RNA–Protein interactions for RNA: ENST00000399953.7

NPRL3-201, Transcript of NPR3 like, GATOR1 complex subunit, humanhuman

TSL 1 (best) BASIC

Gene NPRL3, Length 2,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPRL3-201ENST00000399953 TRAPPC4Q9Y296 219 aa16.42■□□□□ 0.22
NPRL3-201ENST00000399953 KLHL20Q9Y2M5 609 aa16.42■□□□□ 0.22
NPRL3-201ENST00000399953 SIPA1L1O43166 1804 aa16.42■□□□□ 0.22
NPRL3-201ENST00000399953 INO80B-WBP1J3KQ70 363 aa16.42■□□□□ 0.22
NPRL3-201ENST00000399953 TSPAN4O14817 238 aa16.42■□□□□ 0.22
NPRL3-201ENST00000399953 GRAP2O75791 330 aa16.42■□□□□ 0.22
NPRL3-201ENST00000399953 OR2B3O76000 313 aa16.42■□□□□ 0.22
NPRL3-201ENST00000399953 ZNF30P17039 623 aa16.42■□□□□ 0.22
NPRL3-201ENST00000399953 CSTF2P33240 577 aaKnown RBP eCLIP16.42■□□□□ 0.22
NPRL3-201ENST00000399953 OLIG2Q13516 323 aa16.42■□□□□ 0.22
NPRL3-201ENST00000399953 ANKRD34AQ69YU3 496 aa16.42■□□□□ 0.22
NPRL3-201ENST00000399953 RPS27LQ71UM5 84 aaKnown RBP16.42■□□□□ 0.22
NPRL3-201ENST00000399953 ZNF540Q8NDQ6 660 aa16.42■□□□□ 0.22
NPRL3-201ENST00000399953 C3orf30Q96M34 536 aa16.42■□□□□ 0.22
NPRL3-201ENST00000399953 LGMNQ99538 433 aa16.42■□□□□ 0.22
NPRL3-201ENST00000399953 NIPAL2Q9H841 368 aa16.42■□□□□ 0.22
NPRL3-201ENST00000399953 WASH6PQ9NQA3 447 aa16.42■□□□□ 0.22
NPRL3-201ENST00000399953 MRPL11Q9Y3B7 192 aaKnown RBP16.42■□□□□ 0.22
NPRL3-201ENST00000399953 TYW5A2RUC4 315 aaKnown RBP16.41■□□□□ 0.22
NPRL3-201ENST00000399953 LINC00862A6NCI5 91 aa16.41■□□□□ 0.22
NPRL3-201ENST00000399953 LCKP06239 509 aa16.41■□□□□ 0.22
NPRL3-201ENST00000399953 ACADMP11310 421 aa16.41■□□□□ 0.22
NPRL3-201ENST00000399953 MSH3P20585 1137 aa16.41■□□□□ 0.22
NPRL3-201ENST00000399953 ASPAP45381 313 aa16.41■□□□□ 0.22
NPRL3-201ENST00000399953 IFRD2Q12894 506 aaPredicted RBP16.41■□□□□ 0.22
NPRL3-201ENST00000399953 DDR2Q16832 855 aa16.41■□□□□ 0.22
NPRL3-201ENST00000399953 OR6B2Q6IFH4 312 aa16.41■□□□□ 0.22
NPRL3-201ENST00000399953 CDH24Q86UP0 819 aa16.41■□□□□ 0.22
NPRL3-201ENST00000399953 TMEM74Q96NL1 305 aa16.41■□□□□ 0.22
NPRL3-201ENST00000399953 SNX7Q9UNH6 387 aa16.41■□□□□ 0.22
NPRL3-201ENST00000399953 RNF6Q9Y252 685 aa16.41■□□□□ 0.22
NPRL3-201ENST00000399953 ORC6Q9Y5N6 252 aa16.41■□□□□ 0.22
NPRL3-201ENST00000399953 I3L521 148 aa16.41■□□□□ 0.22
NPRL3-201ENST00000399953 CTSKP43235 329 aa16.41■□□□□ 0.22
NPRL3-201ENST00000399953 SOX9P48436 509 aa16.41■□□□□ 0.22
NPRL3-201ENST00000399953 SYT16Q17RD7 645 aa16.41■□□□□ 0.22
NPRL3-201ENST00000399953 AGAP9Q5VTM2 703 aa16.41■□□□□ 0.22
NPRL3-201ENST00000399953 TMEM65Q6PI78 240 aa16.41■□□□□ 0.22
NPRL3-201ENST00000399953 BLOC1S3Q6QNY0 202 aa16.41■□□□□ 0.22
NPRL3-201ENST00000399953 SPESP1Q6UW49 350 aa16.41■□□□□ 0.22
NPRL3-201ENST00000399953 NIPA1Q7RTP0 329 aa16.41■□□□□ 0.22
NPRL3-201ENST00000399953 ABI1Q8IZP0 508 aa16.41■□□□□ 0.22
NPRL3-201ENST00000399953 PDLIM5Q96HC4 596 aaKnown RBP16.41■□□□□ 0.22
NPRL3-201ENST00000399953 PCDH10Q9P2E7 1040 aa16.41■□□□□ 0.22
NPRL3-201ENST00000399953 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.41■□□□□ 0.22
NPRL3-201ENST00000399953 MFHAS1Q9Y4C4 1052 aa16.41■□□□□ 0.22
NPRL3-201ENST00000399953 ARPC4-TTLL3A0A0A6YYG9 625 aa16.4■□□□□ 0.22
NPRL3-201ENST00000399953 A0A0U1RQS6 177 aa16.4■□□□□ 0.22
NPRL3-201ENST00000399953 E5RI56 91 aa16.4■□□□□ 0.22
NPRL3-201ENST00000399953 TOR1AO14656 332 aa16.4■□□□□ 0.22
NPRL3-201ENST00000399953 DFNA5O60443 496 aa16.4■□□□□ 0.22
NPRL3-201ENST00000399953 B3GALNT1O75752 331 aa16.4■□□□□ 0.22
NPRL3-201ENST00000399953 IPO13O94829 963 aaKnown RBP16.4■□□□□ 0.22
NPRL3-201ENST00000399953 MICAL2O94851 1124 aa16.4■□□□□ 0.22
NPRL3-201ENST00000399953 POU3F3P20264 500 aaPredicted RBP16.4■□□□□ 0.22
NPRL3-201ENST00000399953 OR4D2P58180 307 aa16.4■□□□□ 0.22
NPRL3-201ENST00000399953 RPS6KA2Q15349 733 aa16.4■□□□□ 0.22
NPRL3-201ENST00000399953 RFX4Q33E94 735 aa16.4■□□□□ 0.22
NPRL3-201ENST00000399953 TIGD3Q6B0B8 471 aa16.4■□□□□ 0.22
NPRL3-201ENST00000399953 JADE1Q6IE81 842 aa16.4■□□□□ 0.22
NPRL3-201ENST00000399953 DNAAF3Q8N9W5 541 aa16.4■□□□□ 0.22
NPRL3-201ENST00000399953 MCPH1Q8NEM0 835 aa16.4■□□□□ 0.22
NPRL3-201ENST00000399953 TRNT1Q96Q11 434 aaKnown RBP16.4■□□□□ 0.22
NPRL3-201ENST00000399953 PIF1Q9H611 641 aa16.4■□□□□ 0.22
NPRL3-201ENST00000399953 PCDHB14Q9Y5E9 798 aa16.4■□□□□ 0.22
NPRL3-201ENST00000399953 A0A1W2PP18 115 aa16.4■□□□□ 0.22
NPRL3-201ENST00000399953 M0QYV0 167 aa16.4■□□□□ 0.22
NPRL3-201ENST00000399953 GNGT2O14610 69 aa16.4■□□□□ 0.22
NPRL3-201ENST00000399953 AKR7A2O43488 359 aa16.4■□□□□ 0.22
NPRL3-201ENST00000399953 CST1P01037 141 aa16.4■□□□□ 0.22
NPRL3-201ENST00000399953 GADD45AP24522 165 aa16.4■□□□□ 0.22
NPRL3-201ENST00000399953 LIPAP38571 399 aa16.4■□□□□ 0.22
NPRL3-201ENST00000399953 TGFB2P61812 414 aa16.4■□□□□ 0.22
NPRL3-201ENST00000399953 ZNF699Q32M78 642 aa16.4■□□□□ 0.22
NPRL3-201ENST00000399953 TKFCQ3LXA3 575 aa16.4■□□□□ 0.22
NPRL3-201ENST00000399953 NCBP2-AS2Q69YL0 99 aa16.4■□□□□ 0.22
NPRL3-201ENST00000399953 ST13P5Q8NFI4 369 aaPredicted RBP16.4■□□□□ 0.22
NPRL3-201ENST00000399953 FRS2Q8WU20 508 aa16.4■□□□□ 0.22
NPRL3-201ENST00000399953 HEXDCQ8WVB3 486 aa16.4■□□□□ 0.22
NPRL3-201ENST00000399953 CDCA5Q96FF9 252 aa16.4■□□□□ 0.22
NPRL3-201ENST00000399953 SLC30A2Q9BRI3 323 aa16.4■□□□□ 0.22
NPRL3-201ENST00000399953 A8MT66 165 aa16.39■□□□□ 0.21
NPRL3-201ENST00000399953 PLA2G6O60733 806 aa16.39■□□□□ 0.21
NPRL3-201ENST00000399953 DNTTP04053 509 aa16.39■□□□□ 0.21
NPRL3-201ENST00000399953 PRKCBP05771 671 aa16.39■□□□□ 0.21
NPRL3-201ENST00000399953 JAK3P52333 1124 aa16.39■□□□□ 0.21
NPRL3-201ENST00000399953 SNRPD2P62316 118 aaKnown RBP16.39■□□□□ 0.21
NPRL3-201ENST00000399953 SEZ6Q53EL9 994 aa16.39■□□□□ 0.21
NPRL3-201ENST00000399953 ZC3H12BQ5HYM0 836 aaKnown RBP16.39■□□□□ 0.21
NPRL3-201ENST00000399953 TMEM179Q6ZVK1 233 aa16.39■□□□□ 0.21
NPRL3-201ENST00000399953 FAM183BPQ6ZVS7 135 aa16.39■□□□□ 0.21
NPRL3-201ENST00000399953 HDDC2Q7Z4H3 204 aa16.39■□□□□ 0.21
NPRL3-201ENST00000399953 CEP97Q8IW35 865 aa16.39■□□□□ 0.21
NPRL3-201ENST00000399953 YIPF7Q8N8F6 280 aa16.39■□□□□ 0.21
NPRL3-201ENST00000399953 FLCNQ8NFG4 579 aa16.39■□□□□ 0.21
NPRL3-201ENST00000399953 P2RY11Q96G91 374 aa16.39■□□□□ 0.21
NPRL3-201ENST00000399953 PIWIL1Q96J94 861 aaKnown RBP16.39■□□□□ 0.21
NPRL3-201ENST00000399953 MMP28Q9H239 520 aa16.39■□□□□ 0.21
NPRL3-201ENST00000399953 SLC52A3Q9NQ40 469 aa16.39■□□□□ 0.21
NPRL3-201ENST00000399953 COMMD8Q9NX08 183 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms