RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 NEK3P51956 506 aa3.71□□□□□ -1.82
RBM39-220ENST00000455343 HK3P52790 923 aa3.71□□□□□ -1.82
RBM39-220ENST00000455343 B4GALNT1Q00973 533 aa3.71□□□□□ -1.82
RBM39-220ENST00000455343 PPARDQ03181 441 aa3.71□□□□□ -1.82
RBM39-220ENST00000455343 CUL4BQ13620 913 aa3.71□□□□□ -1.82
RBM39-220ENST00000455343 HLTFQ14527 1009 aaKnown RBP eCLIP3.71□□□□□ -1.82
RBM39-220ENST00000455343 NR1D2Q14995 579 aa3.71□□□□□ -1.82
RBM39-220ENST00000455343 ELOCQ15369 112 aa3.71□□□□□ -1.82
RBM39-220ENST00000455343 CNGA2Q16280 664 aa3.71□□□□□ -1.82
RBM39-220ENST00000455343 MAN2A1Q16706 1144 aa3.71□□□□□ -1.82
RBM39-220ENST00000455343 CLPPQ16740 277 aaPredicted RBP3.71□□□□□ -1.82
RBM39-220ENST00000455343 FAM214AQ32MH5 1076 aa3.71□□□□□ -1.82
RBM39-220ENST00000455343 LACTB2Q53H82 288 aaPredicted RBP3.71□□□□□ -1.82
RBM39-220ENST00000455343 CERCAMQ5T4B2 595 aa3.71□□□□□ -1.82
RBM39-220ENST00000455343 FBXL22Q6P050 247 aa3.71□□□□□ -1.82
RBM39-220ENST00000455343 SHC4Q6S5L8 630 aa3.71□□□□□ -1.82
RBM39-220ENST00000455343 MACC1Q6ZN28 852 aa3.71□□□□□ -1.82
RBM39-220ENST00000455343 DPY19L3Q6ZPD9 716 aa3.71□□□□□ -1.82
RBM39-220ENST00000455343 UBE2R2Q712K3 238 aaPredicted RBP3.71□□□□□ -1.82
RBM39-220ENST00000455343 TAC4Q86UU9 113 aa3.71□□□□□ -1.82
RBM39-220ENST00000455343 CHSY1Q86X52 802 aa3.71□□□□□ -1.82
RBM39-220ENST00000455343 C17orf82Q86X59 251 aaPredicted RBP3.71□□□□□ -1.82
RBM39-220ENST00000455343 ZZZ3Q8IYH5 903 aa3.71□□□□□ -1.82
RBM39-220ENST00000455343 ZNF683Q8IZ20 524 aa3.71□□□□□ -1.82
RBM39-220ENST00000455343 UNC5BQ8IZJ1 945 aa3.71□□□□□ -1.82
RBM39-220ENST00000455343 LINC00301Q8NCQ3 95 aa3.71□□□□□ -1.82
RBM39-220ENST00000455343 FBXL13Q8NEE6 735 aa3.71□□□□□ -1.82
RBM39-220ENST00000455343 PPP1R14CQ8TAE6 165 aa3.71□□□□□ -1.82
RBM39-220ENST00000455343 APOBEC4Q8WW27 367 aaKnown RBP3.71□□□□□ -1.82
RBM39-220ENST00000455343 JPH3Q8WXH2 748 aaPredicted RBP3.71□□□□□ -1.82
RBM39-220ENST00000455343 TFAP2BQ92481 460 aa3.71□□□□□ -1.82
RBM39-220ENST00000455343 RAB7BQ96AH8 199 aa3.71□□□□□ -1.82
RBM39-220ENST00000455343 DHX58Q96C10 678 aa3.71□□□□□ -1.82
RBM39-220ENST00000455343 PPP1R16AQ96I34 528 aa3.71□□□□□ -1.82
RBM39-220ENST00000455343 CCDC114Q96M63 670 aa3.71□□□□□ -1.82
RBM39-220ENST00000455343 TAAR9Q96RI9 348 aa3.71□□□□□ -1.82
RBM39-220ENST00000455343 MLST8Q9BVC4 326 aa3.71□□□□□ -1.82
RBM39-220ENST00000455343 EDEM3Q9BZQ6 932 aa3.71□□□□□ -1.82
RBM39-220ENST00000455343 SLC13A1Q9BZW2 595 aa3.71□□□□□ -1.82
RBM39-220ENST00000455343 ENKD1Q9H0I2 346 aa3.71□□□□□ -1.82
RBM39-220ENST00000455343 BLZF1Q9H2G9 400 aa3.71□□□□□ -1.82
RBM39-220ENST00000455343 MAGEF1Q9HAY2 307 aa3.71□□□□□ -1.82
RBM39-220ENST00000455343 DYRK4Q9NR20 520 aa3.71□□□□□ -1.82
RBM39-220ENST00000455343 HESX1Q9UBX0 185 aa3.71□□□□□ -1.82
RBM39-220ENST00000455343 IL36AQ9UHA7 158 aa3.71□□□□□ -1.82
RBM39-220ENST00000455343 IPO11Q9UI26 975 aaKnown RBP3.71□□□□□ -1.82
RBM39-220ENST00000455343 VPS51Q9UID3 782 aa3.71□□□□□ -1.82
RBM39-220ENST00000455343 SLC25A13Q9UJS0 675 aa3.71□□□□□ -1.82
RBM39-220ENST00000455343 PILRAQ9UKJ1 303 aa3.71□□□□□ -1.82
RBM39-220ENST00000455343 PDZD2O15018 2839 aa3.71□□□□□ -1.82
RBM39-220ENST00000455343 SETD2Q9BYW2 2564 aaPredicted RBP3.7□□□□□ -1.82
RBM39-220ENST00000455343 CXorf51AA0A1B0GTR3 108 aa3.7□□□□□ -1.82
RBM39-220ENST00000455343 I6L893 689 aaPredicted RBP3.7□□□□□ -1.82
RBM39-220ENST00000455343 M0QYT0 321 aa3.7□□□□□ -1.82
RBM39-220ENST00000455343 PPP1R12AO14974 1030 aaPredicted RBP3.7□□□□□ -1.82
RBM39-220ENST00000455343 SPTLC2O15270 562 aa3.7□□□□□ -1.82
RBM39-220ENST00000455343 DUX1O43812 170 aa3.7□□□□□ -1.82
RBM39-220ENST00000455343 RAD1O60671 282 aa3.7□□□□□ -1.82
RBM39-220ENST00000455343 VPS4BO75351 444 aa3.7□□□□□ -1.82
RBM39-220ENST00000455343 CLDN11O75508 207 aa3.7□□□□□ -1.82
RBM39-220ENST00000455343 ZMPSTE24O75844 475 aa3.7□□□□□ -1.82
RBM39-220ENST00000455343 CPNE6O95741 557 aa3.7□□□□□ -1.82
RBM39-220ENST00000455343 TRUB2O95900 331 aaKnown RBP3.7□□□□□ -1.82
RBM39-220ENST00000455343 APOEP02649 317 aa3.7□□□□□ -1.82
RBM39-220ENST00000455343 PAEPP09466 180 aa3.7□□□□□ -1.82
RBM39-220ENST00000455343 ALPIP09923 528 aa3.7□□□□□ -1.82
RBM39-220ENST00000455343 CD19P15391 556 aa3.7□□□□□ -1.82
RBM39-220ENST00000455343 RRM1P23921 792 aa3.7□□□□□ -1.82
RBM39-220ENST00000455343 OAS2P29728 719 aaKnown RBP3.7□□□□□ -1.82
RBM39-220ENST00000455343 CCR1P32246 355 aa3.7□□□□□ -1.82
RBM39-220ENST00000455343 MXI1P50539 228 aa3.7□□□□□ -1.82
RBM39-220ENST00000455343 THOP1P52888 689 aa3.7□□□□□ -1.82
RBM39-220ENST00000455343 MAPK10P53779 464 aa3.7□□□□□ -1.82
RBM39-220ENST00000455343 CDH4P55283 916 aa3.7□□□□□ -1.82
RBM39-220ENST00000455343 PITX1P78337 314 aaPredicted RBP3.7□□□□□ -1.82
RBM39-220ENST00000455343 KRT83P78385 493 aa3.7□□□□□ -1.82
RBM39-220ENST00000455343 CEBPZQ03701 1054 aaKnown RBP3.7□□□□□ -1.82
RBM39-220ENST00000455343 CDC20Q12834 499 aa3.7□□□□□ -1.82
RBM39-220ENST00000455343 SGCGQ13326 291 aa3.7□□□□□ -1.82
RBM39-220ENST00000455343 CUL2Q13617 745 aa3.7□□□□□ -1.82
RBM39-220ENST00000455343 RABEP1Q15276 862 aa3.7□□□□□ -1.82
RBM39-220ENST00000455343 ALG11Q2TAA5 492 aa3.7□□□□□ -1.82
RBM39-220ENST00000455343 RABGAP1LQ5R372 815 aa3.7□□□□□ -1.82
RBM39-220ENST00000455343 FAXCQ5TGI0 409 aa3.7□□□□□ -1.82
RBM39-220ENST00000455343 KCTD16Q68DU8 428 aa3.7□□□□□ -1.82
RBM39-220ENST00000455343 PARS2Q7L3T8 475 aaKnown RBP3.7□□□□□ -1.82
RBM39-220ENST00000455343 TMEM110Q86TL2 294 aa3.7□□□□□ -1.82
RBM39-220ENST00000455343 SETD3Q86TU7 594 aaPredicted RBP3.7□□□□□ -1.82
RBM39-220ENST00000455343 PIM3Q86V86 326 aa3.7□□□□□ -1.82
RBM39-220ENST00000455343 GKN2Q86XP6 184 aa3.7□□□□□ -1.82
RBM39-220ENST00000455343 SFTPA2Q8IWL1 248 aa3.7□□□□□ -1.82
RBM39-220ENST00000455343 CACNA2D3Q8IZS8 1091 aa3.7□□□□□ -1.82
RBM39-220ENST00000455343 BMPERQ8N8U9 685 aa3.7□□□□□ -1.82
RBM39-220ENST00000455343 DCAF4L2Q8NA75 395 aa3.7□□□□□ -1.82
RBM39-220ENST00000455343 TEX19Q8NA77 164 aa3.7□□□□□ -1.82
RBM39-220ENST00000455343 ATP11CQ8NB49 1132 aa3.7□□□□□ -1.82
RBM39-220ENST00000455343 CCDC150Q8NCX0 1101 aa3.7□□□□□ -1.82
RBM39-220ENST00000455343 PIK3C3Q8NEB9 887 aa3.7□□□□□ -1.82
RBM39-220ENST00000455343 HIST1H2AHQ96KK5 128 aa3.7□□□□□ -1.82
RBM39-220ENST00000455343 RPRD1AQ96P16 312 aaPredicted RBP3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms