RNA–Protein interactions for RNA: ENST00000461522.1

UBA3-204, Transcript of ubiquitin like modifier activating enzyme 3, human

TSL 2

Gene UBA3, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA3-204	ENST00000461522	GCKR	Q14397	625 aa		4.08	□□□□□ -1.76
UBA3-204	ENST00000461522	TOMM20	Q15388	145 aa		4.08	□□□□□ -1.76
UBA3-204	ENST00000461522	NFIL3	Q16649	462 aa		4.08	□□□□□ -1.76
UBA3-204	ENST00000461522	CRY2	Q49AN0	593 aa		4.08	□□□□□ -1.76
UBA3-204	ENST00000461522	HYI	Q5T013	277 aa		4.08	□□□□□ -1.76
UBA3-204	ENST00000461522	ARMC3	Q5W041	872 aa		4.08	□□□□□ -1.76
UBA3-204	ENST00000461522	PLEKHA7	Q6IQ23	1121 aa		4.08	□□□□□ -1.76
UBA3-204	ENST00000461522	KCTD18	Q6PI47	426 aa	Predicted RBP	4.08	□□□□□ -1.76
UBA3-204	ENST00000461522	LCTL	Q6UWM7	567 aa		4.08	□□□□□ -1.76
UBA3-204	ENST00000461522	CCDC73	Q6ZRK6	1079 aa		4.08	□□□□□ -1.76
UBA3-204	ENST00000461522	G2E3	Q7L622	706 aa		4.08	□□□□□ -1.76
UBA3-204	ENST00000461522	SBF2	Q86WG5	1849 aa		4.08	□□□□□ -1.76
UBA3-204	ENST00000461522	ZNF354C	Q86Y25	554 aa		4.08	□□□□□ -1.76
UBA3-204	ENST00000461522	EPHX4	Q8IUS5	362 aa		4.08	□□□□□ -1.76
UBA3-204	ENST00000461522	METTL27	Q8N6F8	245 aa	Predicted RBP	4.08	□□□□□ -1.76
UBA3-204	ENST00000461522	ANKRD42	Q8N9B4	389 aa		4.08	□□□□□ -1.76
UBA3-204	ENST00000461522	OR2AK2	Q8NG84	335 aa		4.08	□□□□□ -1.76
UBA3-204	ENST00000461522	SKA1	Q96BD8	255 aa		4.08	□□□□□ -1.76
UBA3-204	ENST00000461522	CCDC34	Q96HJ3	373 aa		4.08	□□□□□ -1.76
UBA3-204	ENST00000461522	ZSCAN31	Q96LW9	406 aa	Predicted RBP	4.08	□□□□□ -1.76
UBA3-204	ENST00000461522	SH3GL2	Q99962	352 aa		4.08	□□□□□ -1.76
UBA3-204	ENST00000461522	UTP14A	Q9BVJ6	771 aa	Known RBP	4.08	□□□□□ -1.76
UBA3-204	ENST00000461522	CDHR2	Q9BYE9	1310 aa		4.08	□□□□□ -1.76
UBA3-204	ENST00000461522	PLEKHA4	Q9H4M7	779 aa		4.08	□□□□□ -1.76
UBA3-204	ENST00000461522	TMEM160	Q9NX00	188 aa		4.08	□□□□□ -1.76
UBA3-204	ENST00000461522	TAAR2	Q9P1P5	351 aa		4.08	□□□□□ -1.76
UBA3-204	ENST00000461522	SLC25A10	Q9UBX3	287 aa	Predicted RBP	4.08	□□□□□ -1.76
UBA3-204	ENST00000461522	PADI1	Q9ULC6	663 aa		4.08	□□□□□ -1.76
UBA3-204	ENST00000461522	TMCC3	Q9ULS5	477 aa		4.08	□□□□□ -1.76
UBA3-204	ENST00000461522	TOGARAM1	Q9Y4F4	1720 aa		4.08	□□□□□ -1.76
UBA3-204	ENST00000461522	BTAF1	O14981	1849 aa		4.07	□□□□□ -1.76
UBA3-204	ENST00000461522	UBR2	Q8IWV8	1755 aa		4.07	□□□□□ -1.76
UBA3-204	ENST00000461522	LY75	O60449	1722 aa		4.07	□□□□□ -1.76
UBA3-204	ENST00000461522	RIC1	Q4ADV7	1423 aa		4.07	□□□□□ -1.76
UBA3-204	ENST00000461522	ADCY9	O60503	1353 aa		4.07	□□□□□ -1.76
UBA3-204	ENST00000461522	CARMIL3	Q8ND23	1372 aa		4.07	□□□□□ -1.76
UBA3-204	ENST00000461522	SH3TC1	Q8TE82	1336 aa		4.07	□□□□□ -1.76
UBA3-204	ENST00000461522	TRIM64C	A6NLI5	447 aa		4.07	□□□□□ -1.76
UBA3-204	ENST00000461522	IFNL4	K9M1U5	179 aa		4.07	□□□□□ -1.76
UBA3-204	ENST00000461522	SERPINB2	P05120	415 aa		4.07	□□□□□ -1.76
UBA3-204	ENST00000461522	IGKV5-2	P06315	115 aa		4.07	□□□□□ -1.76
UBA3-204	ENST00000461522	MMP10	P09238	476 aa		4.07	□□□□□ -1.76
UBA3-204	ENST00000461522	LINC01547	P58512	204 aa	Predicted RBP	4.07	□□□□□ -1.76
UBA3-204	ENST00000461522	HMGN5	P82970	282 aa	Known RBP	4.07	□□□□□ -1.76
UBA3-204	ENST00000461522	AIMP1	Q12904	312 aa	Known RBP	4.07	□□□□□ -1.76
UBA3-204	ENST00000461522	PDE1C	Q14123	709 aa	Predicted RBP	4.07	□□□□□ -1.76
UBA3-204	ENST00000461522	PPP2R5B	Q15173	497 aa		4.07	□□□□□ -1.76
UBA3-204	ENST00000461522	RABL6	Q3YEC7	729 aa	Predicted RBP	4.07	□□□□□ -1.76
UBA3-204	ENST00000461522	SLC45A4	Q5BKX6	768 aa		4.07	□□□□□ -1.76
UBA3-204	ENST00000461522	METTL2B	Q6P1Q9	378 aa	Known RBP	4.07	□□□□□ -1.76
UBA3-204	ENST00000461522	SLC22A25	Q6T423	547 aa		4.07	□□□□□ -1.76
UBA3-204	ENST00000461522	TDRP	Q86YL5	185 aa		4.07	□□□□□ -1.76
UBA3-204	ENST00000461522	RNF113B	Q8IZP6	322 aa	Known RBP	4.07	□□□□□ -1.76
UBA3-204	ENST00000461522	SPATA6L	Q8N4H0	392 aa		4.07	□□□□□ -1.76
UBA3-204	ENST00000461522	WDSUB1	Q8N9V3	476 aa		4.07	□□□□□ -1.76
UBA3-204	ENST00000461522	HUS1B	Q8NHY5	278 aa		4.07	□□□□□ -1.76
UBA3-204	ENST00000461522	ZNF501	Q96CX3	271 aa	Predicted RBP	4.07	□□□□□ -1.76
UBA3-204	ENST00000461522	METTL2A	Q96IZ6	378 aa	Known RBP	4.07	□□□□□ -1.76
UBA3-204	ENST00000461522	MPP4	Q96JB8	637 aa		4.07	□□□□□ -1.76
UBA3-204	ENST00000461522	IWS1	Q96ST2	819 aa		4.07	□□□□□ -1.76
UBA3-204	ENST00000461522	USP44	Q9H0E7	712 aa		4.07	□□□□□ -1.76
UBA3-204	ENST00000461522	ZNF696	Q9H7X3	374 aa		4.07	□□□□□ -1.76
UBA3-204	ENST00000461522	SCRT2	Q9NQ03	307 aa		4.07	□□□□□ -1.76
UBA3-204	ENST00000461522	LUZP4	Q9P127	313 aa		4.07	□□□□□ -1.76
UBA3-204	ENST00000461522	DDX19B	Q9UMR2	479 aa		4.07	□□□□□ -1.76
UBA3-204	ENST00000461522	SMC3	Q9UQE7	1217 aa		4.07	□□□□□ -1.76
UBA3-204	ENST00000461522	NIP7	Q9Y221	180 aa	Known RBP eCLIP	4.07	□□□□□ -1.76
UBA3-204	ENST00000461522	NOTCH3	Q9UM47	2321 aa		4.07	□□□□□ -1.76
UBA3-204	ENST00000461522	ITGB4	P16144	1822 aa		4.07	□□□□□ -1.76
UBA3-204	ENST00000461522	KDM3B	Q7LBC6	1761 aa		4.07	□□□□□ -1.76
UBA3-204	ENST00000461522	DOT1L	Q8TEK3	1739 aa		4.07	□□□□□ -1.76
UBA3-204	ENST00000461522	PXDNL	A1KZ92	1463 aa		4.06	□□□□□ -1.76
UBA3-204	ENST00000461522	SNED1	Q8TER0	1413 aa		4.06	□□□□□ -1.76
UBA3-204	ENST00000461522	RTL9	Q8NET4	1388 aa		4.06	□□□□□ -1.76
UBA3-204	ENST00000461522	DLG5	Q8TDM6	1919 aa		4.06	□□□□□ -1.76
UBA3-204	ENST00000461522	FAM170A	A1A519	330 aa		4.06	□□□□□ -1.76
UBA3-204	ENST00000461522	PES1	O00541	588 aa	Known RBP	4.06	□□□□□ -1.76
UBA3-204	ENST00000461522	PIP5K1C	O60331	668 aa		4.06	□□□□□ -1.76
UBA3-204	ENST00000461522	BBOX1	O75936	387 aa		4.06	□□□□□ -1.76
UBA3-204	ENST00000461522	APOH	P02749	345 aa	Predicted RBP	4.06	□□□□□ -1.76
UBA3-204	ENST00000461522	IRF1	P10914	325 aa		4.06	□□□□□ -1.76
UBA3-204	ENST00000461522	CORO1A	P31146	461 aa	Known RBP	4.06	□□□□□ -1.76
UBA3-204	ENST00000461522	PIK3CA	P42336	1068 aa		4.06	□□□□□ -1.76
UBA3-204	ENST00000461522	HAL	P42357	657 aa		4.06	□□□□□ -1.76
UBA3-204	ENST00000461522	VEGFC	P49767	419 aa		4.06	□□□□□ -1.76
UBA3-204	ENST00000461522	NUCB1	Q02818	461 aa		4.06	□□□□□ -1.76
UBA3-204	ENST00000461522	MVP	Q14764	893 aa	Known RBP	4.06	□□□□□ -1.76
UBA3-204	ENST00000461522	SPECC1	Q5M775	1068 aa		4.06	□□□□□ -1.76
UBA3-204	ENST00000461522	TAF3	Q5VWG9	929 aa		4.06	□□□□□ -1.76
UBA3-204	ENST00000461522	SUSD4	Q5VX71	490 aa		4.06	□□□□□ -1.76
UBA3-204	ENST00000461522	HIST2H2BD	Q6DRA6	164 aa		4.06	□□□□□ -1.76
UBA3-204	ENST00000461522	CFAP161	Q6P656	301 aa		4.06	□□□□□ -1.76
UBA3-204	ENST00000461522	MMS22L	Q6ZRQ5	1243 aa		4.06	□□□□□ -1.76
UBA3-204	ENST00000461522	LRRTM4	Q86VH4	590 aa		4.06	□□□□□ -1.76
UBA3-204	ENST00000461522	RPAP2	Q8IXW5	612 aa	Predicted RBP	4.06	□□□□□ -1.76
UBA3-204	ENST00000461522	CNBD1	Q8NA66	436 aa		4.06	□□□□□ -1.76
UBA3-204	ENST00000461522	SLC24A4	Q8NFF2	622 aa		4.06	□□□□□ -1.76
UBA3-204	ENST00000461522	ALG14	Q96F25	216 aa		4.06	□□□□□ -1.76
UBA3-204	ENST00000461522	ZNF830	Q96NB3	372 aa	Predicted RBP	4.06	□□□□□ -1.76
UBA3-204	ENST00000461522	SCLT1	Q96NL6	688 aa		4.06	□□□□□ -1.76

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