RNA–Protein interactions for RNA: ENST00000441222.7

USP46-201, Transcript of ubiquitin specific peptidase 46, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP46, Length 7,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-201ENST00000441222 NDUFV1P49821 464 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 RORCP51449 518 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 CEBPGP53567 150 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 TAS2R50P59544 299 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 PLEKHG6Q3KR16 790 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 LDLRAP1Q5SW96 308 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 TMEM161BQ8NDZ6 487 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 SLC22A18Q96BI1 424 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 CITED4Q96RK1 184 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 MARCH7Q9H992 704 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 BPIFA1Q9NP55 256 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 EQTNQ9NQ60 294 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 FARSBQ9NSD9 589 aaKnown RBP6.61□□□□□ -1.35
USP46-201ENST00000441222 DNAJC28Q9NX36 388 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 DEC1Q9P2X7 70 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 TMEM5Q9Y2B1 443 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 GLYATL1P3A0A0U1RQE8 302 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 TCRBV9S1A1TA0A576 114 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 CLPXO76031 633 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 BPGMP07738 259 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 ZNF3P17036 446 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 SLC1A2P43004 574 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 WNT3AP56704 352 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 CRADDP78560 199 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 TEX44Q53QW1 395 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 CCSAPQ6IQ19 270 aaPredicted RBP6.61□□□□□ -1.35
USP46-201ENST00000441222 FRMD7Q6ZUT3 714 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 SLC26A9Q7LBE3 791 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 TNS4Q8IZW8 715 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 GPC2Q8N158 579 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 RAB2BQ8WUD1 216 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 FEM1CQ96JP0 617 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 ZNF514Q96K75 400 aaPredicted RBP6.61□□□□□ -1.35
USP46-201ENST00000441222 CNDP2Q96KP4 475 aaKnown RBP6.61□□□□□ -1.35
USP46-201ENST00000441222 NKIRAS2Q9NYR9 191 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 ZNF224Q9NZL3 707 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 USP20Q9Y2K6 914 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 PCDHGA11Q9Y5H2 935 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 LRRC72A6NJI9 287 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 SLC33A1O00400 549 aaPredicted RBP6.61□□□□□ -1.35
USP46-201ENST00000441222 IL7RP16871 459 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 HSD3B2P26439 372 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 RFX5P48382 616 aaPredicted RBP6.61□□□□□ -1.35
USP46-201ENST00000441222 ERVK-21P61565 698 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 TUBA3CQ13748 450 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 NTRK3Q16288 839 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 IRGQQ8WZA9 623 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 CENPNQ96H22 339 aaPredicted RBP6.61□□□□□ -1.35
USP46-201ENST00000441222 SLC39A3Q9BRY0 314 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 CCDC86Q9H6F5 360 aaKnown RBP6.61□□□□□ -1.35
USP46-201ENST00000441222 RGS17Q9UGC6 210 aaPredicted RBP6.61□□□□□ -1.35
USP46-201ENST00000441222 SLC15A5A6NIM6 579 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 PI15O43692 258 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 KHKP50053 298 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 VLDLRP98155 873 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 CWF19L1Q69YN2 538 aaKnown RBP6.61□□□□□ -1.35
USP46-201ENST00000441222 AMIGO2Q86SJ2 522 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 DUSP9Q99956 384 aaKnown RBP6.61□□□□□ -1.35
USP46-201ENST00000441222 MRIQ9BWK5 157 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 ALG2Q9H553 416 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 GLOD4Q9HC38 313 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 S100A14Q9HCY8 104 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 CNOT6Q9ULM6 557 aaKnown RBP6.61□□□□□ -1.35
USP46-201ENST00000441222 SPATA31A5Q5VU36 1347 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 SPATA31A7Q8IWB4 1347 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 FAM86B1E9PN63 330 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 MATN2O00339 956 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 AIREO43918 545 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 ITGA10O75578 1167 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 MPIP34949 423 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 CCR10P46092 362 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 CBLBQ13191 982 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 MPP2Q14168 576 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 RNASEH2BQ5TBB1 312 aaKnown RBP6.61□□□□□ -1.35
USP46-201ENST00000441222 ALKBH2Q6NS38 261 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 P2RY8Q86VZ1 359 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 REM2Q8IYK8 340 aaPredicted RBP6.61□□□□□ -1.35
USP46-201ENST00000441222 BRSK1Q8TDC3 778 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 FAM163AQ96GL9 167 aaPredicted RBP6.61□□□□□ -1.35
USP46-201ENST00000441222 TTPALQ9BTX7 342 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 AGXT2Q9BYV1 514 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 MAGEE1Q9HCI5 957 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 LYARQ9NX58 379 aaKnown RBP6.61□□□□□ -1.35
USP46-201ENST00000441222 KANTRA0A1W2PQU2 76 aa6.6□□□□□ -1.35
USP46-201ENST00000441222 TLL1O43897 1013 aa6.6□□□□□ -1.35
USP46-201ENST00000441222 CXCL14O95715 111 aa6.6□□□□□ -1.35
USP46-201ENST00000441222 RPLP0P05388 317 aaKnown RBP6.6□□□□□ -1.35
USP46-201ENST00000441222 AP2S1P53680 142 aaPredicted RBP6.6□□□□□ -1.35
USP46-201ENST00000441222 CTBP1Q13363 440 aa6.6□□□□□ -1.35
USP46-201ENST00000441222 SLC1A5Q15758 541 aa6.6□□□□□ -1.35
USP46-201ENST00000441222 DUPD1Q68J44 220 aa6.6□□□□□ -1.35
USP46-201ENST00000441222 MSANTD2Q6P1R3 559 aa6.6□□□□□ -1.35
USP46-201ENST00000441222 ADGRD2Q7Z7M1 963 aa6.6□□□□□ -1.35
USP46-201ENST00000441222 TRPM4Q8TD43 1214 aa6.6□□□□□ -1.35
USP46-201ENST00000441222 KAT2AQ92830 837 aa6.6□□□□□ -1.35
USP46-201ENST00000441222 KXD1Q9BQD3 176 aa6.6□□□□□ -1.35
USP46-201ENST00000441222 GBA3Q9H227 469 aa6.6□□□□□ -1.35
USP46-201ENST00000441222 CD320Q9NPF0 282 aa6.6□□□□□ -1.35
USP46-201ENST00000441222 TMPRSS4Q9NRS4 437 aa6.6□□□□□ -1.35
USP46-201ENST00000441222 ZNF180Q9UJW8 692 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms