RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 FOXO6A8MYZ6 492 aa6.77□□□□□ -1.33
SCAF4-204ENST00000467731 HRO43593 1189 aa6.77□□□□□ -1.33
SCAF4-204ENST00000467731 SP9P0CG40 484 aa6.77□□□□□ -1.33
SCAF4-204ENST00000467731 MSH3P20585 1137 aa6.77□□□□□ -1.33
SCAF4-204ENST00000467731 SAT1P21673 171 aa6.77□□□□□ -1.33
SCAF4-204ENST00000467731 CD27P26842 260 aa6.77□□□□□ -1.33
SCAF4-204ENST00000467731 TEAD1P28347 426 aa6.77□□□□□ -1.33
SCAF4-204ENST00000467731 PGGT1BP53609 377 aa6.77□□□□□ -1.33
SCAF4-204ENST00000467731 ADARP55265 1226 aaKnown RBP6.77□□□□□ -1.33
SCAF4-204ENST00000467731 PDE1CQ14123 709 aaPredicted RBP6.77□□□□□ -1.33
SCAF4-204ENST00000467731 ZNF528Q3MIS6 628 aa6.77□□□□□ -1.33
SCAF4-204ENST00000467731 CTSL3PQ5NE16 218 aa6.77□□□□□ -1.33
SCAF4-204ENST00000467731 ZNF549Q6P9A3 640 aa6.77□□□□□ -1.33
SCAF4-204ENST00000467731 DOK6Q6PKX4 331 aa6.77□□□□□ -1.33
SCAF4-204ENST00000467731 PEX5LQ8IYB4 626 aa6.77□□□□□ -1.33
SCAF4-204ENST00000467731 RGL4Q8IZJ4 473 aa6.77□□□□□ -1.33
SCAF4-204ENST00000467731 CYP4X1Q8N118 509 aa6.77□□□□□ -1.33
SCAF4-204ENST00000467731 GBP7Q8N8V2 638 aaPredicted RBP6.77□□□□□ -1.33
SCAF4-204ENST00000467731 NELL1Q92832 810 aa6.77□□□□□ -1.33
SCAF4-204ENST00000467731 FAM136AQ96C01 138 aa6.77□□□□□ -1.33
SCAF4-204ENST00000467731 SGF29Q96ES7 293 aa6.77□□□□□ -1.33
SCAF4-204ENST00000467731 DCUN1D1Q96GG9 259 aa6.77□□□□□ -1.33
SCAF4-204ENST00000467731 SLC6A18Q96N87 628 aa6.77□□□□□ -1.33
SCAF4-204ENST00000467731 APOOQ9BUR5 198 aa6.77□□□□□ -1.33
SCAF4-204ENST00000467731 CLPBQ9H078 707 aa6.77□□□□□ -1.33
SCAF4-204ENST00000467731 MIR1-1HGQ9H1L0 117 aa6.77□□□□□ -1.33
SCAF4-204ENST00000467731 OR2AG1Q9H205 316 aa6.77□□□□□ -1.33
SCAF4-204ENST00000467731 P2RY12Q9H244 342 aa6.77□□□□□ -1.33
SCAF4-204ENST00000467731 PHPT1Q9NRX4 125 aaPredicted RBP6.77□□□□□ -1.33
SCAF4-204ENST00000467731 ARHGEF17Q96PE2 2063 aaPredicted RBP6.77□□□□□ -1.33
SCAF4-204ENST00000467731 FAM95CA0A1B0GW59 222 aa6.77□□□□□ -1.33
SCAF4-204ENST00000467731 IQCF5A8MTL0 148 aa6.77□□□□□ -1.33
SCAF4-204ENST00000467731 CFAP99D6REC4 459 aa6.77□□□□□ -1.33
SCAF4-204ENST00000467731 KRT37O76014 449 aa6.77□□□□□ -1.33
SCAF4-204ENST00000467731 CDK14O94921 469 aa6.77□□□□□ -1.33
SCAF4-204ENST00000467731 ASMTLO95671 621 aa6.77□□□□□ -1.33
SCAF4-204ENST00000467731 MYZAPP0CAP1 466 aa6.77□□□□□ -1.33
SCAF4-204ENST00000467731 RALBP11234 206 aa6.77□□□□□ -1.33
SCAF4-204ENST00000467731 ATP1B2P14415 290 aaPredicted RBP6.77□□□□□ -1.33
SCAF4-204ENST00000467731 NUDT1P36639 197 aa6.77□□□□□ -1.33
SCAF4-204ENST00000467731 SERPINB9P50453 376 aa6.77□□□□□ -1.33
SCAF4-204ENST00000467731 INHBCP55103 352 aa6.77□□□□□ -1.33
SCAF4-204ENST00000467731 PFN3P60673 137 aa6.77□□□□□ -1.33
SCAF4-204ENST00000467731 RASA2Q15283 850 aa6.77□□□□□ -1.33
SCAF4-204ENST00000467731 PMS2CLQ68D20 193 aa6.77□□□□□ -1.33
SCAF4-204ENST00000467731 LPCAT2Q7L5N7 544 aa6.77□□□□□ -1.33
SCAF4-204ENST00000467731 ADGRG6Q86SQ4 1221 aa6.77□□□□□ -1.33
SCAF4-204ENST00000467731 MYO1HQ8N1T3 1032 aa6.77□□□□□ -1.33
SCAF4-204ENST00000467731 RIBC1Q8N443 379 aaPredicted RBP6.77□□□□□ -1.33
SCAF4-204ENST00000467731 DCLK2Q8N568 766 aa6.77□□□□□ -1.33
SCAF4-204ENST00000467731 BEND7Q8N7W2 519 aaPredicted RBP6.77□□□□□ -1.33
SCAF4-204ENST00000467731 ZBTB44Q8NCP5 570 aa6.77□□□□□ -1.33
SCAF4-204ENST00000467731 GPR22Q99680 433 aa6.77□□□□□ -1.33
SCAF4-204ENST00000467731 CCDC68Q9H2F9 335 aa6.77□□□□□ -1.33
SCAF4-204ENST00000467731 CAB39LQ9H9S4 337 aa6.77□□□□□ -1.33
SCAF4-204ENST00000467731 TRIM39Q9HCM9 518 aa6.77□□□□□ -1.33
SCAF4-204ENST00000467731 ZSCAN32Q9NX65 697 aa6.77□□□□□ -1.33
SCAF4-204ENST00000467731 MKS1Q9NXB0 559 aa6.77□□□□□ -1.33
SCAF4-204ENST00000467731 ATXN10Q9UBB4 475 aa6.77□□□□□ -1.33
SCAF4-204ENST00000467731 ITGB1BP2Q9UKP3 347 aa6.77□□□□□ -1.33
SCAF4-204ENST00000467731 MED16Q9Y2X0 877 aa6.77□□□□□ -1.33
SCAF4-204ENST00000467731 HS3ST3A1Q9Y663 406 aa6.77□□□□□ -1.33
SCAF4-204ENST00000467731 GPR179Q6PRD1 2367 aa6.76□□□□□ -1.33
SCAF4-204ENST00000467731 IQANK1A0A1B0GTG1 560 aa6.76□□□□□ -1.33
SCAF4-204ENST00000467731 TMEM202A6NGA9 273 aa6.76□□□□□ -1.33
SCAF4-204ENST00000467731 A6NNZ2 444 aa6.76□□□□□ -1.33
SCAF4-204ENST00000467731 TRIM49D1C9J1S8 452 aa6.76□□□□□ -1.33
SCAF4-204ENST00000467731 CACNB4O00305 520 aaPredicted RBP6.76□□□□□ -1.33
SCAF4-204ENST00000467731 LIN7AO14910 233 aaPredicted RBP6.76□□□□□ -1.33
SCAF4-204ENST00000467731 RGS16O15492 202 aaPredicted RBP6.76□□□□□ -1.33
SCAF4-204ENST00000467731 SGTAO43765 313 aa6.76□□□□□ -1.33
SCAF4-204ENST00000467731 NIPSNAP2O75323 286 aa6.76□□□□□ -1.33
SCAF4-204ENST00000467731 SMNDC1O75940 238 aaKnown RBP eCLIP6.76□□□□□ -1.33
SCAF4-204ENST00000467731 ESR1P03372 595 aa6.76□□□□□ -1.33
SCAF4-204ENST00000467731 ALDOAP04075 364 aaKnown RBP6.76□□□□□ -1.33
SCAF4-204ENST00000467731 SNRPAP09012 282 aaKnown RBP6.76□□□□□ -1.33
SCAF4-204ENST00000467731 PKMP14618 531 aaKnown RBP6.76□□□□□ -1.33
SCAF4-204ENST00000467731 ZNF8P17098 575 aaPredicted RBP6.76□□□□□ -1.33
SCAF4-204ENST00000467731 RPS3P23396 243 aaKnown RBP eCLIP6.76□□□□□ -1.33
SCAF4-204ENST00000467731 ITPKAP23677 461 aa6.76□□□□□ -1.33
SCAF4-204ENST00000467731 CNTFP26441 200 aa6.76□□□□□ -1.33
SCAF4-204ENST00000467731 POLD2P49005 469 aa6.76□□□□□ -1.33
SCAF4-204ENST00000467731 CTSCP53634 463 aa6.76□□□□□ -1.33
SCAF4-204ENST00000467731 SNCBQ16143 134 aa6.76□□□□□ -1.33
SCAF4-204ENST00000467731 PLK5Q496M5 336 aa6.76□□□□□ -1.33
SCAF4-204ENST00000467731 TPRG1LQ5T0D9 272 aa6.76□□□□□ -1.33
SCAF4-204ENST00000467731 HECTD2Q5U5R9 776 aa6.76□□□□□ -1.33
SCAF4-204ENST00000467731 KCTD16Q68DU8 428 aa6.76□□□□□ -1.33
SCAF4-204ENST00000467731 LAYNQ6UX15 382 aa6.76□□□□□ -1.33
SCAF4-204ENST00000467731 KYAT3Q6YP21 454 aaKnown RBP6.76□□□□□ -1.33
SCAF4-204ENST00000467731 Q6ZSR6 202 aa6.76□□□□□ -1.33
SCAF4-204ENST00000467731 TAOK1Q7L7X3 1001 aa6.76□□□□□ -1.33
SCAF4-204ENST00000467731 ABI3BPQ7Z7G0 1075 aa6.76□□□□□ -1.33
SCAF4-204ENST00000467731 CMC1Q7Z7K0 106 aa6.76□□□□□ -1.33
SCAF4-204ENST00000467731 SPNS2Q8IVW8 549 aa6.76□□□□□ -1.33
SCAF4-204ENST00000467731 SLC22A18ASQ8N1D0 253 aa6.76□□□□□ -1.33
SCAF4-204ENST00000467731 RASGEF1AQ8N9B8 481 aa6.76□□□□□ -1.33
SCAF4-204ENST00000467731 OR13H1Q8NG92 308 aa6.76□□□□□ -1.33
SCAF4-204ENST00000467731 MZB1Q8WU39 189 aa6.76□□□□□ -1.33
SCAF4-204ENST00000467731 DNASE2BQ8WZ79 361 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms