RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 C1RP00736 705 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 PRKCGP05129 697 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 IL6P05231 212 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 UFM1P61960 85 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 PWP1Q13610 501 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 SPATS1Q496A3 300 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 FGD3Q5JSP0 725 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 CASP12Q6UXS9 341 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 SLC15A3Q8IY34 581 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 OR6K2Q8NGY2 324 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 TSPEARQ8WU66 669 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 TMBIM1Q969X1 311 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 BIRC7Q96CA5 298 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 ISOC1Q96CN7 298 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 MYO19Q96H55 970 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 MRGPRX2Q96LB1 330 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 CIPCQ9C0C6 399 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 ADAMTS10Q9H324 1103 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 ARMC7Q9H6L4 198 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 PDP1Q9P0J1 537 aaPredicted RBP6.61□□□□□ -1.35
CSDE1-205ENST00000438362 BTBD3Q9Y2F9 522 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 SNX8Q9Y5X2 465 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 COL4A1P02462 1669 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 LCHNA4D1U4 455 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 TCAF2A6NFQ2 919 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 SUV39H1O43463 412 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 DUSP11O75319 330 aaKnown RBP6.61□□□□□ -1.35
CSDE1-205ENST00000438362 CLDN9O95484 217 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 SNAI1O95863 264 aaPredicted RBP6.61□□□□□ -1.35
CSDE1-205ENST00000438362 DIO3P55073 304 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 CDH4P55283 916 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 CDC42P60953 191 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 POLR2LP62875 67 aaKnown RBP6.61□□□□□ -1.35
CSDE1-205ENST00000438362 ECT2LQ008S8 904 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 SMARCB1Q12824 385 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 TRIM32Q13049 653 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 INAQ16352 499 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 PHKG1Q16816 387 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 ZNF829Q3KNS6 432 aaPredicted RBP6.61□□□□□ -1.35
CSDE1-205ENST00000438362 RBM48Q5RL73 367 aaKnown RBP6.61□□□□□ -1.35
CSDE1-205ENST00000438362 HACD2Q6Y1H2 254 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 GPRIN1Q7Z2K8 1008 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 ITIH5Q86UX2 942 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 P2RY8Q86VZ1 359 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 LIX1Q8N485 282 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 TBC1D19Q8N5T2 526 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 HJURPQ8NCD3 748 aaPredicted RBP6.61□□□□□ -1.35
CSDE1-205ENST00000438362 ZNF420Q8TAQ5 688 aaPredicted RBP6.61□□□□□ -1.35
CSDE1-205ENST00000438362 ATL1Q8WXF7 558 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 ELMO1Q92556 727 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 REPS1Q96D71 796 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 CDK15Q96Q40 435 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 IL12RB2Q99665 862 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 PSME2Q9UL46 239 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 A0A1B0GVM2 712 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 ZBTB42B2RXF5 422 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 KPNA5O15131 536 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 CDK14O94921 469 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 PRAMEF1O95521 474 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 PPIBP23284 216 aaKnown RBP6.6□□□□□ -1.35
CSDE1-205ENST00000438362 STC1P52823 247 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 DGKQP52824 942 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 SNRPD1P62314 119 aaKnown RBP6.6□□□□□ -1.35
CSDE1-205ENST00000438362 PKDCCQ504Y2 493 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 UNC50Q53HI1 259 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 VARS2Q5ST30 1063 aaKnown RBP6.6□□□□□ -1.35
CSDE1-205ENST00000438362 ERICH5Q6P6B1 374 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 SLC2A7Q6PXP3 512 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 TMC5Q6UXY8 1006 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 LINGO4Q6UY18 593 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 PRR23BQ6ZRT6 265 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 UBE2R2Q712K3 238 aaPredicted RBP6.6□□□□□ -1.35
CSDE1-205ENST00000438362 SLC24A5Q71RS6 500 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 DET1Q7L5Y6 550 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 C11orf96Q7Z7L8 435 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 C11orf74Q86VG3 221 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 RASAL3Q86YV0 1011 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 ZDHHC21Q8IVQ6 265 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 ANKFN1Q8N957 763 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 OR5K1Q8NHB7 308 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 MTERF3Q96E29 417 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 ZFYVE19Q96K21 471 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 SPATA17Q96L03 361 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 MAGEB10Q96LZ2 347 aaPredicted RBP6.6□□□□□ -1.35
CSDE1-205ENST00000438362 DERL2Q9GZP9 239 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 TMEM245Q9H330 911 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 KCTD5Q9NXV2 234 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 AHSPQ9NZD4 102 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 CORO2BQ9UQ03 480 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 CAB39Q9Y376 341 aaPredicted RBP6.6□□□□□ -1.35
CSDE1-205ENST00000438362 MAFKO60675 156 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 BMP10O95393 424 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 CORO1AP31146 461 aaKnown RBP6.6□□□□□ -1.35
CSDE1-205ENST00000438362 ANXA11P50995 505 aaKnown RBP6.6□□□□□ -1.35
CSDE1-205ENST00000438362 XKR6Q5GH73 641 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 TJAP1Q5JTD0 557 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 SULT1C3Q6IMI6 304 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 OGFOD2Q6N063 350 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 TPGS1Q6ZTW0 290 aa6.6□□□□□ -1.35
CSDE1-205ENST00000438362 C14orf80Q86SX3 495 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms