RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 TMEM198Q66K66 360 aa3.73□□□□□ -1.81
BRCA2-202ENST00000470094 KIAA0930Q6ICG6 404 aaPredicted RBP3.73□□□□□ -1.81
BRCA2-202ENST00000470094 PACS1Q6VY07 963 aa3.73□□□□□ -1.81
BRCA2-202ENST00000470094 TPRG1Q6ZUI0 275 aa3.73□□□□□ -1.81
BRCA2-202ENST00000470094 CHST9Q7L1S5 443 aa3.73□□□□□ -1.81
BRCA2-202ENST00000470094 PIWIL4Q7Z3Z4 852 aaKnown RBP3.73□□□□□ -1.81
BRCA2-202ENST00000470094 LONP2Q86WA8 852 aa3.73□□□□□ -1.81
BRCA2-202ENST00000470094 TTC39CQ8N584 583 aa3.73□□□□□ -1.81
BRCA2-202ENST00000470094 GBGT1Q8N5D6 347 aa3.73□□□□□ -1.81
BRCA2-202ENST00000470094 C1orf131Q8NDD1 294 aaKnown RBP3.73□□□□□ -1.81
BRCA2-202ENST00000470094 GRAPLQ8TC17 118 aaPredicted RBP3.73□□□□□ -1.81
BRCA2-202ENST00000470094 STAMBPL1Q96FJ0 436 aa3.73□□□□□ -1.81
BRCA2-202ENST00000470094 SDF4Q9BRK5 362 aa3.73□□□□□ -1.81
BRCA2-202ENST00000470094 CENPOQ9BU64 300 aa3.73□□□□□ -1.81
BRCA2-202ENST00000470094 RAD21L1Q9H4I0 556 aa3.73□□□□□ -1.81
BRCA2-202ENST00000470094 TFB2MQ9H5Q4 396 aaKnown RBP3.73□□□□□ -1.81
BRCA2-202ENST00000470094 RCC2Q9P258 522 aaKnown RBP3.73□□□□□ -1.81
BRCA2-202ENST00000470094 FBXL17Q9UF56 701 aa3.73□□□□□ -1.81
BRCA2-202ENST00000470094 B3GALT5Q9Y2C3 310 aa3.73□□□□□ -1.81
BRCA2-202ENST00000470094 A0A0G2JNG1 304 aa3.72□□□□□ -1.81
BRCA2-202ENST00000470094 TMEM8BA6NDV4 472 aa3.72□□□□□ -1.81
BRCA2-202ENST00000470094 ERVV-2B6SEH9 535 aa3.72□□□□□ -1.81
BRCA2-202ENST00000470094 TMEM189-UBE2V1I3L0A0 370 aa3.72□□□□□ -1.81
BRCA2-202ENST00000470094 AP3D1O14617 1153 aa3.72□□□□□ -1.81
BRCA2-202ENST00000470094 AHCYL1O43865 530 aa3.72□□□□□ -1.81
BRCA2-202ENST00000470094 PRKNO60260 465 aaPredicted RBP3.72□□□□□ -1.81
BRCA2-202ENST00000470094 PTP4A3O75365 173 aa3.72□□□□□ -1.81
BRCA2-202ENST00000470094 TPPPO94811 219 aa3.72□□□□□ -1.81
BRCA2-202ENST00000470094 OR2C1O95371 312 aa3.72□□□□□ -1.81
BRCA2-202ENST00000470094 BMP10O95393 424 aa3.72□□□□□ -1.81
BRCA2-202ENST00000470094 BAG4O95429 457 aaKnown RBP3.72□□□□□ -1.81
BRCA2-202ENST00000470094 KRT19P08727 400 aa3.72□□□□□ -1.81
BRCA2-202ENST00000470094 GABRB1P18505 474 aa3.72□□□□□ -1.81
BRCA2-202ENST00000470094 PON1P27169 355 aa3.72□□□□□ -1.81
BRCA2-202ENST00000470094 TM4SF1P30408 202 aa3.72□□□□□ -1.81
BRCA2-202ENST00000470094 MAPK4P31152 587 aa3.72□□□□□ -1.81
BRCA2-202ENST00000470094 HOXD13P35453 343 aa3.72□□□□□ -1.81
BRCA2-202ENST00000470094 TIMP3P35625 211 aa3.72□□□□□ -1.81
BRCA2-202ENST00000470094 CDKN1AP38936 164 aa3.72□□□□□ -1.81
BRCA2-202ENST00000470094 RAD52P43351 418 aa3.72□□□□□ -1.81
BRCA2-202ENST00000470094 CD81P60033 236 aa3.72□□□□□ -1.81
BRCA2-202ENST00000470094 UBE2V1Q13404 147 aa3.72□□□□□ -1.81
BRCA2-202ENST00000470094 KIR2DS5Q14953 304 aa3.72□□□□□ -1.81
BRCA2-202ENST00000470094 RAB6CQ53S08 254 aa3.72□□□□□ -1.81
BRCA2-202ENST00000470094 RARS2Q5T160 578 aaKnown RBP3.72□□□□□ -1.81
BRCA2-202ENST00000470094 PLXDC2Q6UX71 529 aa3.72□□□□□ -1.81
BRCA2-202ENST00000470094 ARID3BQ8IVW6 561 aaPredicted RBP3.72□□□□□ -1.81
BRCA2-202ENST00000470094 OR8H2Q8N162 312 aa3.72□□□□□ -1.81
BRCA2-202ENST00000470094 CNBD1Q8NA66 436 aa3.72□□□□□ -1.81
BRCA2-202ENST00000470094 RBM15BQ8NDT2 890 aaKnown RBP3.72□□□□□ -1.81
BRCA2-202ENST00000470094 DUX3Q96PT4 197 aa3.72□□□□□ -1.81
BRCA2-202ENST00000470094 RAB6CQ9H0N0 254 aa3.72□□□□□ -1.81
BRCA2-202ENST00000470094 SMARCAD1Q9H4L7 1026 aa3.72□□□□□ -1.81
BRCA2-202ENST00000470094 TRMT1Q9NXH9 659 aaKnown RBP3.72□□□□□ -1.81
BRCA2-202ENST00000470094 TBC1D29Q9UFV1 150 aa3.72□□□□□ -1.81
BRCA2-202ENST00000470094 ERRFI1Q9UJM3 462 aaPredicted RBP3.72□□□□□ -1.81
BRCA2-202ENST00000470094 VPS28Q9UK41 221 aa3.72□□□□□ -1.81
BRCA2-202ENST00000470094 NENFQ9UMX5 172 aa3.72□□□□□ -1.81
BRCA2-202ENST00000470094 TTLL3Q9Y4R7 772 aa3.72□□□□□ -1.81
BRCA2-202ENST00000470094 YIPF1Q9Y548 306 aa3.72□□□□□ -1.81
BRCA2-202ENST00000470094 A0A1W2PPI3 338 aa3.71□□□□□ -1.82
BRCA2-202ENST00000470094 C5orf60A6NFR6 353 aa3.71□□□□□ -1.82
BRCA2-202ENST00000470094 H0YIN7 160 aa3.71□□□□□ -1.82
BRCA2-202ENST00000470094 J3QR06 171 aa3.71□□□□□ -1.82
BRCA2-202ENST00000470094 WISP2O76076 250 aa3.71□□□□□ -1.82
BRCA2-202ENST00000470094 CAVIN2O95810 425 aa3.71□□□□□ -1.82
BRCA2-202ENST00000470094 TFAP2AP05549 437 aa3.71□□□□□ -1.82
BRCA2-202ENST00000470094 NR1D1P20393 614 aa3.71□□□□□ -1.82
BRCA2-202ENST00000470094 MBTD1Q05BQ5 628 aa3.71□□□□□ -1.82
BRCA2-202ENST00000470094 RBM39Q14498 530 aaKnown RBP3.71□□□□□ -1.82
BRCA2-202ENST00000470094 KIR2DS3Q14952 304 aa3.71□□□□□ -1.82
BRCA2-202ENST00000470094 DUOXA1Q1HG43 343 aa3.71□□□□□ -1.82
BRCA2-202ENST00000470094 NDUFAF5Q5TEU4 345 aa3.71□□□□□ -1.82
BRCA2-202ENST00000470094 SLC35E4Q6ICL7 350 aa3.71□□□□□ -1.82
BRCA2-202ENST00000470094 ZNF449Q6P9G9 518 aa3.71□□□□□ -1.82
BRCA2-202ENST00000470094 SLC27A1Q6PCB7 646 aa3.71□□□□□ -1.82
BRCA2-202ENST00000470094 CEACAM20Q6UY09 585 aa3.71□□□□□ -1.82
BRCA2-202ENST00000470094 ZNF534Q76KX8 674 aa3.71□□□□□ -1.82
BRCA2-202ENST00000470094 GALNT5Q7Z7M9 940 aa3.71□□□□□ -1.82
BRCA2-202ENST00000470094 FOXP4Q8IVH2 680 aaPredicted RBP3.71□□□□□ -1.82
BRCA2-202ENST00000470094 CEP97Q8IW35 865 aa3.71□□□□□ -1.82
BRCA2-202ENST00000470094 ADGRF2Q8IZF7 708 aa3.71□□□□□ -1.82
BRCA2-202ENST00000470094 KLHDC9Q8NEP7 349 aa3.71□□□□□ -1.82
BRCA2-202ENST00000470094 OR10V1Q8NGI7 309 aa3.71□□□□□ -1.82
BRCA2-202ENST00000470094 TM9SF4Q92544 642 aa3.71□□□□□ -1.82
BRCA2-202ENST00000470094 GFI1Q99684 422 aa3.71□□□□□ -1.82
BRCA2-202ENST00000470094 SEMA6AQ9H2E6 1030 aa3.71□□□□□ -1.82
BRCA2-202ENST00000470094 CCDC68Q9H2F9 335 aa3.71□□□□□ -1.82
BRCA2-202ENST00000470094 GHITMQ9H3K2 345 aa3.71□□□□□ -1.82
BRCA2-202ENST00000470094 DNAJC18Q9H819 358 aa3.71□□□□□ -1.82
BRCA2-202ENST00000470094 BCCIPQ9P287 314 aaKnown RBP eCLIP3.71□□□□□ -1.82
BRCA2-202ENST00000470094 TSPYL4Q9UJ04 414 aa3.71□□□□□ -1.82
BRCA2-202ENST00000470094 JRKLQ9Y4A0 524 aa3.71□□□□□ -1.82
BRCA2-202ENST00000470094 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.71□□□□□ -1.82
BRCA2-202ENST00000470094 SMCHD1A6NHR9 2005 aa3.71□□□□□ -1.82
BRCA2-202ENST00000470094 PMS2P5A8MQ11 134 aa3.7□□□□□ -1.82
BRCA2-202ENST00000470094 CDRT15L2A8MXV6 281 aa3.7□□□□□ -1.82
BRCA2-202ENST00000470094 PTGES3LE9PB15 166 aa3.7□□□□□ -1.82
BRCA2-202ENST00000470094 GH2P01242 217 aa3.7□□□□□ -1.82
BRCA2-202ENST00000470094 LIPFP07098 398 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms