RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 CLHC1Q8NHS4 586 aa13.72□□□□□ -0.21
RPL28-202ENST00000426763 STRA6Q9BX79 667 aa13.72□□□□□ -0.21
RPL28-202ENST00000426763 ROGDIQ9GZN7 287 aa13.72□□□□□ -0.21
RPL28-202ENST00000426763 DNAJC28Q9NX36 388 aa13.72□□□□□ -0.21
RPL28-202ENST00000426763 EIF2B4Q9UI10 523 aaKnown RBP13.72□□□□□ -0.21
RPL28-202ENST00000426763 SLC28A2O43868 658 aa13.71□□□□□ -0.21
RPL28-202ENST00000426763 SMNDC1O75940 238 aaKnown RBP eCLIP13.71□□□□□ -0.21
RPL28-202ENST00000426763 GNAZP19086 355 aa13.71□□□□□ -0.21
RPL28-202ENST00000426763 TNK2Q07912 1038 aa13.71□□□□□ -0.21
RPL28-202ENST00000426763 C2orf80Q0P641 193 aa13.71□□□□□ -0.21
RPL28-202ENST00000426763 OASLQ15646 514 aaKnown RBP13.71□□□□□ -0.21
RPL28-202ENST00000426763 PLEKHG6Q3KR16 790 aa13.71□□□□□ -0.21
RPL28-202ENST00000426763 XKR4Q5GH76 650 aa13.71□□□□□ -0.21
RPL28-202ENST00000426763 C1orf220Q5T0J3 134 aa13.71□□□□□ -0.21
RPL28-202ENST00000426763 LRRTM4Q86VH4 590 aa13.71□□□□□ -0.21
RPL28-202ENST00000426763 NECTIN4Q96NY8 510 aa13.71□□□□□ -0.21
RPL28-202ENST00000426763 TUBGCP5Q96RT8 1024 aa13.71□□□□□ -0.21
RPL28-202ENST00000426763 P2RY13Q9BPV8 354 aa13.71□□□□□ -0.21
RPL28-202ENST00000426763 RERGLQ9H628 205 aa13.71□□□□□ -0.21
RPL28-202ENST00000426763 ELOVL2Q9NXB9 296 aa13.71□□□□□ -0.21
RPL28-202ENST00000426763 OR51F1A6NGY5 319 aa13.71□□□□□ -0.21
RPL28-202ENST00000426763 AP3D1O14617 1153 aa13.71□□□□□ -0.21
RPL28-202ENST00000426763 TNFP01375 233 aa13.71□□□□□ -0.21
RPL28-202ENST00000426763 ANXA4P09525 319 aaPredicted RBP13.71□□□□□ -0.21
RPL28-202ENST00000426763 KCNJ11Q14654 390 aa13.71□□□□□ -0.21
RPL28-202ENST00000426763 INO80DQ53TQ3 878 aaPredicted RBP13.71□□□□□ -0.21
RPL28-202ENST00000426763 CLLU1OSQ5K130 101 aa13.71□□□□□ -0.21
RPL28-202ENST00000426763 C14orf80Q86SX3 495 aa13.71□□□□□ -0.21
RPL28-202ENST00000426763 FAM20CQ8IXL6 584 aa13.71□□□□□ -0.21
RPL28-202ENST00000426763 DHRSXQ8N5I4 330 aa13.71□□□□□ -0.21
RPL28-202ENST00000426763 HAPLN2Q9GZV7 340 aa13.71□□□□□ -0.21
RPL28-202ENST00000426763 PCDHGA11Q9Y5H2 935 aa13.71□□□□□ -0.21
RPL28-202ENST00000426763 RFTN2Q52LD8 501 aaPredicted RBP13.71□□□□□ -0.21
RPL28-202ENST00000426763 FAM129CQ86XR2 697 aa13.71□□□□□ -0.21
RPL28-202ENST00000426763 NRSN1Q8IZ57 195 aa13.71□□□□□ -0.21
RPL28-202ENST00000426763 PQLC3Q8N755 202 aa13.71□□□□□ -0.21
RPL28-202ENST00000426763 SLC22A18Q96BI1 424 aa13.71□□□□□ -0.21
RPL28-202ENST00000426763 COPG1Q9Y678 874 aaKnown RBP13.71□□□□□ -0.21
RPL28-202ENST00000426763 MYH6P13533 1939 aa13.71□□□□□ -0.21
RPL28-202ENST00000426763 MEIS3P2A8K0S8 358 aa13.71□□□□□ -0.22
RPL28-202ENST00000426763 M0QZQ0 153 aa13.71□□□□□ -0.22
RPL28-202ENST00000426763 TK2O00142 265 aa13.71□□□□□ -0.22
RPL28-202ENST00000426763 PEX1O43933 1283 aa13.71□□□□□ -0.22
RPL28-202ENST00000426763 NPHS1O60500 1241 aa13.71□□□□□ -0.22
RPL28-202ENST00000426763 ERN1O75460 977 aaKnown RBP13.71□□□□□ -0.22
RPL28-202ENST00000426763 EPS8Q12929 822 aa13.71□□□□□ -0.22
RPL28-202ENST00000426763 LUZP2Q86TE4 346 aa13.71□□□□□ -0.22
RPL28-202ENST00000426763 OR52L1Q8NGH7 329 aa13.71□□□□□ -0.22
RPL28-202ENST00000426763 HOPXQ9BPY8 73 aaPredicted RBP13.71□□□□□ -0.22
RPL28-202ENST00000426763 CCM2Q9BSQ5 444 aa13.71□□□□□ -0.22
RPL28-202ENST00000426763 EPB41L4BQ9H329 900 aa13.71□□□□□ -0.22
RPL28-202ENST00000426763 TMEM245Q9H330 911 aa13.71□□□□□ -0.22
RPL28-202ENST00000426763 CD248Q9HCU0 757 aa13.71□□□□□ -0.22
RPL28-202ENST00000426763 NRP2O60462 931 aa13.7□□□□□ -0.22
RPL28-202ENST00000426763 CLDN7O95471 211 aa13.7□□□□□ -0.22
RPL28-202ENST00000426763 FAM58BPP0C7Q3 252 aa13.7□□□□□ -0.22
RPL28-202ENST00000426763 GSSP48637 474 aa13.7□□□□□ -0.22
RPL28-202ENST00000426763 MAPK12P53778 367 aa13.7□□□□□ -0.22
RPL28-202ENST00000426763 SMARCD2Q92925 531 aa13.7□□□□□ -0.22
RPL28-202ENST00000426763 MIPEPQ99797 713 aa13.7□□□□□ -0.22
RPL28-202ENST00000426763 PRPF19Q9UMS4 504 aaKnown RBP13.7□□□□□ -0.22
RPL28-202ENST00000426763 ANKRD36CQ5JPF3 1778 aa13.7□□□□□ -0.22
RPL28-202ENST00000426763 LATS1O95835 1130 aa13.7□□□□□ -0.22
RPL28-202ENST00000426763 GRIA1P42261 906 aa13.7□□□□□ -0.22
RPL28-202ENST00000426763 PRR23BQ6ZRT6 265 aa13.7□□□□□ -0.22
RPL28-202ENST00000426763 CPSF7Q8N684 471 aaKnown RBP13.7□□□□□ -0.22
RPL28-202ENST00000426763 ADAMTS15Q8TE58 950 aa13.7□□□□□ -0.22
RPL28-202ENST00000426763 BRINP2Q9C0B6 783 aa13.7□□□□□ -0.22
RPL28-202ENST00000426763 ZNF229Q9UJW7 825 aa13.7□□□□□ -0.22
RPL28-202ENST00000426763 MMP20O60882 483 aa13.7□□□□□ -0.22
RPL28-202ENST00000426763 SLC25A12O75746 678 aa13.7□□□□□ -0.22
RPL28-202ENST00000426763 POLR2JP52435 117 aaKnown RBP13.7□□□□□ -0.22
RPL28-202ENST00000426763 INAVAQ3KP66 663 aa13.7□□□□□ -0.22
RPL28-202ENST00000426763 FAAH2Q6GMR7 532 aa13.7□□□□□ -0.22
RPL28-202ENST00000426763 TYW3Q6IPR3 259 aaKnown RBP13.7□□□□□ -0.22
RPL28-202ENST00000426763 GPRIN1Q7Z2K8 1008 aa13.7□□□□□ -0.22
RPL28-202ENST00000426763 SVOPQ8N4V2 548 aa13.7□□□□□ -0.22
RPL28-202ENST00000426763 KBTBD7Q8WVZ9 684 aa13.7□□□□□ -0.22
RPL28-202ENST00000426763 DTNBP1Q96EV8 351 aa13.7□□□□□ -0.22
RPL28-202ENST00000426763 TOX2Q96NM4 488 aa13.7□□□□□ -0.22
RPL28-202ENST00000426763 ATP6V1HQ9UI12 483 aa13.7□□□□□ -0.22
RPL28-202ENST00000426763 TCRBV7S3A2A0A539 114 aa13.7□□□□□ -0.22
RPL28-202ENST00000426763 OR4F21O95013 312 aa13.7□□□□□ -0.22
RPL28-202ENST00000426763 CCNYL3P0C7X3 344 aa13.7□□□□□ -0.22
RPL28-202ENST00000426763 CCDC142Q17RM4 750 aa13.7□□□□□ -0.22
RPL28-202ENST00000426763 PLEKHG4Q58EX7 1191 aa13.7□□□□□ -0.22
RPL28-202ENST00000426763 FBXO48Q5FWF7 155 aa13.7□□□□□ -0.22
RPL28-202ENST00000426763 ZDHHC24Q6UX98 284 aa13.7□□□□□ -0.22
RPL28-202ENST00000426763 EIF3MQ7L2H7 374 aaKnown RBP13.7□□□□□ -0.22
RPL28-202ENST00000426763 ZNF605Q86T29 641 aa13.7□□□□□ -0.22
RPL28-202ENST00000426763 AVL9Q8NBF6 648 aa13.7□□□□□ -0.22
RPL28-202ENST00000426763 RTKNQ9BST9 563 aa13.7□□□□□ -0.22
RPL28-202ENST00000426763 NUSAP1Q9BXS6 441 aaKnown RBP13.7□□□□□ -0.22
RPL28-202ENST00000426763 SEMA6AQ9H2E6 1030 aa13.7□□□□□ -0.22
RPL28-202ENST00000426763 MRPS30Q9NP92 439 aaKnown RBP13.7□□□□□ -0.22
RPL28-202ENST00000426763 ITM2CQ9NQX7 267 aa13.7□□□□□ -0.22
RPL28-202ENST00000426763 TPRKBQ9Y3C4 175 aa13.7□□□□□ -0.22
RPL28-202ENST00000426763 TGM5O43548 720 aa13.7□□□□□ -0.22
RPL28-202ENST00000426763 PSMG1O95456 288 aa13.7□□□□□ -0.22
RPL28-202ENST00000426763 CLDN10P78369 228 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms