RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 KCTD11Q693B1 232 aa15.92■□□□□ 0.14
C9orf3-206ENST00000428313 SDE2Q6IQ49 451 aa15.92■□□□□ 0.14
C9orf3-206ENST00000428313 DPY19L3Q6ZPD9 716 aa15.92■□□□□ 0.14
C9orf3-206ENST00000428313 SPATA6LQ8N4H0 392 aa15.92■□□□□ 0.14
C9orf3-206ENST00000428313 UBA3Q8TBC4 463 aa15.92■□□□□ 0.14
C9orf3-206ENST00000428313 MASTLQ96GX5 879 aa15.92■□□□□ 0.14
C9orf3-206ENST00000428313 LEF1Q9UJU2 399 aaPredicted RBP15.92■□□□□ 0.14
C9orf3-206ENST00000428313 ERVW-1Q9UQF0 538 aa15.92■□□□□ 0.14
C9orf3-206ENST00000428313 OGTO15294 1046 aa15.91■□□□□ 0.14
C9orf3-206ENST00000428313 HS6ST1O60243 411 aa15.91■□□□□ 0.14
C9orf3-206ENST00000428313 EDN1P05305 212 aa15.91■□□□□ 0.14
C9orf3-206ENST00000428313 DBTP11182 482 aaKnown RBP15.91■□□□□ 0.14
C9orf3-206ENST00000428313 LBPP18428 481 aa15.91■□□□□ 0.14
C9orf3-206ENST00000428313 KCNA5P22460 613 aa15.91■□□□□ 0.14
C9orf3-206ENST00000428313 KCNK10P57789 538 aa15.91■□□□□ 0.14
C9orf3-206ENST00000428313 JAG1P78504 1218 aa15.91■□□□□ 0.14
C9orf3-206ENST00000428313 SLC6A3Q01959 620 aa15.91■□□□□ 0.14
C9orf3-206ENST00000428313 RCAN2Q14206 197 aa15.91■□□□□ 0.14
C9orf3-206ENST00000428313 RPS6KA2Q15349 733 aa15.91■□□□□ 0.14
C9orf3-206ENST00000428313 EML3Q32P44 896 aa15.91■□□□□ 0.14
C9orf3-206ENST00000428313 CERCAMQ5T4B2 595 aa15.91■□□□□ 0.14
C9orf3-206ENST00000428313 TIGD3Q6B0B8 471 aa15.91■□□□□ 0.14
C9orf3-206ENST00000428313 ZPBP2Q6X784 338 aa15.91■□□□□ 0.14
C9orf3-206ENST00000428313 PID1Q7Z2X4 250 aa15.91■□□□□ 0.14
C9orf3-206ENST00000428313 AADATQ8N5Z0 425 aa15.91■□□□□ 0.14
C9orf3-206ENST00000428313 GALNT11Q8NCW6 608 aa15.91■□□□□ 0.14
C9orf3-206ENST00000428313 OR5K1Q8NHB7 308 aa15.91■□□□□ 0.14
C9orf3-206ENST00000428313 IPCEF1Q8WWN9 437 aaPredicted RBP15.91■□□□□ 0.14
C9orf3-206ENST00000428313 DPP3Q9NY33 737 aa15.91■□□□□ 0.14
C9orf3-206ENST00000428313 FNDC1Q4ZHG4 1894 aaPredicted RBP15.91■□□□□ 0.14
C9orf3-206ENST00000428313 ASPDHA6ND91 283 aa15.91■□□□□ 0.14
C9orf3-206ENST00000428313 KPNA6O60684 536 aa15.91■□□□□ 0.14
C9orf3-206ENST00000428313 DNAJB2P25686 324 aa15.91■□□□□ 0.14
C9orf3-206ENST00000428313 NMBRP28336 390 aa15.91■□□□□ 0.14
C9orf3-206ENST00000428313 FMO3P31513 532 aa15.91■□□□□ 0.14
C9orf3-206ENST00000428313 UQCRC1P31930 480 aa15.91■□□□□ 0.14
C9orf3-206ENST00000428313 ARL4AP40617 200 aa15.91■□□□□ 0.14
C9orf3-206ENST00000428313 CTSKP43235 329 aa15.91■□□□□ 0.14
C9orf3-206ENST00000428313 PPP3CCP48454 512 aa15.91■□□□□ 0.14
C9orf3-206ENST00000428313 APLP1P51693 650 aa15.91■□□□□ 0.14
C9orf3-206ENST00000428313 B2MP61769 119 aa15.91■□□□□ 0.14
C9orf3-206ENST00000428313 FKBP1AP62942 108 aaKnown RBP15.91■□□□□ 0.14
C9orf3-206ENST00000428313 TCP10Q12799 353 aa15.91■□□□□ 0.14
C9orf3-206ENST00000428313 RAPSNQ13702 412 aa15.91■□□□□ 0.14
C9orf3-206ENST00000428313 FUT11Q495W5 492 aa15.91■□□□□ 0.14
C9orf3-206ENST00000428313 MFSD6LQ8IWD5 586 aa15.91■□□□□ 0.14
C9orf3-206ENST00000428313 FLCNQ8NFG4 579 aa15.91■□□□□ 0.14
C9orf3-206ENST00000428313 NSUN6Q8TEA1 469 aaKnown RBP15.91■□□□□ 0.14
C9orf3-206ENST00000428313 NCLNQ969V3 563 aa15.91■□□□□ 0.14
C9orf3-206ENST00000428313 SH3KBP1Q96B97 665 aa15.91■□□□□ 0.14
C9orf3-206ENST00000428313 L3HYPDHQ96EM0 354 aa15.91■□□□□ 0.14
C9orf3-206ENST00000428313 PORCNQ9H237 461 aa15.91■□□□□ 0.14
C9orf3-206ENST00000428313 NIPAL2Q9H841 368 aa15.91■□□□□ 0.14
C9orf3-206ENST00000428313 EXD2Q9NVH0 621 aa15.91■□□□□ 0.14
C9orf3-206ENST00000428313 GRXCR2A6NFK2 248 aa15.9■□□□□ 0.14
C9orf3-206ENST00000428313 PGLSO95336 258 aa15.9■□□□□ 0.14
C9orf3-206ENST00000428313 CST1P01037 141 aa15.9■□□□□ 0.14
C9orf3-206ENST00000428313 SERPINF2P08697 491 aa15.9■□□□□ 0.14
C9orf3-206ENST00000428313 HOXC6P09630 235 aa15.9■□□□□ 0.14
C9orf3-206ENST00000428313 HOXD8P13378 290 aaPredicted RBP15.9■□□□□ 0.14
C9orf3-206ENST00000428313 CFL1P23528 166 aaKnown RBP15.9■□□□□ 0.14
C9orf3-206ENST00000428313 TALDO1P37837 337 aa15.9■□□□□ 0.14
C9orf3-206ENST00000428313 CDH8P55286 799 aa15.9■□□□□ 0.14
C9orf3-206ENST00000428313 NKX3-2P78367 333 aa15.9■□□□□ 0.14
C9orf3-206ENST00000428313 SLAMF1Q13291 335 aa15.9■□□□□ 0.14
C9orf3-206ENST00000428313 AGAP9Q5VTM2 703 aa15.9■□□□□ 0.14
C9orf3-206ENST00000428313 PAF1Q8N7H5 531 aa15.9■□□□□ 0.14
C9orf3-206ENST00000428313 ZMIZ2Q8NF64 920 aa15.9■□□□□ 0.14
C9orf3-206ENST00000428313 OR10T2Q8NGX3 314 aa15.9■□□□□ 0.14
C9orf3-206ENST00000428313 CENPIQ92674 756 aaPredicted RBP15.9■□□□□ 0.14
C9orf3-206ENST00000428313 KHSRPQ92945 711 aaKnown RBP eCLIP15.9■□□□□ 0.142e-6■■■□□ 16
C9orf3-206ENST00000428313 ISG20Q96AZ6 181 aaKnown RBP15.9■□□□□ 0.14
C9orf3-206ENST00000428313 TMEM74Q96NL1 305 aa15.9■□□□□ 0.14
C9orf3-206ENST00000428313 NEDD4LQ96PU5 975 aa15.9■□□□□ 0.14
C9orf3-206ENST00000428313 FYTTD1Q96QD9 318 aaKnown RBP15.9■□□□□ 0.14
C9orf3-206ENST00000428313 C11orf84Q9BUA3 381 aaPredicted RBP15.9■□□□□ 0.14
C9orf3-206ENST00000428313 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.9■□□□□ 0.142e-7■■■□□ 18.5
C9orf3-206ENST00000428313 GLTPQ9NZD2 209 aa15.9■□□□□ 0.14
C9orf3-206ENST00000428313 FAM198AQ9UFP1 575 aa15.9■□□□□ 0.14
C9orf3-206ENST00000428313 TRMT6Q9UJA5 497 aaKnown RBP15.9■□□□□ 0.14
C9orf3-206ENST00000428313 RNF6Q9Y252 685 aa15.9■□□□□ 0.14
C9orf3-206ENST00000428313 TMX2Q9Y320 296 aa15.9■□□□□ 0.14
C9orf3-206ENST00000428313 PCDHB14Q9Y5E9 798 aa15.9■□□□□ 0.14
C9orf3-206ENST00000428313 COL2A1P02458 1487 aaPredicted RBP15.9■□□□□ 0.14
C9orf3-206ENST00000428313 EPN2O95208 641 aa15.89■□□□□ 0.13
C9orf3-206ENST00000428313 FTH1P02794 183 aa15.89■□□□□ 0.13
C9orf3-206ENST00000428313 FGF4P08620 206 aa15.89■□□□□ 0.13
C9orf3-206ENST00000428313 PSKH1P11801 424 aa15.89■□□□□ 0.13
C9orf3-206ENST00000428313 GOT1P17174 413 aa15.89■□□□□ 0.13
C9orf3-206ENST00000428313 GGT1P19440 569 aa15.89■□□□□ 0.13
C9orf3-206ENST00000428313 RFX2P48378 723 aa15.89■□□□□ 0.13
C9orf3-206ENST00000428313 POU4F1Q01851 419 aa15.89■□□□□ 0.13
C9orf3-206ENST00000428313 PRKCEQ02156 737 aa15.89■□□□□ 0.13
C9orf3-206ENST00000428313 KEAP1Q14145 624 aa15.89■□□□□ 0.13
C9orf3-206ENST00000428313 EFR3AQ14156 821 aa15.89■□□□□ 0.13
C9orf3-206ENST00000428313 JADE1Q6IE81 842 aa15.89■□□□□ 0.13
C9orf3-206ENST00000428313 LCLAT1Q6UWP7 414 aa15.89■□□□□ 0.13
C9orf3-206ENST00000428313 RPS27LQ71UM5 84 aaKnown RBP15.89■□□□□ 0.13
C9orf3-206ENST00000428313 EID3Q8N140 333 aa15.89■□□□□ 0.13
C9orf3-206ENST00000428313 DTWD1Q8N5C7 304 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms