RNA–Protein interactions for RNA: ENST00000400908.6

RERE-204, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RERE, Length 5,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-204ENST00000400908 MIPP30301 263 aa13.72□□□□□ -0.21
RERE-204ENST00000400908 RAB5BP61020 215 aa13.72□□□□□ -0.21
RERE-204ENST00000400908 PEX6Q13608 980 aa13.72□□□□□ -0.21
RERE-204ENST00000400908 PTPN20Q4JDL3 420 aa13.72□□□□□ -0.21
RERE-204ENST00000400908 SH3RF1Q7Z6J0 888 aa13.72□□□□□ -0.21
RERE-204ENST00000400908 SYVN1Q86TM6 617 aa13.72□□□□□ -0.21
RERE-204ENST00000400908 ADAM32Q8TC27 787 aa13.72□□□□□ -0.21
RERE-204ENST00000400908 AARSD1Q9BTE6 412 aaKnown RBP13.72□□□□□ -0.21
RERE-204ENST00000400908 GTPBP2Q9BX10 602 aaKnown RBP13.72□□□□□ -0.21
RERE-204ENST00000400908 POPDC2Q9HBU9 364 aa13.72□□□□□ -0.21
RERE-204ENST00000400908 C1orf109Q9NX04 203 aa13.72□□□□□ -0.21
RERE-204ENST00000400908 POFUT2Q9Y2G5 429 aa13.72□□□□□ -0.21
RERE-204ENST00000400908 M0R129 80 aa13.72□□□□□ -0.21
RERE-204ENST00000400908 ABHD2P08910 425 aa13.72□□□□□ -0.21
RERE-204ENST00000400908 MASP1P48740 699 aa13.72□□□□□ -0.21
RERE-204ENST00000400908 ZNF155Q12901 538 aaPredicted RBP13.72□□□□□ -0.21
RERE-204ENST00000400908 CCNYL2Q5T2Q4 361 aa13.72□□□□□ -0.21
RERE-204ENST00000400908 C6orf183Q5T699 404 aa13.72□□□□□ -0.21
RERE-204ENST00000400908 TOMM5Q8N4H5 51 aa13.72□□□□□ -0.21
RERE-204ENST00000400908 ZNF709Q8N972 641 aa13.72□□□□□ -0.21
RERE-204ENST00000400908 BRSK1Q8TDC3 778 aa13.72□□□□□ -0.21
RERE-204ENST00000400908 RAB2BQ8WUD1 216 aa13.72□□□□□ -0.21
RERE-204ENST00000400908 DUSP9Q99956 384 aaKnown RBP13.72□□□□□ -0.21
RERE-204ENST00000400908 MRIQ9BWK5 157 aa13.72□□□□□ -0.21
RERE-204ENST00000400908 BRINP2Q9C0B6 783 aa13.72□□□□□ -0.21
RERE-204ENST00000400908 CACNA1FO60840 1977 aa13.72□□□□□ -0.21
RERE-204ENST00000400908 ATP6AP2A0A1C7CYW4 349 aa13.71□□□□□ -0.21
RERE-204ENST00000400908 ZNF878C9JN71 531 aa13.71□□□□□ -0.21
RERE-204ENST00000400908 ATP6AP2O75787 350 aa13.71□□□□□ -0.21
RERE-204ENST00000400908 HTR1BP28222 390 aa13.71□□□□□ -0.21
RERE-204ENST00000400908 APLP1P51693 650 aa13.71□□□□□ -0.21
RERE-204ENST00000400908 ZNF132P52740 706 aa13.71□□□□□ -0.21
RERE-204ENST00000400908 SOX10P56693 466 aa13.71□□□□□ -0.21
RERE-204ENST00000400908 NRG1Q02297 640 aaPredicted RBP13.71□□□□□ -0.21
RERE-204ENST00000400908 HERC3Q15034 1050 aa13.71□□□□□ -0.21
RERE-204ENST00000400908 ZNF311Q5JNZ3 666 aa13.71□□□□□ -0.21
RERE-204ENST00000400908 OGFOD2Q6N063 350 aa13.71□□□□□ -0.21
RERE-204ENST00000400908 TPGS1Q6ZTW0 290 aa13.71□□□□□ -0.21
RERE-204ENST00000400908 CPSF7Q8N684 471 aaKnown RBP13.71□□□□□ -0.21
RERE-204ENST00000400908 FAM13CQ8NE31 585 aa13.71□□□□□ -0.21
RERE-204ENST00000400908 HDAC7Q8WUI4 952 aa13.71□□□□□ -0.21
RERE-204ENST00000400908 LIN37Q96GY3 246 aaPredicted RBP13.71□□□□□ -0.21
RERE-204ENST00000400908 MRPL9Q9BYD2 267 aaKnown RBP13.71□□□□□ -0.21
RERE-204ENST00000400908 ZNF225Q9UK10 706 aa13.71□□□□□ -0.21
RERE-204ENST00000400908 PDE10AQ9Y233 779 aa13.71□□□□□ -0.21
RERE-204ENST00000400908 FAM237AA0A1B0GTK4 181 aa13.71□□□□□ -0.21
RERE-204ENST00000400908 C1QTNF3-AMACRE9PGA6 284 aa13.71□□□□□ -0.21
RERE-204ENST00000400908 HNRNPLP14866 589 aaKnown RBP eCLIP13.71□□□□□ -0.214e-7■■■■■ 27.8
RERE-204ENST00000400908 MATKP42679 507 aa13.71□□□□□ -0.21
RERE-204ENST00000400908 TMEM110Q86TL2 294 aa13.71□□□□□ -0.21
RERE-204ENST00000400908 PNLDC1Q8NA58 520 aaKnown RBP13.71□□□□□ -0.21
RERE-204ENST00000400908 ATP6V1C2Q8NEY4 427 aa13.71□□□□□ -0.21
RERE-204ENST00000400908 OR4C6Q8NH72 309 aa13.71□□□□□ -0.21
RERE-204ENST00000400908 OR10G6Q8NH81 332 aa13.71□□□□□ -0.21
RERE-204ENST00000400908 ERLEC1Q96DZ1 483 aa13.71□□□□□ -0.21
RERE-204ENST00000400908 MTMR8Q96EF0 704 aa13.71□□□□□ -0.21
RERE-204ENST00000400908 PTTG2Q9NZH5 202 aa13.71□□□□□ -0.21
RERE-204ENST00000400908 WASF3Q9UPY6 502 aa13.71□□□□□ -0.21
RERE-204ENST00000400908 SSX5O60225 188 aa13.71□□□□□ -0.21
RERE-204ENST00000400908 PCDHGA12O60330 932 aa13.71□□□□□ -0.21
RERE-204ENST00000400908 DDNO94850 711 aaPredicted RBP13.71□□□□□ -0.21
RERE-204ENST00000400908 CXCL8P10145 99 aa13.71□□□□□ -0.21
RERE-204ENST00000400908 HSD17B2P37059 387 aa13.71□□□□□ -0.21
RERE-204ENST00000400908 ABL2P42684 1182 aa13.71□□□□□ -0.21
RERE-204ENST00000400908 RAB27AP51159 221 aa13.71□□□□□ -0.21
RERE-204ENST00000400908 AUHQ13825 339 aaKnown RBP13.71□□□□□ -0.21
RERE-204ENST00000400908 TMEM44Q2T9K0 475 aa13.71□□□□□ -0.21
RERE-204ENST00000400908 KLHL22Q53GT1 634 aa13.71□□□□□ -0.21
RERE-204ENST00000400908 PPP1R26Q5T8A7 1209 aaPredicted RBP13.71□□□□□ -0.21
RERE-204ENST00000400908 CRYBG2Q8N1P7 616 aa13.71□□□□□ -0.21
RERE-204ENST00000400908 SLC44A3Q8N4M1 653 aa13.71□□□□□ -0.21
RERE-204ENST00000400908 TRPM4Q8TD43 1214 aa13.71□□□□□ -0.21
RERE-204ENST00000400908 ZNF431Q8TF32 576 aaPredicted RBP13.71□□□□□ -0.21
RERE-204ENST00000400908 DPAGT1Q9H3H5 408 aa13.71□□□□□ -0.21
RERE-204ENST00000400908 TIMM13Q9Y5L4 95 aaPredicted RBP13.71□□□□□ -0.21
RERE-204ENST00000400908 FAM208AQ9UK61 1670 aaKnown RBP13.71□□□□□ -0.21
RERE-204ENST00000400908 TVP23AA6NH52 213 aa13.71□□□□□ -0.21
RERE-204ENST00000400908 ADAMDEC1O15204 470 aa13.71□□□□□ -0.21
RERE-204ENST00000400908 ERP29P30040 261 aaKnown RBP13.71□□□□□ -0.21
RERE-204ENST00000400908 GTF2A2P52657 109 aa13.71□□□□□ -0.21
RERE-204ENST00000400908 FCGRTP55899 365 aa13.71□□□□□ -0.21
RERE-204ENST00000400908 MAB21L1Q13394 359 aa13.71□□□□□ -0.21
RERE-204ENST00000400908 SCGB2B2Q4G0G5 96 aa13.71□□□□□ -0.21
RERE-204ENST00000400908 SPIN3Q5JUX0 258 aa13.71□□□□□ -0.21
RERE-204ENST00000400908 SV2AQ7L0J3 742 aa13.71□□□□□ -0.21
RERE-204ENST00000400908 TMEM161BQ8NDZ6 487 aa13.71□□□□□ -0.21
RERE-204ENST00000400908 BPIFB1Q8TDL5 484 aa13.71□□□□□ -0.21
RERE-204ENST00000400908 XAGE5Q8WWM1 108 aa13.71□□□□□ -0.21
RERE-204ENST00000400908 PCDH18Q9HCL0 1135 aa13.71□□□□□ -0.21
RERE-204ENST00000400908 A0A1W2PRQ8 180 aa13.71□□□□□ -0.22
RERE-204ENST00000400908 EML1O00423 815 aa13.71□□□□□ -0.22
RERE-204ENST00000400908 SASH3O75995 380 aa13.71□□□□□ -0.22
RERE-204ENST00000400908 PGLSO95336 258 aa13.71□□□□□ -0.22
RERE-204ENST00000400908 EPHX2P34913 555 aa13.71□□□□□ -0.22
RERE-204ENST00000400908 CD83Q01151 205 aa13.71□□□□□ -0.22
RERE-204ENST00000400908 NAE1Q13564 534 aa13.71□□□□□ -0.22
RERE-204ENST00000400908 SVOPLQ8N434 492 aa13.71□□□□□ -0.22
RERE-204ENST00000400908 ATP13A3Q9H7F0 1226 aa13.71□□□□□ -0.22
RERE-204ENST00000400908 ARHGEF4Q9NR80 690 aa13.71□□□□□ -0.22
RERE-204ENST00000400908 CLCA1A8K7I4 914 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms