RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 G6PDP11413 515 aa11.66□□□□□ -0.54
CD44-209ENST00000433892 PSMA3P25788 255 aa11.66□□□□□ -0.54
CD44-209ENST00000433892 VARSP26640 1264 aaKnown RBP11.66□□□□□ -0.54
CD44-209ENST00000433892 CORO1AP31146 461 aaKnown RBP11.66□□□□□ -0.54
CD44-209ENST00000433892 DGKQP52824 942 aa11.66□□□□□ -0.54
CD44-209ENST00000433892 MTPNP58546 118 aa11.66□□□□□ -0.54
CD44-209ENST00000433892 CTBSQ01459 385 aa11.66□□□□□ -0.54
CD44-209ENST00000433892 CAP1Q01518 475 aa11.66□□□□□ -0.54
CD44-209ENST00000433892 TWF1Q12792 350 aa11.66□□□□□ -0.54
CD44-209ENST00000433892 MTA1Q13330 715 aa11.66□□□□□ -0.54
CD44-209ENST00000433892 SELPLGQ14242 412 aa11.66□□□□□ -0.54
CD44-209ENST00000433892 PLCL1Q15111 1095 aa11.66□□□□□ -0.54
CD44-209ENST00000433892 OTUD3Q5T2D3 398 aaPredicted RBP11.66□□□□□ -0.54
CD44-209ENST00000433892 RNF219Q5W0B1 726 aaPredicted RBP11.66□□□□□ -0.54
CD44-209ENST00000433892 HID1Q8IV36 788 aa11.66□□□□□ -0.54
CD44-209ENST00000433892 PAPD5Q8NDF8 572 aaKnown RBP11.66□□□□□ -0.54
CD44-209ENST00000433892 ISOC1Q96CN7 298 aa11.66□□□□□ -0.54
CD44-209ENST00000433892 CCDC97Q96F63 343 aaPredicted RBP11.66□□□□□ -0.54
CD44-209ENST00000433892 ZIC5Q96T25 663 aa11.66□□□□□ -0.54
CD44-209ENST00000433892 TMEM161AQ9NX61 479 aa11.66□□□□□ -0.54
CD44-209ENST00000433892 TUBA8Q9NY65 449 aaPredicted RBP11.66□□□□□ -0.54
CD44-209ENST00000433892 PTBP2Q9UKA9 531 aaKnown RBP11.66□□□□□ -0.54
CD44-209ENST00000433892 CDC14AQ9UNH5 594 aa11.66□□□□□ -0.54
CD44-209ENST00000433892 COMMD10Q9Y6G5 202 aa11.66□□□□□ -0.54
CD44-209ENST00000433892 KANSL1LA0AUZ9 987 aa11.65□□□□□ -0.54
CD44-209ENST00000433892 TRIM64CA6NLI5 447 aa11.65□□□□□ -0.54
CD44-209ENST00000433892 SCAMP3O14828 347 aaKnown RBP11.65□□□□□ -0.54
CD44-209ENST00000433892 COCHO43405 550 aa11.65□□□□□ -0.54
CD44-209ENST00000433892 TBC1D4O60343 1298 aa11.65□□□□□ -0.54
CD44-209ENST00000433892 PRAMEF12O95522 483 aa11.65□□□□□ -0.54
CD44-209ENST00000433892 UMPSP11172 480 aa11.65□□□□□ -0.54
CD44-209ENST00000433892 CST5P28325 142 aaPredicted RBP11.65□□□□□ -0.54
CD44-209ENST00000433892 HTR1EP28566 365 aa11.65□□□□□ -0.54
CD44-209ENST00000433892 CAPGP40121 348 aa11.65□□□□□ -0.54
CD44-209ENST00000433892 PTGER3P43115 390 aa11.65□□□□□ -0.54
CD44-209ENST00000433892 CLCN4P51793 760 aa11.65□□□□□ -0.54
CD44-209ENST00000433892 CLCN7P51798 805 aa11.65□□□□□ -0.54
CD44-209ENST00000433892 NAA20P61599 178 aa11.65□□□□□ -0.54
CD44-209ENST00000433892 ARF5P84085 180 aa11.65□□□□□ -0.54
CD44-209ENST00000433892 DCTN2Q13561 401 aaKnown RBP11.65□□□□□ -0.54
CD44-209ENST00000433892 NR6A1Q15406 480 aa11.65□□□□□ -0.54
CD44-209ENST00000433892 ZBED5Q49AG3 693 aa11.65□□□□□ -0.54
CD44-209ENST00000433892 GLYATQ6IB77 296 aa11.65□□□□□ -0.54
CD44-209ENST00000433892 ABRAXAS1Q6UWZ7 409 aa11.65□□□□□ -0.54
CD44-209ENST00000433892 DLEU7Q6UYE1 221 aa11.65□□□□□ -0.54
CD44-209ENST00000433892 FRA10AC1Q70Z53 315 aa11.65□□□□□ -0.54
CD44-209ENST00000433892 TTC30BQ8N4P2 665 aa11.65□□□□□ -0.54
CD44-209ENST00000433892 DRAXINQ8NBI3 349 aaPredicted RBP11.65□□□□□ -0.54
CD44-209ENST00000433892 ISG20Q96AZ6 181 aaKnown RBP11.65□□□□□ -0.54
CD44-209ENST00000433892 SEZ6LQ9BYH1 1024 aa11.65□□□□□ -0.54
CD44-209ENST00000433892 ACTL8Q9H568 366 aa11.65□□□□□ -0.54
CD44-209ENST00000433892 CD320Q9NPF0 282 aa11.65□□□□□ -0.54
CD44-209ENST00000433892 TMEM88BA6NKF7 163 aa11.65□□□□□ -0.55
CD44-209ENST00000433892 OR7A17O14581 309 aa11.65□□□□□ -0.55
CD44-209ENST00000433892 RSL1D1O76021 490 aaKnown RBP11.65□□□□□ -0.55
CD44-209ENST00000433892 CD160O95971 181 aa11.65□□□□□ -0.55
CD44-209ENST00000433892 ESR1P03372 595 aa11.65□□□□□ -0.55
CD44-209ENST00000433892 C7P10643 843 aa11.65□□□□□ -0.55
CD44-209ENST00000433892 ITGB6P18564 788 aa11.65□□□□□ -0.55
CD44-209ENST00000433892 RPL17P18621 184 aaKnown RBP11.65□□□□□ -0.55
CD44-209ENST00000433892 YAP1P46937 504 aaKnown RBP11.65□□□□□ -0.55
CD44-209ENST00000433892 EMP3P54852 163 aa11.65□□□□□ -0.55
CD44-209ENST00000433892 ABRAXAS2Q15018 415 aa11.65□□□□□ -0.55
CD44-209ENST00000433892 RFTN2Q52LD8 501 aaPredicted RBP11.65□□□□□ -0.55
CD44-209ENST00000433892 TMEM214Q6NUQ4 689 aaKnown RBP11.65□□□□□ -0.55
CD44-209ENST00000433892 CYP20A1Q6UW02 462 aa11.65□□□□□ -0.55
CD44-209ENST00000433892 CHST15Q7LFX5 561 aaPredicted RBP11.65□□□□□ -0.55
CD44-209ENST00000433892 GOLGA7Q7Z5G4 137 aa11.65□□□□□ -0.55
CD44-209ENST00000433892 PATL1Q86TB9 770 aaKnown RBP11.65□□□□□ -0.55
CD44-209ENST00000433892 PROSER1Q86XN7 944 aa11.65□□□□□ -0.55
CD44-209ENST00000433892 DTWD1Q8N5C7 304 aa11.65□□□□□ -0.55
CD44-209ENST00000433892 OR4F6Q8NGB9 312 aa11.65□□□□□ -0.55
CD44-209ENST00000433892 EID2BQ96D98 161 aa11.65□□□□□ -0.55
CD44-209ENST00000433892 NSMCE2Q96MF7 247 aa11.65□□□□□ -0.55
CD44-209ENST00000433892 CASD1Q96PB1 797 aa11.65□□□□□ -0.55
CD44-209ENST00000433892 DCUN1D5Q9BTE7 237 aa11.65□□□□□ -0.55
CD44-209ENST00000433892 NPLQ9BXD5 320 aaPredicted RBP11.65□□□□□ -0.55
CD44-209ENST00000433892 COMMD8Q9NX08 183 aa11.65□□□□□ -0.55
CD44-209ENST00000433892 ZMYM5Q9UJ78 669 aa11.65□□□□□ -0.55
CD44-209ENST00000433892 PCDHB9Q9Y5E1 797 aa11.65□□□□□ -0.55
CD44-209ENST00000433892 A0A1B0GVM2 712 aa11.64□□□□□ -0.55
CD44-209ENST00000433892 ZNF840PA6NDX5 716 aa11.64□□□□□ -0.55
CD44-209ENST00000433892 TRIM64A6NGJ6 449 aa11.64□□□□□ -0.55
CD44-209ENST00000433892 LSM1O15116 133 aaKnown RBP11.64□□□□□ -0.55
CD44-209ENST00000433892 STC2O76061 302 aa11.64□□□□□ -0.55
CD44-209ENST00000433892 GUCA1CO95843 209 aa11.64□□□□□ -0.55
CD44-209ENST00000433892 PCNAP12004 261 aa11.64□□□□□ -0.55
CD44-209ENST00000433892 CTPS1P17812 591 aa11.64□□□□□ -0.55
CD44-209ENST00000433892 CD9P21926 228 aa11.64□□□□□ -0.55
CD44-209ENST00000433892 RANBP1P43487 201 aa11.64□□□□□ -0.55
CD44-209ENST00000433892 STT3AP46977 705 aa11.64□□□□□ -0.55
CD44-209ENST00000433892 GALK1P51570 392 aa11.64□□□□□ -0.55
CD44-209ENST00000433892 PMS2P3Q13401 168 aa11.64□□□□□ -0.55
CD44-209ENST00000433892 AP5B1Q2VPB7 878 aa11.64□□□□□ -0.55
CD44-209ENST00000433892 ZIK1Q3SY52 487 aaPredicted RBP11.64□□□□□ -0.55
CD44-209ENST00000433892 AARS2Q5JTZ9 985 aaKnown RBP11.64□□□□□ -0.55
CD44-209ENST00000433892 RNF180Q86T96 592 aa11.64□□□□□ -0.55
CD44-209ENST00000433892 GPR180Q86V85 440 aa11.64□□□□□ -0.55
CD44-209ENST00000433892 FAM126BQ8IXS8 530 aa11.64□□□□□ -0.55
CD44-209ENST00000433892 ADAMTS16Q8TE57 1224 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms