3-206ENST00000475251 DSELQ8IZU8 1212 aa12.31□□□□□ -0.44
SKA3-206ENST00000475251 BEND7Q8N7W2 519 aaPredicted RBP12.31□□□□□ -0.44
SKA3-206ENST00000475251 RBMXL3Q8N7X1 1067 aaKnown RBP12.31□□□□□ -0.44
SKA3-206ENST00000475251 ZFPM2Q8WW38 1151 aa12.31□□□□□ -0.44
SKA3-206ENST00000475251 TM9SF4Q92544 642 aa12.31□□□□□ -0.44
SKA3-206ENST00000475251 ZNF501Q96CX3 271 aaPredicted RBP12.31□□□□□ -0.44
SKA3-206ENST00000475251 CLIP3Q96DZ5 547 aa12.31□□□□□ -0.44
SKA3-206ENST00000475251 SGSM3Q96HU1 749 aa12.31□□□□□ -0.44
SKA3-206ENST00000475251 CHST8Q9H2A9 424 aa12.31□□□□□ -0.44
SKA3-206ENST00000475251 CBX8Q9HC52 389 aa12.31□□□□□ -0.44
SKA3-206ENST00000475251 SYTL2Q9HCH5 934 aa12.31□□□□□ -0.44
SKA3-206ENST00000475251 IGSF5Q9NSI5 407 aa12.31□□□□□ -0.44
SKA3-206ENST00000475251 SOHLH2Q9NX45 425 aa12.31□□□□□ -0.44
SKA3-206ENST00000475251 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.31□□□□□ -0.44
SKA3-206ENST00000475251 DTLQ9NZJ0 730 aa12.31□□□□□ -0.44
SKA3-206ENST00000475251 PADI2Q9Y2J8 665 aa12.31□□□□□ -0.44
SKA3-206ENST00000475251 DNMT3AQ9Y6K1 912 aaPredicted RBP12.31□□□□□ -0.44
SKA3-206ENST00000475251 A6NL46 340 aa12.3□□□□□ -0.44
SKA3-206ENST00000475251 KCNK1O00180 336 aa12.3□□□□□ -0.44
SKA3-206ENST00000475251 CBX6O95503 412 aa12.3□□□□□ -0.44
SKA3-206ENST00000475251 IGHEP01854 428 aa12.3□□□□□ -0.44
SKA3-206ENST00000475251 TNFRSF8P28908 595 aa12.3□□□□□ -0.44
SKA3-206ENST00000475251 ITGA1P56199 1179 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms