RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 PDPRQ8NCN5 879 aa18.61■□□□□ 0.57
CBX1-202ENST00000393408 LPCAT1Q8NF37 534 aa18.61■□□□□ 0.57
CBX1-202ENST00000393408 PNPT1Q8TCS8 783 aaKnown RBP18.61■□□□□ 0.57
CBX1-202ENST00000393408 PPM1MQ96MI6 270 aa18.61■□□□□ 0.57
CBX1-202ENST00000393408 TUBA1CQ9BQE3 449 aa18.61■□□□□ 0.57
CBX1-202ENST00000393408 NAA50Q9GZZ1 169 aaKnown RBP18.61■□□□□ 0.57
CBX1-202ENST00000393408 SCUBE2Q9NQ36 999 aa18.61■□□□□ 0.57
CBX1-202ENST00000393408 A0A1W2PPW3 197 aa18.6■□□□□ 0.57
CBX1-202ENST00000393408 KDELR3O43731 214 aa18.6■□□□□ 0.57
CBX1-202ENST00000393408 TULP3O75386 442 aa18.6■□□□□ 0.57
CBX1-202ENST00000393408 CPNE6O95741 557 aa18.6■□□□□ 0.57
CBX1-202ENST00000393408 ZDHHC11BP0C7U3 371 aa18.6■□□□□ 0.57
CBX1-202ENST00000393408 KPNA1P52294 538 aaPredicted RBP18.6■□□□□ 0.57
CBX1-202ENST00000393408 ARSFP54793 590 aa18.6■□□□□ 0.57
CBX1-202ENST00000393408 OXCT1P55809 520 aa18.6■□□□□ 0.57
CBX1-202ENST00000393408 MTA1Q13330 715 aa18.6■□□□□ 0.57
CBX1-202ENST00000393408 MRPL58Q14197 206 aaKnown RBP18.6■□□□□ 0.57
CBX1-202ENST00000393408 HABP4Q5JVS0 413 aaKnown RBP18.6■□□□□ 0.57
CBX1-202ENST00000393408 OTUD3Q5T2D3 398 aaPredicted RBP18.6■□□□□ 0.57
CBX1-202ENST00000393408 TMEM214Q6NUQ4 689 aaKnown RBP18.6■□□□□ 0.57
CBX1-202ENST00000393408 DUS1LQ6P1R4 473 aaKnown RBP18.6■□□□□ 0.57
CBX1-202ENST00000393408 CHST15Q7LFX5 561 aaPredicted RBP18.6■□□□□ 0.57
CBX1-202ENST00000393408 KCNJ9Q92806 393 aa18.6■□□□□ 0.57
CBX1-202ENST00000393408 TRMT13Q9NUP7 481 aaKnown RBP18.6■□□□□ 0.57
CBX1-202ENST00000393408 ZFP37Q9Y6Q3 630 aaPredicted RBP18.6■□□□□ 0.57
CBX1-202ENST00000393408 ACSL4O60488 711 aa18.6■□□□□ 0.57
CBX1-202ENST00000393408 G6PDP11413 515 aa18.6■□□□□ 0.57
CBX1-202ENST00000393408 HMOX2P30519 316 aa18.6■□□□□ 0.57
CBX1-202ENST00000393408 ALDH3A2P51648 485 aa18.6■□□□□ 0.57
CBX1-202ENST00000393408 CLCN4P51793 760 aa18.6■□□□□ 0.57
CBX1-202ENST00000393408 MTPNP58546 118 aa18.6■□□□□ 0.57
CBX1-202ENST00000393408 NEDD8Q15843 81 aa18.6■□□□□ 0.57
CBX1-202ENST00000393408 THAP11Q96EK4 314 aa18.6■□□□□ 0.57
CBX1-202ENST00000393408 CNDP2Q96KP4 475 aaKnown RBP18.6■□□□□ 0.57
CBX1-202ENST00000393408 MUS81Q96NY9 551 aa18.6■□□□□ 0.57
CBX1-202ENST00000393408 CGREF1Q99674 301 aa18.6■□□□□ 0.57
CBX1-202ENST00000393408 SEPT5Q99719 369 aaPredicted RBP18.6■□□□□ 0.57
CBX1-202ENST00000393408 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.6■□□□□ 0.572e-6■■■■□ 26.6
CBX1-202ENST00000393408 NUDT4Q9NZJ9 180 aa18.6■□□□□ 0.57
CBX1-202ENST00000393408 ANKRD28O15084 1053 aa18.59■□□□□ 0.57
CBX1-202ENST00000393408 PFDN6O15212 129 aa18.59■□□□□ 0.57
CBX1-202ENST00000393408 FOXD2O60548 495 aaPredicted RBP18.59■□□□□ 0.57
CBX1-202ENST00000393408 DEAF1O75398 565 aaPredicted RBP18.59■□□□□ 0.57
CBX1-202ENST00000393408 VNN2O95498 520 aa18.59■□□□□ 0.57
CBX1-202ENST00000393408 CAPN1P07384 714 aa18.59■□□□□ 0.57
CBX1-202ENST00000393408 POLR2IP36954 125 aaKnown RBP18.59■□□□□ 0.57
CBX1-202ENST00000393408 GRSF1Q12849 480 aaKnown RBP eCLIP18.59■□□□□ 0.57
CBX1-202ENST00000393408 DAG1Q14118 895 aa18.59■□□□□ 0.57
CBX1-202ENST00000393408 KCNA10Q16322 511 aa18.59■□□□□ 0.57
CBX1-202ENST00000393408 ZIK1Q3SY52 487 aaPredicted RBP18.59■□□□□ 0.57
CBX1-202ENST00000393408 ZRANB3Q5FWF4 1079 aa18.59■□□□□ 0.57
CBX1-202ENST00000393408 FGD3Q5JSP0 725 aa18.59■□□□□ 0.57
CBX1-202ENST00000393408 FAM117BQ6P1L5 589 aa18.59■□□□□ 0.57
CBX1-202ENST00000393408 ZNF773Q6PK81 442 aa18.59■□□□□ 0.57
CBX1-202ENST00000393408 CYP20A1Q6UW02 462 aa18.59■□□□□ 0.57
CBX1-202ENST00000393408 Q6ZNX1 250 aa18.59■□□□□ 0.57
CBX1-202ENST00000393408 METTL6Q8TCB7 284 aa18.59■□□□□ 0.57
CBX1-202ENST00000393408 PPP1R14BQ96C90 147 aa18.59■□□□□ 0.57
CBX1-202ENST00000393408 SPATA17Q96L03 361 aa18.59■□□□□ 0.57
CBX1-202ENST00000393408 B3GALT6Q96L58 329 aa18.59■□□□□ 0.57
CBX1-202ENST00000393408 TMEM9Q9P0T7 183 aa18.59■□□□□ 0.57
CBX1-202ENST00000393408 AGO1Q9UL18 857 aaKnown RBP18.59■□□□□ 0.57
CBX1-202ENST00000393408 NEUROG3Q9Y4Z2 214 aa18.59■□□□□ 0.57
CBX1-202ENST00000393408 PCDHGC4Q9Y5F7 938 aa18.59■□□□□ 0.57
CBX1-202ENST00000393408 MTMR11A4FU01 709 aa18.59■□□□□ 0.57
CBX1-202ENST00000393408 OR6C75A6NL08 312 aa18.59■□□□□ 0.57
CBX1-202ENST00000393408 LSM1O15116 133 aaKnown RBP18.59■□□□□ 0.57
CBX1-202ENST00000393408 F11P03951 625 aa18.59■□□□□ 0.57
CBX1-202ENST00000393408 ANXA6P08133 673 aa18.59■□□□□ 0.57
CBX1-202ENST00000393408 RAP2AP10114 183 aa18.59■□□□□ 0.57
CBX1-202ENST00000393408 GGT1P19440 569 aa18.59■□□□□ 0.57
CBX1-202ENST00000393408 ELK4P28324 431 aa18.59■□□□□ 0.57
CBX1-202ENST00000393408 CDH4P55283 916 aa18.59■□□□□ 0.57
CBX1-202ENST00000393408 FAM171A1Q5VUB5 890 aa18.59■□□□□ 0.57
CBX1-202ENST00000393408 IL27RAQ6UWB1 636 aa18.59■□□□□ 0.57
CBX1-202ENST00000393408 TBC1D15Q8TC07 691 aa18.59■□□□□ 0.57
CBX1-202ENST00000393408 MIPOL1Q8TD10 442 aa18.59■□□□□ 0.57
CBX1-202ENST00000393408 NUDT8Q8WV74 236 aa18.59■□□□□ 0.57
CBX1-202ENST00000393408 LINC01599Q8WXQ3 324 aa18.59■□□□□ 0.57
CBX1-202ENST00000393408 TRIB2Q92519 343 aa18.59■□□□□ 0.57
CBX1-202ENST00000393408 TMBIM1Q969X1 311 aa18.59■□□□□ 0.57
CBX1-202ENST00000393408 BPIFA1Q9NP55 256 aa18.59■□□□□ 0.57
CBX1-202ENST00000393408 RAI2Q9Y5P3 530 aa18.59■□□□□ 0.57
CBX1-202ENST00000393408 CEP350Q5VT06 3117 aa18.58■□□□□ 0.57
CBX1-202ENST00000393408 E5RI56 91 aa18.58■□□□□ 0.57
CBX1-202ENST00000393408 ALPLP05186 524 aa18.58■□□□□ 0.57
CBX1-202ENST00000393408 TCF3P15923 654 aa18.58■□□□□ 0.57
CBX1-202ENST00000393408 CD247P20963 164 aa18.58■□□□□ 0.57
CBX1-202ENST00000393408 SHMT2P34897 504 aa18.58■□□□□ 0.57
CBX1-202ENST00000393408 DGKQP52824 942 aa18.58■□□□□ 0.57
CBX1-202ENST00000393408 RPS24P62847 133 aaKnown RBP18.58■□□□□ 0.57
CBX1-202ENST00000393408 PWP1Q13610 501 aa18.58■□□□□ 0.57
CBX1-202ENST00000393408 CBX2Q14781 532 aaPredicted RBP18.58■□□□□ 0.57
CBX1-202ENST00000393408 PCBP2Q15366 365 aaKnown RBP eCLIP18.58■□□□□ 0.57
CBX1-202ENST00000393408 C18orf21Q32NC0 220 aaPredicted RBP18.58■□□□□ 0.57
CBX1-202ENST00000393408 SLC24A5Q71RS6 500 aa18.58■□□□□ 0.57
CBX1-202ENST00000393408 ITIH5Q86UX2 942 aa18.58■□□□□ 0.57
CBX1-202ENST00000393408 OR13F1Q8NGS4 319 aa18.58■□□□□ 0.57
CBX1-202ENST00000393408 ITFG1Q8TB96 612 aa18.58■□□□□ 0.57
CBX1-202ENST00000393408 SARS2Q9NP81 518 aaKnown RBP18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms