RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 OR52K2Q8NGK3 314 aa11.09□□□□□ -0.63
SCN4A-201ENST00000435607 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.09□□□□□ -0.63
SCN4A-201ENST00000435607 SEMA6BQ9H3T3 888 aa11.09□□□□□ -0.63
SCN4A-201ENST00000435607 SCDO00767 359 aa11.09□□□□□ -0.63
SCN4A-201ENST00000435607 FAM153BP0C7A2 387 aa11.09□□□□□ -0.63
SCN4A-201ENST00000435607 LINC00032P0C843 101 aa11.09□□□□□ -0.63
SCN4A-201ENST00000435607 ITPKAP23677 461 aa11.09□□□□□ -0.63
SCN4A-201ENST00000435607 GRM5P41594 1212 aa11.09□□□□□ -0.63
SCN4A-201ENST00000435607 GJA8P48165 433 aa11.09□□□□□ -0.63
SCN4A-201ENST00000435607 INTS5Q6P9B9 1019 aaKnown RBP11.09□□□□□ -0.63
SCN4A-201ENST00000435607 DNAAF5Q86Y56 855 aa11.09□□□□□ -0.63
SCN4A-201ENST00000435607 OR6K2Q8NGY2 324 aa11.09□□□□□ -0.63
SCN4A-201ENST00000435607 PNPLA8Q9NP80 782 aa11.09□□□□□ -0.63
SCN4A-201ENST00000435607 RIMKLBQ9ULI2 386 aa11.09□□□□□ -0.63
SCN4A-201ENST00000435607 BTRCQ9Y297 605 aa11.09□□□□□ -0.63
SCN4A-201ENST00000435607 GMEB1Q9Y692 573 aa11.09□□□□□ -0.63
SCN4A-201ENST00000435607 CNTNAP1P78357 1384 aa11.09□□□□□ -0.63
SCN4A-201ENST00000435607 HRGP04196 525 aa11.09□□□□□ -0.63
SCN4A-201ENST00000435607 MPIP34949 423 aa11.09□□□□□ -0.63
SCN4A-201ENST00000435607 PKNOX1P55347 436 aa11.09□□□□□ -0.63
SCN4A-201ENST00000435607 MAXP61244 160 aa11.09□□□□□ -0.63
SCN4A-201ENST00000435607 ECH1Q13011 328 aa11.09□□□□□ -0.63
SCN4A-201ENST00000435607 FAM131AQ6UXB0 335 aa11.09□□□□□ -0.63
SCN4A-201ENST00000435607 LRRC69Q6ZNQ3 347 aa11.09□□□□□ -0.63
SCN4A-201ENST00000435607 C10orf107Q8IVU9 208 aa11.09□□□□□ -0.63
SCN4A-201ENST00000435607 ING5Q8WYH8 240 aa11.09□□□□□ -0.63
SCN4A-201ENST00000435607 ZBTB45Q96K62 511 aaPredicted RBP11.09□□□□□ -0.63
SCN4A-201ENST00000435607 CAPNS2Q96L46 248 aa11.09□□□□□ -0.63
SCN4A-201ENST00000435607 SERTAD3Q9UJW9 196 aa11.09□□□□□ -0.63
SCN4A-201ENST00000435607 MAN2B2Q9Y2E5 1009 aa11.09□□□□□ -0.63
SCN4A-201ENST00000435607 VWA7Q9Y334 891 aa11.09□□□□□ -0.63
SCN4A-201ENST00000435607 RBM47A0AV96 593 aaKnown RBP11.09□□□□□ -0.63
SCN4A-201ENST00000435607 PSMD9O00233 223 aa11.09□□□□□ -0.63
SCN4A-201ENST00000435607 IRF6O14896 467 aa11.09□□□□□ -0.63
SCN4A-201ENST00000435607 BNIP1Q12981 228 aa11.09□□□□□ -0.63
SCN4A-201ENST00000435607 NAE1Q13564 534 aa11.09□□□□□ -0.63
SCN4A-201ENST00000435607 SEC23AQ15436 765 aa11.09□□□□□ -0.63
SCN4A-201ENST00000435607 MSL3Q8N5Y2 521 aaKnown RBP11.09□□□□□ -0.63
SCN4A-201ENST00000435607 ZBED6CLQ96FA7 236 aaPredicted RBP11.09□□□□□ -0.63
SCN4A-201ENST00000435607 A6NCN8 305 aa11.08□□□□□ -0.63
SCN4A-201ENST00000435607 PI15O43692 258 aa11.08□□□□□ -0.63
SCN4A-201ENST00000435607 NOS1APO75052 506 aaPredicted RBP11.08□□□□□ -0.63
SCN4A-201ENST00000435607 C1QTNF8P60827 252 aa11.08□□□□□ -0.63
SCN4A-201ENST00000435607 CARTPTQ16568 116 aa11.08□□□□□ -0.63
SCN4A-201ENST00000435607 LRRC38Q5VT99 294 aa11.08□□□□□ -0.63
SCN4A-201ENST00000435607 DNAJB7Q7Z6W7 309 aaPredicted RBP11.08□□□□□ -0.63
SCN4A-201ENST00000435607 ZER1Q7Z7L7 766 aa11.08□□□□□ -0.63
SCN4A-201ENST00000435607 CEP97Q8IW35 865 aa11.08□□□□□ -0.63
SCN4A-201ENST00000435607 CRYBG2Q8N1P7 616 aa11.08□□□□□ -0.63
SCN4A-201ENST00000435607 ZNF565Q8N9K5 539 aa11.08□□□□□ -0.63
SCN4A-201ENST00000435607 CSPG4P5Q96PW8 444 aa11.08□□□□□ -0.63
SCN4A-201ENST00000435607 KXD1Q9BQD3 176 aa11.08□□□□□ -0.63
SCN4A-201ENST00000435607 SLC39A3Q9BRY0 314 aa11.08□□□□□ -0.63
SCN4A-201ENST00000435607 BRF2Q9HAW0 419 aa11.08□□□□□ -0.63
SCN4A-201ENST00000435607 ADGRE2Q9UHX3 823 aa11.08□□□□□ -0.63
SCN4A-201ENST00000435607 RAI2Q9Y5P3 530 aa11.08□□□□□ -0.63
SCN4A-201ENST00000435607 AK5Q9Y6K8 562 aa11.08□□□□□ -0.63
SCN4A-201ENST00000435607 A0A075B6Q4 140 aa11.08□□□□□ -0.64
SCN4A-201ENST00000435607 IFNW1P05000 195 aa11.08□□□□□ -0.64
SCN4A-201ENST00000435607 C8GP07360 202 aa11.08□□□□□ -0.64
SCN4A-201ENST00000435607 FAM86B2P0C5J1 330 aa11.08□□□□□ -0.64
SCN4A-201ENST00000435607 PIRTP0C851 137 aa11.08□□□□□ -0.64
SCN4A-201ENST00000435607 FSHRP23945 695 aa11.08□□□□□ -0.64
SCN4A-201ENST00000435607 YBEYP58557 167 aaPredicted RBP11.08□□□□□ -0.64
SCN4A-201ENST00000435607 PITPNAQ00169 270 aa11.08□□□□□ -0.64
SCN4A-201ENST00000435607 C15orf59Q2T9L4 293 aaPredicted RBP11.08□□□□□ -0.64
SCN4A-201ENST00000435607 ZIK1Q3SY52 487 aaPredicted RBP11.08□□□□□ -0.64
SCN4A-201ENST00000435607 ZCCHC23Q6ZST2 131 aa11.08□□□□□ -0.64
SCN4A-201ENST00000435607 SDR16C5Q8N3Y7 309 aa11.08□□□□□ -0.64
SCN4A-201ENST00000435607 OR4C15Q8NGM1 316 aa11.08□□□□□ -0.64
SCN4A-201ENST00000435607 HDAC7Q8WUI4 952 aa11.08□□□□□ -0.64
SCN4A-201ENST00000435607 RNF157Q96PX1 679 aa11.08□□□□□ -0.64
SCN4A-201ENST00000435607 HOPXQ9BPY8 73 aaPredicted RBP11.08□□□□□ -0.64
SCN4A-201ENST00000435607 SNRNP25Q9BV90 132 aaKnown RBP11.08□□□□□ -0.64
SCN4A-201ENST00000435607 CCDC59Q9P031 241 aaKnown RBP11.08□□□□□ -0.64
SCN4A-201ENST00000435607 CNOT6Q9ULM6 557 aaKnown RBP11.08□□□□□ -0.64
SCN4A-201ENST00000435607 A0A1W2PQH9 124 aa11.08□□□□□ -0.64
SCN4A-201ENST00000435607 DUXAA6NLW8 204 aa11.08□□□□□ -0.64
SCN4A-201ENST00000435607 STK16O75716 305 aa11.08□□□□□ -0.64
SCN4A-201ENST00000435607 ACVR2AP27037 513 aa11.08□□□□□ -0.64
SCN4A-201ENST00000435607 FAM110CQ1W6H9 321 aa11.08□□□□□ -0.64
SCN4A-201ENST00000435607 KBTBD2Q8IY47 623 aa11.08□□□□□ -0.64
SCN4A-201ENST00000435607 ZZZ3Q8IYH5 903 aa11.08□□□□□ -0.64
SCN4A-201ENST00000435607 MFSD3Q96ES6 412 aa11.08□□□□□ -0.64
SCN4A-201ENST00000435607 BCO2Q9BYV7 579 aa11.08□□□□□ -0.64
SCN4A-201ENST00000435607 TSPAN1O60635 241 aa11.08□□□□□ -0.64
SCN4A-201ENST00000435607 CYP1A2P05177 515 aa11.08□□□□□ -0.64
SCN4A-201ENST00000435607 MAT2AP31153 395 aaKnown RBP11.08□□□□□ -0.64
SCN4A-201ENST00000435607 AMZ2Q86W34 360 aa11.08□□□□□ -0.64
SCN4A-201ENST00000435607 NIFKQ9BYG3 293 aaKnown RBP11.08□□□□□ -0.64
SCN4A-201ENST00000435607 ARL8BQ9NVJ2 186 aa11.08□□□□□ -0.64
SCN4A-201ENST00000435607 DKKL1Q9UK85 242 aa11.08□□□□□ -0.64
SCN4A-201ENST00000435607 PADI2Q9Y2J8 665 aa11.08□□□□□ -0.64
SCN4A-201ENST00000435607 NEXMIFQ5QGS0 1516 aa11.08□□□□□ -0.64
SCN4A-201ENST00000435607 PLA2R1Q13018 1463 aa11.08□□□□□ -0.64
SCN4A-201ENST00000435607 A0A1B0GVM2 712 aa11.08□□□□□ -0.64
SCN4A-201ENST00000435607 DHRS12A0PJE2 317 aa11.08□□□□□ -0.64
SCN4A-201ENST00000435607 TCAF2A6NFQ2 919 aa11.08□□□□□ -0.64
SCN4A-201ENST00000435607 UBOX5O94941 541 aa11.08□□□□□ -0.64
SCN4A-201ENST00000435607 MT-ND5P03915 603 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms