RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 PTP4A1Q93096 173 aa4.9□□□□□ -1.63
HMGB1P10-201ENST00000395823 SPSB1Q96BD6 273 aa4.9□□□□□ -1.63
HMGB1P10-201ENST00000395823 PRMT6Q96LA8 375 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P10-201ENST00000395823 NLRP4Q96MN2 994 aa4.9□□□□□ -1.63
HMGB1P10-201ENST00000395823 MUS81Q96NY9 551 aa4.9□□□□□ -1.63
HMGB1P10-201ENST00000395823 OR6C1Q96RD1 312 aa4.9□□□□□ -1.63
HMGB1P10-201ENST00000395823 SPRTNQ9H040 489 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P10-201ENST00000395823 COPS7BQ9H9Q2 264 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P10-201ENST00000395823 TBC1D17Q9HA65 648 aa4.9□□□□□ -1.63
HMGB1P10-201ENST00000395823 COQ3Q9NZJ6 369 aa4.9□□□□□ -1.63
HMGB1P10-201ENST00000395823 RHCGQ9UBD6 479 aa4.9□□□□□ -1.63
HMGB1P10-201ENST00000395823 AGO1Q9UL18 857 aaKnown RBP4.9□□□□□ -1.63
HMGB1P10-201ENST00000395823 KLHL20Q9Y2M5 609 aa4.9□□□□□ -1.63
HMGB1P10-201ENST00000395823 LOXL2Q9Y4K0 774 aa4.9□□□□□ -1.63
HMGB1P10-201ENST00000395823 INSL5Q9Y5Q6 135 aa4.9□□□□□ -1.63
HMGB1P10-201ENST00000395823 SNX5Q9Y5X3 404 aa4.9□□□□□ -1.63
HMGB1P10-201ENST00000395823 hDV102S1A0JD36 115 aa4.89□□□□□ -1.63
HMGB1P10-201ENST00000395823 ANXA2P2A6NMY6 339 aa4.89□□□□□ -1.63
HMGB1P10-201ENST00000395823 DNM1LO00429 736 aa4.89□□□□□ -1.63
HMGB1P10-201ENST00000395823 WDR46O15213 610 aaKnown RBP4.89□□□□□ -1.63
HMGB1P10-201ENST00000395823 SSX4O60224 188 aa4.89□□□□□ -1.63
HMGB1P10-201ENST00000395823 FMO6PO60774 539 aa4.89□□□□□ -1.63
HMGB1P10-201ENST00000395823 AZGP1P25311 298 aaKnown RBP4.89□□□□□ -1.63
HMGB1P10-201ENST00000395823 ITGB8P26012 769 aa4.89□□□□□ -1.63
HMGB1P10-201ENST00000395823 RFX2P48378 723 aa4.89□□□□□ -1.63
HMGB1P10-201ENST00000395823 CLCNKAP51800 687 aa4.89□□□□□ -1.63
HMGB1P10-201ENST00000395823 BMXP51813 675 aa4.89□□□□□ -1.63
HMGB1P10-201ENST00000395823 CAPZA1P52907 286 aa4.89□□□□□ -1.63
HMGB1P10-201ENST00000395823 SNRPEP62304 92 aaKnown RBP4.89□□□□□ -1.63
HMGB1P10-201ENST00000395823 TUBB4BP68371 445 aa4.89□□□□□ -1.63
HMGB1P10-201ENST00000395823 RUNX1T1Q06455 604 aa4.89□□□□□ -1.63
HMGB1P10-201ENST00000395823 HSPB3Q12988 150 aa4.89□□□□□ -1.63
HMGB1P10-201ENST00000395823 PTK6Q13882 451 aa4.89□□□□□ -1.63
HMGB1P10-201ENST00000395823 CDC37Q16543 378 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P10-201ENST00000395823 TYSND1Q2T9J0 566 aa4.89□□□□□ -1.63
HMGB1P10-201ENST00000395823 FSCBQ5H9T9 825 aa4.89□□□□□ -1.63
HMGB1P10-201ENST00000395823 OTUD1Q5VV17 481 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P10-201ENST00000395823 KRT39Q6A163 491 aa4.89□□□□□ -1.63
HMGB1P10-201ENST00000395823 MEPCEQ7L2J0 689 aaKnown RBP4.89□□□□□ -1.63
HMGB1P10-201ENST00000395823 OTOAQ7RTW8 1153 aa4.89□□□□□ -1.63
HMGB1P10-201ENST00000395823 SPATA19Q7Z5L4 167 aa4.89□□□□□ -1.63
HMGB1P10-201ENST00000395823 ZNF34Q8IZ26 560 aa4.89□□□□□ -1.63
HMGB1P10-201ENST00000395823 NUP93Q8N1F7 819 aa4.89□□□□□ -1.63
HMGB1P10-201ENST00000395823 UTP15Q8TED0 518 aaKnown RBP4.89□□□□□ -1.63
HMGB1P10-201ENST00000395823 SPDL1Q96EA4 605 aa4.89□□□□□ -1.63
HMGB1P10-201ENST00000395823 TXNDC15Q96J42 360 aa4.89□□□□□ -1.63
HMGB1P10-201ENST00000395823 ZNF582Q96NG8 517 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P10-201ENST00000395823 CSF3RQ99062 836 aa4.89□□□□□ -1.63
HMGB1P10-201ENST00000395823 MOV10L1Q9BXT6 1211 aaKnown RBP4.89□□□□□ -1.63
HMGB1P10-201ENST00000395823 DPAGT1Q9H3H5 408 aa4.89□□□□□ -1.63
HMGB1P10-201ENST00000395823 SLA2Q9H6Q3 261 aa4.89□□□□□ -1.63
HMGB1P10-201ENST00000395823 NRIP3Q9NQ35 241 aa4.89□□□□□ -1.63
HMGB1P10-201ENST00000395823 DDX43Q9NXZ2 648 aaKnown RBP4.89□□□□□ -1.63
HMGB1P10-201ENST00000395823 KLHL9Q9P2J3 617 aa4.89□□□□□ -1.63
HMGB1P10-201ENST00000395823 SLC24A2Q9UI40 661 aa4.89□□□□□ -1.63
HMGB1P10-201ENST00000395823 KCNK7Q9Y2U2 307 aa4.89□□□□□ -1.63
HMGB1P10-201ENST00000395823 PTGDR2Q9Y5Y4 395 aa4.89□□□□□ -1.63
HMGB1P10-201ENST00000395823 RPS10-NUDT3A0A1W2PQS6 291 aa4.88□□□□□ -1.63
HMGB1P10-201ENST00000395823 OR2M5A3KFT3 312 aa4.88□□□□□ -1.63
HMGB1P10-201ENST00000395823 GOLGA6L9A6NEM1 432 aa4.88□□□□□ -1.63
HMGB1P10-201ENST00000395823 TNFRSF13BO14836 293 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P10-201ENST00000395823 SLC16A5O15375 505 aa4.88□□□□□ -1.63
HMGB1P10-201ENST00000395823 IPO8O15397 1037 aaKnown RBP4.88□□□□□ -1.63
HMGB1P10-201ENST00000395823 ASAP2O43150 1006 aa4.88□□□□□ -1.63
HMGB1P10-201ENST00000395823 ZBTB43O43298 467 aa4.88□□□□□ -1.63
HMGB1P10-201ENST00000395823 XRCC3O43542 346 aa4.88□□□□□ -1.63
HMGB1P10-201ENST00000395823 GBAP04062 536 aa4.88□□□□□ -1.63
HMGB1P10-201ENST00000395823 FAM58BPP0C7Q3 252 aa4.88□□□□□ -1.63
HMGB1P10-201ENST00000395823 ADRA2CP18825 462 aa4.88□□□□□ -1.63
HMGB1P10-201ENST00000395823 TCF7P36402 384 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P10-201ENST00000395823 CRKLP46109 303 aaKnown RBP4.88□□□□□ -1.63
HMGB1P10-201ENST00000395823 AMTP48728 403 aa4.88□□□□□ -1.63
HMGB1P10-201ENST00000395823 LIMK1P53667 647 aa4.88□□□□□ -1.63
HMGB1P10-201ENST00000395823 CD81P60033 236 aa4.88□□□□□ -1.63
HMGB1P10-201ENST00000395823 BNC1Q01954 994 aa4.88□□□□□ -1.63
HMGB1P10-201ENST00000395823 SCN1BQ07699 218 aa4.88□□□□□ -1.63
HMGB1P10-201ENST00000395823 KLF9Q13886 244 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P10-201ENST00000395823 RABEP1Q15276 862 aa4.88□□□□□ -1.63
HMGB1P10-201ENST00000395823 NHSL2Q5HYW2 709 aa4.88□□□□□ -1.63
HMGB1P10-201ENST00000395823 C6orf136Q5SQH8 315 aa4.88□□□□□ -1.63
HMGB1P10-201ENST00000395823 RGMBQ6NW40 437 aa4.88□□□□□ -1.63
HMGB1P10-201ENST00000395823 ZBTB49Q6ZSB9 765 aa4.88□□□□□ -1.63
HMGB1P10-201ENST00000395823 ABI3BPQ7Z7G0 1075 aa4.88□□□□□ -1.63
HMGB1P10-201ENST00000395823 CEP57L1Q8IYX8 460 aa4.88□□□□□ -1.63
HMGB1P10-201ENST00000395823 SIX6OS1Q8N1H7 587 aa4.88□□□□□ -1.63
HMGB1P10-201ENST00000395823 SLC5A8Q8N695 610 aa4.88□□□□□ -1.63
HMGB1P10-201ENST00000395823 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P10-201ENST00000395823 SPATA22Q8NHS9 363 aa4.88□□□□□ -1.63
HMGB1P10-201ENST00000395823 OCC1Q8TAD7 63 aa4.88□□□□□ -1.63
HMGB1P10-201ENST00000395823 AFAP1L1Q8TED9 768 aa4.88□□□□□ -1.63
HMGB1P10-201ENST00000395823 ROBO4Q8WZ75 1007 aa4.88□□□□□ -1.63
HMGB1P10-201ENST00000395823 EXT2Q93063 718 aa4.88□□□□□ -1.63
HMGB1P10-201ENST00000395823 CCDC114Q96M63 670 aa4.88□□□□□ -1.63
HMGB1P10-201ENST00000395823 KRTAP9-3Q9BYQ3 159 aa4.88□□□□□ -1.63
HMGB1P10-201ENST00000395823 TRPV4Q9HBA0 871 aa4.88□□□□□ -1.63
HMGB1P10-201ENST00000395823 OSER1Q9NX31 292 aa4.88□□□□□ -1.63
HMGB1P10-201ENST00000395823 FRMD4BQ9Y2L6 1034 aa4.88□□□□□ -1.63
HMGB1P10-201ENST00000395823 ATXN2Q99700 1313 aaKnown RBP4.88□□□□□ -1.63
HMGB1P10-201ENST00000395823 PRSS51A0A1B0GVH4 220 aa4.87□□□□□ -1.63
HMGB1P10-201ENST00000395823 HTR3EA5X5Y0 456 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms