RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 ZUFSPQ96AP4 578 aa12.49□□□□□ -0.41
CPNE4-201ENST00000429747 ITCHQ96J02 903 aa12.49□□□□□ -0.41
CPNE4-201ENST00000429747 SMURF2Q9HAU4 748 aa12.49□□□□□ -0.41
CPNE4-201ENST00000429747 RPS6KA6Q9UK32 745 aa12.49□□□□□ -0.41
CPNE4-201ENST00000429747 hCG_2039718K7EN88 272 aa12.48□□□□□ -0.41
CPNE4-201ENST00000429747 TRIM24O15164 1050 aa12.48□□□□□ -0.41
CPNE4-201ENST00000429747 INSIG1O15503 277 aa12.48□□□□□ -0.41
CPNE4-201ENST00000429747 NDUFS2O75306 463 aa12.48□□□□□ -0.41
CPNE4-201ENST00000429747 RRM2P31350 389 aa12.48□□□□□ -0.41
CPNE4-201ENST00000429747 LEPRP48357 1165 aaKnown RBP12.48□□□□□ -0.41
CPNE4-201ENST00000429747 GPR15P49685 360 aa12.48□□□□□ -0.41
CPNE4-201ENST00000429747 SH3BP2P78314 561 aa12.48□□□□□ -0.41
CPNE4-201ENST00000429747 ZNF33AQ06730 810 aa12.48□□□□□ -0.41
CPNE4-201ENST00000429747 RAB39AQ14964 217 aa12.48□□□□□ -0.41
CPNE4-201ENST00000429747 INAQ16352 499 aa12.48□□□□□ -0.41
CPNE4-201ENST00000429747 HIPK1Q86Z02 1210 aa12.48□□□□□ -0.41
CPNE4-201ENST00000429747 GPR156Q8NFN8 814 aa12.48□□□□□ -0.41
CPNE4-201ENST00000429747 PADI4Q9UM07 663 aa12.48□□□□□ -0.41
CPNE4-201ENST00000429747 TRIM17Q9Y577 477 aa12.48□□□□□ -0.41
CPNE4-201ENST00000429747 BOLA2-SMG1P6H3BVE0 249 aa12.48□□□□□ -0.41
CPNE4-201ENST00000429747 ALDH1A1P00352 501 aa12.48□□□□□ -0.41
CPNE4-201ENST00000429747 C1RP00736 705 aa12.48□□□□□ -0.41
CPNE4-201ENST00000429747 CDH1P12830 882 aa12.48□□□□□ -0.41
CPNE4-201ENST00000429747 CCL14Q16627 93 aa12.48□□□□□ -0.41
CPNE4-201ENST00000429747 HIST2H2ACQ16777 129 aaPredicted RBP12.48□□□□□ -0.41
CPNE4-201ENST00000429747 FGD3Q5JSP0 725 aa12.48□□□□□ -0.41
CPNE4-201ENST00000429747 HIST2H2AA3Q6FI13 130 aa12.48□□□□□ -0.41
CPNE4-201ENST00000429747 TMC5Q6UXY8 1006 aa12.48□□□□□ -0.41
CPNE4-201ENST00000429747 PCSK9Q8NBP7 692 aaKnown RBP12.48□□□□□ -0.41
CPNE4-201ENST00000429747 NPLOC4Q8TAT6 608 aa12.48□□□□□ -0.41
CPNE4-201ENST00000429747 TAMM41Q96BW9 452 aa12.48□□□□□ -0.41
CPNE4-201ENST00000429747 SMOC2Q9H3U7 446 aa12.48□□□□□ -0.41
CPNE4-201ENST00000429747 LMCD1Q9NZU5 365 aa12.48□□□□□ -0.41
CPNE4-201ENST00000429747 NHSL1Q5SYE7 1610 aa12.48□□□□□ -0.41
CPNE4-201ENST00000429747 PRSS51A0A1B0GVH4 220 aa12.48□□□□□ -0.41
CPNE4-201ENST00000429747 H3BN98 237 aa12.48□□□□□ -0.41
CPNE4-201ENST00000429747 STK16O75716 305 aa12.48□□□□□ -0.41
CPNE4-201ENST00000429747 F2P00734 622 aa12.48□□□□□ -0.41
CPNE4-201ENST00000429747 SERPINA1P01009 418 aa12.48□□□□□ -0.41
CPNE4-201ENST00000429747 G6PDP11413 515 aa12.48□□□□□ -0.41
CPNE4-201ENST00000429747 CDK4P11802 303 aa12.48□□□□□ -0.41
CPNE4-201ENST00000429747 COL6A1P12109 1028 aa12.48□□□□□ -0.41
CPNE4-201ENST00000429747 ITPKAP23677 461 aa12.48□□□□□ -0.41
CPNE4-201ENST00000429747 WEE1P30291 646 aa12.48□□□□□ -0.41
CPNE4-201ENST00000429747 FCGRTP55899 365 aa12.48□□□□□ -0.41
CPNE4-201ENST00000429747 KRR1Q13601 381 aaKnown RBP12.48□□□□□ -0.41
CPNE4-201ENST00000429747 MEP1AQ16819 746 aa12.48□□□□□ -0.41
CPNE4-201ENST00000429747 HSF5Q4G112 596 aaPredicted RBP12.48□□□□□ -0.41
CPNE4-201ENST00000429747 NANOGP8Q6NSW7 305 aa12.48□□□□□ -0.41
CPNE4-201ENST00000429747 CMTR2Q8IYT2 770 aaKnown RBP12.48□□□□□ -0.41
CPNE4-201ENST00000429747 EEF1AKMT1Q8WVE0 214 aa12.48□□□□□ -0.41
CPNE4-201ENST00000429747 MRPS31Q92665 395 aaKnown RBP12.48□□□□□ -0.41
CPNE4-201ENST00000429747 SLC45A3Q96JT2 553 aa12.48□□□□□ -0.41
CPNE4-201ENST00000429747 NANOGQ9H9S0 305 aa12.48□□□□□ -0.41
CPNE4-201ENST00000429747 GMPR2Q9P2T1 348 aaKnown RBP12.48□□□□□ -0.41
CPNE4-201ENST00000429747 DNAJB9Q9UBS3 223 aa12.48□□□□□ -0.41
CPNE4-201ENST00000429747 TLR6Q9Y2C9 796 aa12.48□□□□□ -0.41
CPNE4-201ENST00000429747 HEMK1Q9Y5R4 338 aaPredicted RBP12.48□□□□□ -0.41
CPNE4-201ENST00000429747 ZFP37Q9Y6Q3 630 aaPredicted RBP12.48□□□□□ -0.41
CPNE4-201ENST00000429747 C7orf72A4D263 438 aa12.48□□□□□ -0.41
CPNE4-201ENST00000429747 GNAO1P09471 354 aa12.48□□□□□ -0.41
CPNE4-201ENST00000429747 CCDC159P0C7I6 412 aa12.48□□□□□ -0.41
CPNE4-201ENST00000429747 MYCLP1P12525 358 aaPredicted RBP12.48□□□□□ -0.41
CPNE4-201ENST00000429747 CAPN3P20807 821 aa12.48□□□□□ -0.41
CPNE4-201ENST00000429747 FMO3P31513 532 aa12.48□□□□□ -0.41
CPNE4-201ENST00000429747 TRIM32Q13049 653 aa12.48□□□□□ -0.41
CPNE4-201ENST00000429747 ZC3H12BQ5HYM0 836 aaKnown RBP12.48□□□□□ -0.41
CPNE4-201ENST00000429747 P2RY8Q86VZ1 359 aa12.48□□□□□ -0.41
CPNE4-201ENST00000429747 AMBNQ9NP70 447 aa12.48□□□□□ -0.41
CPNE4-201ENST00000429747 POLR3BQ9NW08 1133 aaPredicted RBP12.48□□□□□ -0.41
CPNE4-201ENST00000429747 NUDT4Q9NZJ9 180 aa12.48□□□□□ -0.41
CPNE4-201ENST00000429747 PPP6CO00743 305 aa12.47□□□□□ -0.41
CPNE4-201ENST00000429747 RGS10O43665 173 aa12.47□□□□□ -0.41
CPNE4-201ENST00000429747 PRAMEF1O95521 474 aa12.47□□□□□ -0.41
CPNE4-201ENST00000429747 S1PR4O95977 384 aa12.47□□□□□ -0.41
CPNE4-201ENST00000429747 SLC5A2P31639 672 aa12.47□□□□□ -0.41
CPNE4-201ENST00000429747 ARRB2P32121 409 aa12.47□□□□□ -0.41
CPNE4-201ENST00000429747 TUFMP49411 452 aaKnown RBP12.47□□□□□ -0.41
CPNE4-201ENST00000429747 SMAD3P84022 425 aaKnown RBP12.47□□□□□ -0.41
CPNE4-201ENST00000429747 ZNF829Q3KNS6 432 aaPredicted RBP12.47□□□□□ -0.41
CPNE4-201ENST00000429747 SMYD1Q8NB12 490 aa12.47□□□□□ -0.41
CPNE4-201ENST00000429747 SMG8Q8ND04 991 aaKnown RBP12.47□□□□□ -0.41
CPNE4-201ENST00000429747 TMEM159Q96B96 161 aa12.47□□□□□ -0.41
CPNE4-201ENST00000429747 IL12RB2Q99665 862 aa12.47□□□□□ -0.41
CPNE4-201ENST00000429747 C2orf49Q9BVC5 232 aaPredicted RBP12.47□□□□□ -0.41
CPNE4-201ENST00000429747 INTS7Q9NVH2 962 aaKnown RBP12.47□□□□□ -0.41
CPNE4-201ENST00000429747 PSME2Q9UL46 239 aa12.47□□□□□ -0.41
CPNE4-201ENST00000429747 PTGESO14684 152 aa12.47□□□□□ -0.41
CPNE4-201ENST00000429747 GPR32O75388 356 aa12.47□□□□□ -0.41
CPNE4-201ENST00000429747 GABRB3P28472 473 aa12.47□□□□□ -0.41
CPNE4-201ENST00000429747 GRIA2P42262 883 aa12.47□□□□□ -0.41
CPNE4-201ENST00000429747 SEMG2Q02383 582 aa12.47□□□□□ -0.41
CPNE4-201ENST00000429747 PIGFQ07326 219 aa12.47□□□□□ -0.41
CPNE4-201ENST00000429747 MTA1Q13330 715 aa12.47□□□□□ -0.41
CPNE4-201ENST00000429747 ARMCX4Q5H9R4 360 aa12.47□□□□□ -0.41
CPNE4-201ENST00000429747 SMYD5Q6GMV2 418 aa12.47□□□□□ -0.41
CPNE4-201ENST00000429747 ZDHHC21Q8IVQ6 265 aa12.47□□□□□ -0.41
CPNE4-201ENST00000429747 ZC3H7AQ8IWR0 971 aaKnown RBP12.47□□□□□ -0.41
CPNE4-201ENST00000429747 NELL1Q92832 810 aa12.47□□□□□ -0.41
CPNE4-201ENST00000429747 KIAA1191Q96A73 305 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms