RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 HALP42357 657 aa27.73■■■□□ 2.03
CBX4-202ENST00000448310 MC1RQ01726 317 aa27.73■■■□□ 2.03
CBX4-202ENST00000448310 PTPRCAPQ14761 206 aa27.73■■■□□ 2.03
CBX4-202ENST00000448310 TFDP3Q5H9I0 405 aa27.73■■■□□ 2.03
CBX4-202ENST00000448310 AMZ2Q86W34 360 aa27.73■■■□□ 2.03
CBX4-202ENST00000448310 CNGA4Q8IV77 575 aa27.73■■■□□ 2.03
CBX4-202ENST00000448310 CCDC50Q8IVM0 306 aa27.73■■■□□ 2.03
CBX4-202ENST00000448310 RBM12BQ8IXT5 1001 aaKnown RBP27.73■■■□□ 2.03
CBX4-202ENST00000448310 C9orf43Q8TAL5 461 aaPredicted RBP27.73■■■□□ 2.03
CBX4-202ENST00000448310 ZDHHC12Q96GR4 267 aa27.73■■■□□ 2.03
CBX4-202ENST00000448310 QKIQ96PU8 341 aaKnown RBP eCLIP27.73■■■□□ 2.03
CBX4-202ENST00000448310 HACD3Q9P035 362 aa27.73■■■□□ 2.03
CBX4-202ENST00000448310 CROTQ9UKG9 612 aa27.73■■■□□ 2.03
CBX4-202ENST00000448310 NBASA2RRP1 2371 aa27.72■■■□□ 2.03
CBX4-202ENST00000448310 PTPN13Q12923 2485 aa27.72■■■□□ 2.03
CBX4-202ENST00000448310 OR2AG2A6NM03 316 aa27.72■■■□□ 2.03
CBX4-202ENST00000448310 GAPDHSO14556 408 aaPredicted RBP27.72■■■□□ 2.03
CBX4-202ENST00000448310 PBLDP30039 288 aaPredicted RBP27.72■■■□□ 2.03
CBX4-202ENST00000448310 MAGEA1P43355 309 aa27.72■■■□□ 2.03
CBX4-202ENST00000448310 IL11RAQ14626 422 aa27.72■■■□□ 2.03
CBX4-202ENST00000448310 GPRC6AQ5T6X5 926 aa27.72■■■□□ 2.03
CBX4-202ENST00000448310 ZDHHC20Q5W0Z9 365 aa27.72■■■□□ 2.03
CBX4-202ENST00000448310 TMEM220Q6QAJ8 160 aa27.72■■■□□ 2.03
CBX4-202ENST00000448310 APOBEC4Q8WW27 367 aaKnown RBP27.72■■■□□ 2.03
CBX4-202ENST00000448310 KLHL6Q8WZ60 621 aa27.72■■■□□ 2.03
CBX4-202ENST00000448310 STAMBPL1Q96FJ0 436 aa27.72■■■□□ 2.03
CBX4-202ENST00000448310 EPN3Q9H201 632 aa27.72■■■□□ 2.03
CBX4-202ENST00000448310 TSPY26PQ9H489 355 aa27.72■■■□□ 2.03
CBX4-202ENST00000448310 C10orf88Q9H8K7 445 aa27.72■■■□□ 2.03
CBX4-202ENST00000448310 RSPH14Q9UHP6 348 aa27.72■■■□□ 2.03
CBX4-202ENST00000448310 LNPEPQ9UIQ6 1025 aa27.72■■■□□ 2.03
CBX4-202ENST00000448310 TBX2Q13207 712 aaPredicted RBP27.71■■■□□ 2.03
CBX4-202ENST00000448310 NFE2L1Q14494 772 aa27.71■■■□□ 2.03
CBX4-202ENST00000448310 RPE65Q16518 533 aa27.71■■■□□ 2.03
CBX4-202ENST00000448310 LDLRAP1Q5SW96 308 aa27.71■■■□□ 2.03
CBX4-202ENST00000448310 KATNAL2Q8IYT4 538 aa27.71■■■□□ 2.03
CBX4-202ENST00000448310 DDHD1Q8NEL9 900 aa27.71■■■□□ 2.03
CBX4-202ENST00000448310 DTX3LQ8TDB6 740 aa27.71■■■□□ 2.03
CBX4-202ENST00000448310 NAT14Q8WUY8 206 aa27.71■■■□□ 2.03
CBX4-202ENST00000448310 ABHD17AQ96GS6 310 aa27.71■■■□□ 2.03
CBX4-202ENST00000448310 VAT1Q99536 393 aa27.71■■■□□ 2.03
CBX4-202ENST00000448310 ZCCHC2Q9C0B9 1178 aaKnown RBP27.71■■■□□ 2.03
CBX4-202ENST00000448310 EPHA6Q9UF33 1036 aa27.71■■■□□ 2.03
CBX4-202ENST00000448310 PKP3Q9Y446 797 aa27.71■■■□□ 2.03
CBX4-202ENST00000448310 SPAG6O75602 509 aa27.7■■■□□ 2.02
CBX4-202ENST00000448310 ZRANB2O95218 330 aaKnown RBP eCLIP27.7■■■□□ 2.02
CBX4-202ENST00000448310 FGF5P12034 268 aa27.7■■■□□ 2.02
CBX4-202ENST00000448310 HLA-DPA1P20036 260 aa27.7■■■□□ 2.02
CBX4-202ENST00000448310 HADHBP55084 474 aaKnown RBP27.7■■■□□ 2.02
CBX4-202ENST00000448310 DMPKQ09013 629 aa27.7■■■□□ 2.02
CBX4-202ENST00000448310 MPP3Q13368 585 aa27.7■■■□□ 2.02
CBX4-202ENST00000448310 BEND7Q8N7W2 519 aaPredicted RBP27.7■■■□□ 2.02
CBX4-202ENST00000448310 KRT35Q92764 455 aa27.7■■■□□ 2.02
CBX4-202ENST00000448310 HEMGNQ9BXL5 484 aa27.7■■■□□ 2.02
CBX4-202ENST00000448310 IGHV5-51A0A0C4DH38 117 aa27.69■■■□□ 2.02
CBX4-202ENST00000448310 KCNJ13O60928 360 aa27.69■■■□□ 2.02
CBX4-202ENST00000448310 KATNA1O75449 491 aa27.69■■■□□ 2.02
CBX4-202ENST00000448310 TIAF1O95411 115 aa27.69■■■□□ 2.02
CBX4-202ENST00000448310 AGTP01019 485 aa27.69■■■□□ 2.02
CBX4-202ENST00000448310 NELFEP18615 380 aaKnown RBP27.69■■■□□ 2.02
CBX4-202ENST00000448310 FECHP22830 423 aa27.69■■■□□ 2.02
CBX4-202ENST00000448310 KCNAB1Q14722 419 aa27.69■■■□□ 2.02
CBX4-202ENST00000448310 DET1Q7L5Y6 550 aa27.69■■■□□ 2.02
CBX4-202ENST00000448310 RCOR2Q8IZ40 523 aa27.69■■■□□ 2.02
CBX4-202ENST00000448310 FICDQ9BVA6 458 aa27.69■■■□□ 2.02
CBX4-202ENST00000448310 FSD1LQ9BXM9 530 aa27.69■■■□□ 2.02
CBX4-202ENST00000448310 RAB33BQ9H082 229 aa27.69■■■□□ 2.02
CBX4-202ENST00000448310 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP27.69■■■□□ 2.02
CBX4-202ENST00000448310 CFAP20Q9Y6A4 193 aaKnown RBP27.69■■■□□ 2.02
CBX4-202ENST00000448310 FLNCQ14315 2725 aa27.69■■■□□ 2.02
CBX4-202ENST00000448310 FURINP09958 794 aa27.68■■■□□ 2.02
CBX4-202ENST00000448310 RBL1P28749 1068 aa27.68■■■□□ 2.02
CBX4-202ENST00000448310 AKT1P31749 480 aa27.68■■■□□ 2.02
CBX4-202ENST00000448310 ITGA9Q13797 1035 aa27.68■■■□□ 2.02
CBX4-202ENST00000448310 ERV3-1Q14264 604 aa27.68■■■□□ 2.02
CBX4-202ENST00000448310 PLCL1Q15111 1095 aa27.68■■■□□ 2.02
CBX4-202ENST00000448310 CRTC2Q53ET0 693 aaPredicted RBP27.68■■■□□ 2.02
CBX4-202ENST00000448310 COLEC12Q5KU26 742 aa27.68■■■□□ 2.02
CBX4-202ENST00000448310 FNBP1LQ5T0N5 605 aa27.68■■■□□ 2.02
CBX4-202ENST00000448310 PPP1R3BQ86XI6 285 aa27.68■■■□□ 2.02
CBX4-202ENST00000448310 GORASP1Q9BQQ3 440 aa27.68■■■□□ 2.02
CBX4-202ENST00000448310 IMP3Q9NV31 184 aaKnown RBP27.68■■■□□ 2.02
CBX4-202ENST00000448310 PCDHB3Q9Y5E6 796 aa27.68■■■□□ 2.02
CBX4-202ENST00000448310 ARL5AQ9Y689 179 aa27.68■■■□□ 2.02
CBX4-202ENST00000448310 DOPEY2Q9Y3R5 2298 aa27.67■■■□□ 2.02
CBX4-202ENST00000448310 HACD1B0YJ81 288 aa27.67■■■□□ 2.02
CBX4-202ENST00000448310 STX7O15400 261 aaKnown RBP27.67■■■□□ 2.02
CBX4-202ENST00000448310 FOLR1P15328 257 aa27.67■■■□□ 2.02
CBX4-202ENST00000448310 OLIG2Q13516 323 aa27.67■■■□□ 2.02
CBX4-202ENST00000448310 SKOR2Q2VWA4 1001 aaPredicted RBP27.67■■■□□ 2.02
CBX4-202ENST00000448310 DUS1LQ6P1R4 473 aaKnown RBP27.67■■■□□ 2.02
CBX4-202ENST00000448310 CERS6Q6ZMG9 384 aa27.67■■■□□ 2.02
CBX4-202ENST00000448310 ZNF398Q8TD17 642 aa27.67■■■□□ 2.02
CBX4-202ENST00000448310 COL26A1Q96A83 441 aa27.67■■■□□ 2.02
CBX4-202ENST00000448310 FAM8A1Q9UBU6 413 aa27.67■■■□□ 2.02
CBX4-202ENST00000448310 TRHDEQ9UKU6 1024 aa27.67■■■□□ 2.02
CBX4-202ENST00000448310 KCNMB2Q9Y691 235 aa27.67■■■□□ 2.02
CBX4-202ENST00000448310 MAST4O15021 2626 aa27.67■■■□□ 2.02
CBX4-202ENST00000448310 GOLGA6L3A6NEY3 463 aa27.66■■■□□ 2.02
CBX4-202ENST00000448310 H7C0C1 242 aa27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms