RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 DSG4Q86SJ6 1040 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 C12orf40Q86WS4 652 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 TREML1Q86YW5 311 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 NRSN1Q8IZ57 195 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 CHCHD4Q8N4Q1 142 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 ZBTB2Q8N680 514 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 CPSF7Q8N684 471 aaKnown RBP10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 GIMAP7Q8NHV1 300 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 ACTRT2Q8TDY3 377 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 DCUN1D1Q96GG9 259 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 PPP1R16AQ96I34 528 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 SLC30A3Q99726 388 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 ZSCAN5AQ9BUG6 496 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 FAM126AQ9BYI3 521 aaPredicted RBP10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 SHCBP1LQ9BZQ2 653 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 FAM83DQ9H4H8 585 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 MEAF6Q9HAF1 191 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 PCDH12Q9NPG4 1184 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 TAS2R1Q9NYW7 299 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 CD274Q9NZQ7 290 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 GALPQ9UBC7 116 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 TRAF6Q9Y4K3 522 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 PCDHB11Q9Y5F2 797 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 PLXNB3Q9ULL4 1909 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 C16orf96A6NNT2 1141 aa10.43□□□□□ -0.74
VIPAS39-203ENST00000448935 H0Y858 1186 aa10.43□□□□□ -0.74
VIPAS39-203ENST00000448935 GSC2O15499 205 aa10.43□□□□□ -0.74
VIPAS39-203ENST00000448935 GPR39O43194 453 aa10.43□□□□□ -0.74
VIPAS39-203ENST00000448935 DCXO43602 365 aa10.43□□□□□ -0.74
VIPAS39-203ENST00000448935 WFS1O76024 890 aa10.43□□□□□ -0.74
VIPAS39-203ENST00000448935 AP2A2O94973 939 aa10.43□□□□□ -0.74
VIPAS39-203ENST00000448935 TRIM16O95361 564 aa10.43□□□□□ -0.74
VIPAS39-203ENST00000448935 RPS17P08708 135 aaKnown RBP10.43□□□□□ -0.74
VIPAS39-203ENST00000448935 THRAP10827 490 aa10.43□□□□□ -0.74
VIPAS39-203ENST00000448935 FCARP24071 287 aa10.43□□□□□ -0.74
VIPAS39-203ENST00000448935 EPHA3P29320 983 aa10.43□□□□□ -0.74
VIPAS39-203ENST00000448935 EEF1DP29692 281 aaKnown RBP10.43□□□□□ -0.74
VIPAS39-203ENST00000448935 COPAP53621 1224 aa10.43□□□□□ -0.74
VIPAS39-203ENST00000448935 CLCQ05315 142 aa10.43□□□□□ -0.74
VIPAS39-203ENST00000448935 KDSRQ06136 332 aa10.43□□□□□ -0.74
VIPAS39-203ENST00000448935 ELP6Q0PNE2 266 aa10.43□□□□□ -0.74
VIPAS39-203ENST00000448935 RUNX3Q13761 415 aa10.43□□□□□ -0.74
VIPAS39-203ENST00000448935 ZNF284Q2VY69 593 aa10.43□□□□□ -0.74
VIPAS39-203ENST00000448935 HNRNPA1L2Q32P51 320 aaKnown RBP10.43□□□□□ -0.74
VIPAS39-203ENST00000448935 ATP13A5Q4VNC0 1218 aa10.43□□□□□ -0.74
VIPAS39-203ENST00000448935 NXNQ6DKJ4 435 aa10.43□□□□□ -0.74
VIPAS39-203ENST00000448935 METTL2BQ6P1Q9 378 aaKnown RBP10.43□□□□□ -0.74
VIPAS39-203ENST00000448935 TRAM1L1Q8N609 369 aa10.43□□□□□ -0.74
VIPAS39-203ENST00000448935 TERB1Q8NA31 727 aa10.43□□□□□ -0.74
VIPAS39-203ENST00000448935 MOCOSQ96EN8 888 aa10.43□□□□□ -0.74
VIPAS39-203ENST00000448935 OR52B2Q96RD2 323 aa10.43□□□□□ -0.74
VIPAS39-203ENST00000448935 BOCQ9BWV1 1114 aa10.43□□□□□ -0.74
VIPAS39-203ENST00000448935 SPATA16Q9BXB7 569 aa10.43□□□□□ -0.74
VIPAS39-203ENST00000448935 WDR55Q9H6Y2 383 aaPredicted RBP10.43□□□□□ -0.74
VIPAS39-203ENST00000448935 SUN2Q9UH99 717 aa10.43□□□□□ -0.74
VIPAS39-203ENST00000448935 MTF2Q9Y483 593 aaPredicted RBP10.43□□□□□ -0.74
VIPAS39-203ENST00000448935 PLXNA2O75051 1894 aa10.43□□□□□ -0.74
VIPAS39-203ENST00000448935 IQCF5A8MTL0 148 aa10.42□□□□□ -0.74
VIPAS39-203ENST00000448935 KPNA3O00505 521 aaPredicted RBP10.42□□□□□ -0.74
VIPAS39-203ENST00000448935 SDHDO14521 159 aa10.42□□□□□ -0.74
VIPAS39-203ENST00000448935 AZIN1O14977 448 aa10.42□□□□□ -0.74
VIPAS39-203ENST00000448935 VPS4BO75351 444 aa10.42□□□□□ -0.74
VIPAS39-203ENST00000448935 CHEK2O96017 543 aa10.42□□□□□ -0.74
VIPAS39-203ENST00000448935 CTSLP07711 333 aa10.42□□□□□ -0.74
VIPAS39-203ENST00000448935 ITGB7P26010 798 aa10.42□□□□□ -0.74
VIPAS39-203ENST00000448935 SLC6A11P48066 632 aa10.42□□□□□ -0.74
VIPAS39-203ENST00000448935 BTKQ06187 659 aa10.42□□□□□ -0.74
VIPAS39-203ENST00000448935 HYAL1Q12794 435 aa10.42□□□□□ -0.74
VIPAS39-203ENST00000448935 KLF10Q13118 480 aa10.42□□□□□ -0.74
VIPAS39-203ENST00000448935 ELAVL3Q14576 367 aaKnown RBP10.42□□□□□ -0.74
VIPAS39-203ENST00000448935 NAA25Q14CX7 972 aa10.42□□□□□ -0.74
VIPAS39-203ENST00000448935 HERC3Q15034 1050 aa10.42□□□□□ -0.74
VIPAS39-203ENST00000448935 TGFBIQ15582 683 aa10.42□□□□□ -0.74
VIPAS39-203ENST00000448935 GAB4Q2WGN9 574 aa10.42□□□□□ -0.74
VIPAS39-203ENST00000448935 WASHC2DQ5SRD0 308 aa10.42□□□□□ -0.74
VIPAS39-203ENST00000448935 GPRC6AQ5T6X5 926 aa10.42□□□□□ -0.74
VIPAS39-203ENST00000448935 TANGO2Q6ICL3 276 aa10.42□□□□□ -0.74
VIPAS39-203ENST00000448935 SYCE2Q6PIF2 218 aa10.42□□□□□ -0.74
VIPAS39-203ENST00000448935 VITQ6UXI7 678 aa10.42□□□□□ -0.74
VIPAS39-203ENST00000448935 RINLQ6ZS11 566 aa10.42□□□□□ -0.74
VIPAS39-203ENST00000448935 OR56A4Q8NGH8 313 aa10.42□□□□□ -0.74
VIPAS39-203ENST00000448935 RP9Q8TA86 221 aaKnown RBP10.42□□□□□ -0.74
VIPAS39-203ENST00000448935 ELSPBP1Q96BH3 223 aa10.42□□□□□ -0.74
VIPAS39-203ENST00000448935 ZFYVE19Q96K21 471 aa10.42□□□□□ -0.74
VIPAS39-203ENST00000448935 RIPOR3Q96MK2 946 aa10.42□□□□□ -0.74
VIPAS39-203ENST00000448935 CCT7Q99832 543 aa10.42□□□□□ -0.74
VIPAS39-203ENST00000448935 GDF15Q99988 308 aa10.42□□□□□ -0.74
VIPAS39-203ENST00000448935 APOL5Q9BWW9 433 aa10.42□□□□□ -0.74
VIPAS39-203ENST00000448935 NUSAP1Q9BXS6 441 aaKnown RBP10.42□□□□□ -0.74
VIPAS39-203ENST00000448935 CADM1Q9BY67 442 aaKnown RBP10.42□□□□□ -0.74
VIPAS39-203ENST00000448935 MID1IP1Q9NPA3 183 aa10.42□□□□□ -0.74
VIPAS39-203ENST00000448935 HPS4Q9NQG7 708 aa10.42□□□□□ -0.74
VIPAS39-203ENST00000448935 ACSS2Q9NR19 701 aa10.42□□□□□ -0.74
VIPAS39-203ENST00000448935 DYRK4Q9NR20 520 aa10.42□□□□□ -0.74
VIPAS39-203ENST00000448935 OARD1Q9Y530 152 aa10.42□□□□□ -0.74
VIPAS39-203ENST00000448935 MUC22E2RYF6 1773 aaPredicted RBP10.42□□□□□ -0.74
VIPAS39-203ENST00000448935 TBC1D3BA6NDS4 549 aa10.41□□□□□ -0.74
VIPAS39-203ENST00000448935 PABPN1LA6NDY0 278 aaKnown RBP10.41□□□□□ -0.74
VIPAS39-203ENST00000448935 EPOPA6NHQ4 379 aa10.41□□□□□ -0.74
VIPAS39-203ENST00000448935 PRRT4C9JH25 899 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms