RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 C21orf33P30042 268 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P27-201ENST00000431429 SSTR2P30874 369 aa3.07□□□□□ -1.92
HMGB1P27-201ENST00000431429 GP5P40197 560 aa3.07□□□□□ -1.92
HMGB1P27-201ENST00000431429 CCR10P46092 362 aa3.07□□□□□ -1.92
HMGB1P27-201ENST00000431429 GLUD2P49448 558 aa3.07□□□□□ -1.92
HMGB1P27-201ENST00000431429 RAB28P51157 221 aa3.07□□□□□ -1.92
HMGB1P27-201ENST00000431429 PPP2R2BQ00005 443 aa3.07□□□□□ -1.92
HMGB1P27-201ENST00000431429 CDK3Q00526 305 aa3.07□□□□□ -1.92
HMGB1P27-201ENST00000431429 PNRC1Q12796 327 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P27-201ENST00000431429 ZNF155Q12901 538 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P27-201ENST00000431429 BFSP1Q12934 665 aa3.07□□□□□ -1.92
HMGB1P27-201ENST00000431429 PPIGQ13427 754 aaKnown RBP eCLIP3.07□□□□□ -1.92
HMGB1P27-201ENST00000431429 ZNF273Q14593 569 aa3.07□□□□□ -1.92
HMGB1P27-201ENST00000431429 PTPRCAPQ14761 206 aa3.07□□□□□ -1.92
HMGB1P27-201ENST00000431429 NR1D2Q14995 579 aa3.07□□□□□ -1.92
HMGB1P27-201ENST00000431429 PLCB4Q15147 1175 aa3.07□□□□□ -1.92
HMGB1P27-201ENST00000431429 VWC2Q2TAL6 325 aa3.07□□□□□ -1.92
HMGB1P27-201ENST00000431429 KCNT1Q5JUK3 1230 aa3.07□□□□□ -1.92
HMGB1P27-201ENST00000431429 SLC10A5Q5PT55 438 aa3.07□□□□□ -1.92
HMGB1P27-201ENST00000431429 TYW3Q6IPR3 259 aaKnown RBP3.07□□□□□ -1.92
HMGB1P27-201ENST00000431429 ERN2Q76MJ5 926 aaKnown RBP3.07□□□□□ -1.92
HMGB1P27-201ENST00000431429 PIM3Q86V86 326 aa3.07□□□□□ -1.92
HMGB1P27-201ENST00000431429 IQCHQ86VS3 1027 aa3.07□□□□□ -1.92
HMGB1P27-201ENST00000431429 AFAP1Q8N556 730 aa3.07□□□□□ -1.92
HMGB1P27-201ENST00000431429 KIF18AQ8NI77 898 aa3.07□□□□□ -1.92
HMGB1P27-201ENST00000431429 TEKT4Q8WW24 435 aa3.07□□□□□ -1.92
HMGB1P27-201ENST00000431429 SLC44A1Q8WWI5 657 aa3.07□□□□□ -1.92
HMGB1P27-201ENST00000431429 FAM162AQ96A26 154 aa3.07□□□□□ -1.92
HMGB1P27-201ENST00000431429 ZNF778Q96MU6 729 aa3.07□□□□□ -1.92
HMGB1P27-201ENST00000431429 ZNF48Q96MX3 618 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P27-201ENST00000431429 MS4A10Q96PG2 267 aa3.07□□□□□ -1.92
HMGB1P27-201ENST00000431429 SMC6Q96SB8 1091 aa3.07□□□□□ -1.92
HMGB1P27-201ENST00000431429 NUP85Q9BW27 656 aa3.07□□□□□ -1.92
HMGB1P27-201ENST00000431429 MOV10L1Q9BXT6 1211 aaKnown RBP3.07□□□□□ -1.92
HMGB1P27-201ENST00000431429 FAM129AQ9BZQ8 928 aa3.07□□□□□ -1.92
HMGB1P27-201ENST00000431429 RBM38Q9H0Z9 239 aaKnown RBP3.07□□□□□ -1.92
HMGB1P27-201ENST00000431429 IL25Q9H293 177 aa3.07□□□□□ -1.92
HMGB1P27-201ENST00000431429 CNOT10Q9H9A5 744 aaKnown RBP3.07□□□□□ -1.92
HMGB1P27-201ENST00000431429 KLHL9Q9P2J3 617 aa3.07□□□□□ -1.92
HMGB1P27-201ENST00000431429 FBXL2Q9UKC9 423 aa3.07□□□□□ -1.92
HMGB1P27-201ENST00000431429 PCDHA7Q9UN72 937 aa3.07□□□□□ -1.92
HMGB1P27-201ENST00000431429 LOXL2Q9Y4K0 774 aa3.07□□□□□ -1.92
HMGB1P27-201ENST00000431429 PTPRCP08575 1304 aa3.07□□□□□ -1.92
HMGB1P27-201ENST00000431429 SOS1Q07889 1333 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P27-201ENST00000431429 PRAG1Q86YV5 1406 aa3.07□□□□□ -1.92
HMGB1P27-201ENST00000431429 hDV102S1A0JD36 115 aa3.06□□□□□ -1.92
HMGB1P27-201ENST00000431429 FAM170AA1A519 330 aa3.06□□□□□ -1.92
HMGB1P27-201ENST00000431429 C5orf60A6NFR6 353 aa3.06□□□□□ -1.92
HMGB1P27-201ENST00000431429 ZNF587BE7ETH6 402 aa3.06□□□□□ -1.92
HMGB1P27-201ENST00000431429 H0YIN7 160 aa3.06□□□□□ -1.92
HMGB1P27-201ENST00000431429 TRIM77I1YAP6 450 aa3.06□□□□□ -1.92
HMGB1P27-201ENST00000431429 TMEM189-UBE2V1I3L0A0 370 aa3.06□□□□□ -1.92
HMGB1P27-201ENST00000431429 PSMD14O00487 310 aa3.06□□□□□ -1.92
HMGB1P27-201ENST00000431429 HS3ST1O14792 307 aa3.06□□□□□ -1.92
HMGB1P27-201ENST00000431429 SYNJ1O43426 1573 aa3.06□□□□□ -1.92
HMGB1P27-201ENST00000431429 MED24O75448 989 aa3.06□□□□□ -1.92
HMGB1P27-201ENST00000431429 SOGA1O94964 1423 aa3.06□□□□□ -1.92
HMGB1P27-201ENST00000431429 PFKFB1P16118 471 aa3.06□□□□□ -1.92
HMGB1P27-201ENST00000431429 ACHEP22303 614 aa3.06□□□□□ -1.92
HMGB1P27-201ENST00000431429 CORO1AP31146 461 aaKnown RBP3.06□□□□□ -1.92
HMGB1P27-201ENST00000431429 ABCG1P45844 678 aa3.06□□□□□ -1.92
HMGB1P27-201ENST00000431429 NPY4RP50391 375 aa3.06□□□□□ -1.92
HMGB1P27-201ENST00000431429 POLGP54098 1239 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P27-201ENST00000431429 TERF1P54274 439 aa3.06□□□□□ -1.92
HMGB1P27-201ENST00000431429 PPARDQ03181 441 aa3.06□□□□□ -1.92
HMGB1P27-201ENST00000431429 DSC1Q08554 894 aa3.06□□□□□ -1.92
HMGB1P27-201ENST00000431429 RALGDSQ12967 914 aa3.06□□□□□ -1.92
HMGB1P27-201ENST00000431429 UBE2V1Q13404 147 aa3.06□□□□□ -1.92
HMGB1P27-201ENST00000431429 CAMK2DQ13557 499 aa3.06□□□□□ -1.92
HMGB1P27-201ENST00000431429 CCDC142Q17RM4 750 aa3.06□□□□□ -1.92
HMGB1P27-201ENST00000431429 LETM2Q2VYF4 491 aa3.06□□□□□ -1.92
HMGB1P27-201ENST00000431429 RNASEH2BQ5TBB1 312 aaKnown RBP3.06□□□□□ -1.92
HMGB1P27-201ENST00000431429 GRTP1Q5TC63 336 aa3.06□□□□□ -1.92
HMGB1P27-201ENST00000431429 ZDHHC20Q5W0Z9 365 aa3.06□□□□□ -1.92
HMGB1P27-201ENST00000431429 FAM122CQ6P4D5 195 aa3.06□□□□□ -1.92
HMGB1P27-201ENST00000431429 WDR73Q6P4I2 378 aa3.06□□□□□ -1.92
HMGB1P27-201ENST00000431429 FIGLAQ6QHK4 219 aa3.06□□□□□ -1.92
HMGB1P27-201ENST00000431429 LINGO4Q6UY18 593 aa3.06□□□□□ -1.92
HMGB1P27-201ENST00000431429 FAM47EQ6ZV65 393 aa3.06□□□□□ -1.92
HMGB1P27-201ENST00000431429 CENPVQ7Z7K6 275 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P27-201ENST00000431429 OR8H3Q8N146 312 aa3.06□□□□□ -1.92
HMGB1P27-201ENST00000431429 PGBD5Q8N414 524 aa3.06□□□□□ -1.92
HMGB1P27-201ENST00000431429 FBXO39Q8N4B4 442 aa3.06□□□□□ -1.92
HMGB1P27-201ENST00000431429 SLC5A8Q8N695 610 aa3.06□□□□□ -1.92
HMGB1P27-201ENST00000431429 OR14A16Q8NHC5 309 aa3.06□□□□□ -1.92
HMGB1P27-201ENST00000431429 MOSPD2Q8NHP6 518 aa3.06□□□□□ -1.92
HMGB1P27-201ENST00000431429 WASF1Q92558 559 aa3.06□□□□□ -1.92
HMGB1P27-201ENST00000431429 ABTB1Q969K4 478 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P27-201ENST00000431429 PHF21BQ96EK2 531 aa3.06□□□□□ -1.92
HMGB1P27-201ENST00000431429 SCMH1Q96GD3 660 aa3.06□□□□□ -1.92
HMGB1P27-201ENST00000431429 MUS81Q96NY9 551 aa3.06□□□□□ -1.92
HMGB1P27-201ENST00000431429 RAB3IPQ96QF0 476 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P27-201ENST00000431429 OR6C1Q96RD1 312 aa3.06□□□□□ -1.92
HMGB1P27-201ENST00000431429 CMKLR1Q99788 373 aa3.06□□□□□ -1.92
HMGB1P27-201ENST00000431429 KRTAP4-7Q9BYR0 210 aa3.06□□□□□ -1.92
HMGB1P27-201ENST00000431429 SLA2Q9H6Q3 261 aa3.06□□□□□ -1.92
HMGB1P27-201ENST00000431429 ZWILCHQ9H900 591 aa3.06□□□□□ -1.92
HMGB1P27-201ENST00000431429 CHMP1AQ9HD42 196 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P27-201ENST00000431429 CHCHD3Q9NX63 227 aaKnown RBP3.06□□□□□ -1.92
HMGB1P27-201ENST00000431429 RHCGQ9UBD6 479 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms