RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 KIF5AQ12840 1032 aa3.03□□□□□ -1.92
PTPRC-205ENST00000391970 ZNF234Q14588 700 aa3.03□□□□□ -1.92
PTPRC-205ENST00000391970 LETM2Q2VYF4 491 aa3.03□□□□□ -1.92
PTPRC-205ENST00000391970 SPECC1Q5M775 1068 aa3.03□□□□□ -1.92
PTPRC-205ENST00000391970 ARMC3Q5W041 872 aa3.03□□□□□ -1.92
PTPRC-205ENST00000391970 ALS2CLQ60I27 953 aa3.03□□□□□ -1.92
PTPRC-205ENST00000391970 TRNP1Q6NT89 227 aa3.03□□□□□ -1.92
PTPRC-205ENST00000391970 GFRALQ6UXV0 394 aa3.03□□□□□ -1.92
PTPRC-205ENST00000391970 ZNF704Q6ZNC4 412 aaPredicted RBP3.03□□□□□ -1.92
PTPRC-205ENST00000391970 RBPMS2Q6ZRY4 209 aaKnown RBP3.03□□□□□ -1.92
PTPRC-205ENST00000391970 CREB3L2Q70SY1 520 aa3.03□□□□□ -1.92
PTPRC-205ENST00000391970 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.03□□□□□ -1.92
PTPRC-205ENST00000391970 TMPRSS12Q86WS5 348 aa3.03□□□□□ -1.92
PTPRC-205ENST00000391970 TMEM219Q86XT9 240 aa3.03□□□□□ -1.92
PTPRC-205ENST00000391970 ZNF595Q8IYB9 648 aa3.03□□□□□ -1.92
PTPRC-205ENST00000391970 C1orf52Q8N6N3 182 aaKnown RBP3.03□□□□□ -1.92
PTPRC-205ENST00000391970 OR6J1Q8NGC5 347 aa3.03□□□□□ -1.92
PTPRC-205ENST00000391970 OR52I2Q8NH67 350 aa3.03□□□□□ -1.92
PTPRC-205ENST00000391970 PPP4R1Q8TF05 950 aa3.03□□□□□ -1.92
PTPRC-205ENST00000391970 TEKT4Q8WW24 435 aa3.03□□□□□ -1.92
PTPRC-205ENST00000391970 NEUROG1Q92886 237 aa3.03□□□□□ -1.92
PTPRC-205ENST00000391970 VPS33AQ96AX1 596 aa3.03□□□□□ -1.92
PTPRC-205ENST00000391970 ZNF653Q96CK0 615 aa3.03□□□□□ -1.92
PTPRC-205ENST00000391970 RMDN1Q96DB5 314 aa3.03□□□□□ -1.92
PTPRC-205ENST00000391970 ERLEC1Q96DZ1 483 aa3.03□□□□□ -1.92
PTPRC-205ENST00000391970 SPACA9Q96E40 222 aaPredicted RBP3.03□□□□□ -1.92
PTPRC-205ENST00000391970 ARSGQ96EG1 525 aa3.03□□□□□ -1.92
PTPRC-205ENST00000391970 ADGRG7Q96K78 797 aa3.03□□□□□ -1.92
PTPRC-205ENST00000391970 CFAP57Q96MR6 1250 aa3.03□□□□□ -1.92
PTPRC-205ENST00000391970 ZNF830Q96NB3 372 aaPredicted RBP3.03□□□□□ -1.92
PTPRC-205ENST00000391970 MOV10L1Q9BXT6 1211 aaKnown RBP3.03□□□□□ -1.92
PTPRC-205ENST00000391970 GPR88Q9GZN0 384 aa3.03□□□□□ -1.92
PTPRC-205ENST00000391970 ANKRD2Q9GZV1 360 aa3.03□□□□□ -1.92
PTPRC-205ENST00000391970 GOLPH3LQ9H4A5 285 aa3.03□□□□□ -1.92
PTPRC-205ENST00000391970 ANKZF1Q9H8Y5 726 aa3.03□□□□□ -1.92
PTPRC-205ENST00000391970 HAO2Q9NYQ3 351 aa3.03□□□□□ -1.92
PTPRC-205ENST00000391970 DDX25Q9UHL0 483 aaKnown RBP3.03□□□□□ -1.92
PTPRC-205ENST00000391970 OSGIN1Q9UJX0 560 aa3.03□□□□□ -1.92
PTPRC-205ENST00000391970 KCNS2Q9ULS6 477 aa3.03□□□□□ -1.92
PTPRC-205ENST00000391970 OR2W1Q9Y3N9 320 aa3.03□□□□□ -1.92
PTPRC-205ENST00000391970 EVPLQ92817 2033 aa3.03□□□□□ -1.92
PTPRC-205ENST00000391970 PRAG1Q86YV5 1406 aa3.02□□□□□ -1.93
PTPRC-205ENST00000391970 A0A0G2JPF8 293 aa3.02□□□□□ -1.93
PTPRC-205ENST00000391970 A0A1W2PRQ8 180 aa3.02□□□□□ -1.93
PTPRC-205ENST00000391970 HEPACAM2A8MVW5 462 aa3.02□□□□□ -1.93
PTPRC-205ENST00000391970 HNRNPCL3B7ZW38 293 aa3.02□□□□□ -1.93
PTPRC-205ENST00000391970 TO15178 435 aa3.02□□□□□ -1.93
PTPRC-205ENST00000391970 SMAD6O43541 496 aaKnown RBP3.02□□□□□ -1.93
PTPRC-205ENST00000391970 SPRY1O43609 319 aaPredicted RBP3.02□□□□□ -1.93
PTPRC-205ENST00000391970 BUD23O43709 281 aaKnown RBP3.02□□□□□ -1.93
PTPRC-205ENST00000391970 SSX4O60224 188 aa3.02□□□□□ -1.93
PTPRC-205ENST00000391970 LDB3O75112 727 aa3.02□□□□□ -1.93
PTPRC-205ENST00000391970 TADA2AO75478 443 aa3.02□□□□□ -1.93
PTPRC-205ENST00000391970 TOMM70O94826 608 aa3.02□□□□□ -1.93
PTPRC-205ENST00000391970 CAMTA2O94983 1202 aa3.02□□□□□ -1.93
PTPRC-205ENST00000391970 TRUB2O95900 331 aaKnown RBP3.02□□□□□ -1.93
PTPRC-205ENST00000391970 NGFRP08138 427 aa3.02□□□□□ -1.93
PTPRC-205ENST00000391970 FAM106CPP0CH98 169 aa3.02□□□□□ -1.93
PTPRC-205ENST00000391970 HNRNPCL4P0DMR1 293 aa3.02□□□□□ -1.93
PTPRC-205ENST00000391970 HLA-DOBP13765 273 aa3.02□□□□□ -1.93
PTPRC-205ENST00000391970 ITGA2P17301 1181 aa3.02□□□□□ -1.93
PTPRC-205ENST00000391970 POLR2CP19387 275 aaPredicted RBP3.02□□□□□ -1.93
PTPRC-205ENST00000391970 DNASE1P24855 282 aa3.02□□□□□ -1.93
PTPRC-205ENST00000391970 CCKBRP32239 447 aa3.02□□□□□ -1.93
PTPRC-205ENST00000391970 GNL1P36915 607 aaPredicted RBP3.02□□□□□ -1.93
PTPRC-205ENST00000391970 ZNF41P51814 821 aaPredicted RBP3.02□□□□□ -1.93
PTPRC-205ENST00000391970 CSE1LP55060 971 aaKnown RBP3.02□□□□□ -1.93
PTPRC-205ENST00000391970 CD81P60033 236 aa3.02□□□□□ -1.93
PTPRC-205ENST00000391970 ISL1P61371 349 aa3.02□□□□□ -1.93
PTPRC-205ENST00000391970 IRX6P78412 446 aaPredicted RBP3.02□□□□□ -1.93
PTPRC-205ENST00000391970 PLIN5Q00G26 463 aa3.02□□□□□ -1.93
PTPRC-205ENST00000391970 RELQ04864 619 aaPredicted RBP3.02□□□□□ -1.93
PTPRC-205ENST00000391970 SNTA1Q13424 505 aa3.02□□□□□ -1.93
PTPRC-205ENST00000391970 NR1D2Q14995 579 aa3.02□□□□□ -1.93
PTPRC-205ENST00000391970 KRBOX4Q5JUW0 171 aa3.02□□□□□ -1.93
PTPRC-205ENST00000391970 CST9LP1Q5W188 147 aa3.02□□□□□ -1.93
PTPRC-205ENST00000391970 ASB18Q6ZVZ8 466 aa3.02□□□□□ -1.93
PTPRC-205ENST00000391970 CHST3Q7LGC8 479 aa3.02□□□□□ -1.93
PTPRC-205ENST00000391970 CCDC186Q7Z3E2 898 aa3.02□□□□□ -1.93
PTPRC-205ENST00000391970 SLFN11Q7Z7L1 901 aa3.02□□□□□ -1.93
PTPRC-205ENST00000391970 SATL1Q86VE3 508 aa3.02□□□□□ -1.93
PTPRC-205ENST00000391970 SPATA2LQ8IUW3 424 aaPredicted RBP3.02□□□□□ -1.93
PTPRC-205ENST00000391970 NKAIN3Q8N8D7 197 aa3.02□□□□□ -1.93
PTPRC-205ENST00000391970 PAPD5Q8NDF8 572 aaKnown RBP3.02□□□□□ -1.93
PTPRC-205ENST00000391970 LILRB1Q8NHL6 650 aaPredicted RBP3.02□□□□□ -1.93
PTPRC-205ENST00000391970 TMEM255BQ8WV15 326 aa3.02□□□□□ -1.93
PTPRC-205ENST00000391970 FIG4Q92562 907 aa3.02□□□□□ -1.93
PTPRC-205ENST00000391970 BICD1Q96G01 975 aa3.02□□□□□ -1.93
PTPRC-205ENST00000391970 LINC00615Q96LM1 132 aaPredicted RBP3.02□□□□□ -1.93
PTPRC-205ENST00000391970 MS4A10Q96PG2 267 aa3.02□□□□□ -1.93
PTPRC-205ENST00000391970 OR6C1Q96RD1 312 aa3.02□□□□□ -1.93
PTPRC-205ENST00000391970 OLFM1Q99784 485 aa3.02□□□□□ -1.93
PTPRC-205ENST00000391970 SYT17Q9BSW7 474 aa3.02□□□□□ -1.93
PTPRC-205ENST00000391970 EDEM3Q9BZQ6 932 aa3.02□□□□□ -1.93
PTPRC-205ENST00000391970 CSTL1Q9H114 145 aa3.02□□□□□ -1.93
PTPRC-205ENST00000391970 SEMA6AQ9H2E6 1030 aa3.02□□□□□ -1.93
PTPRC-205ENST00000391970 LRMDAQ9H2I8 198 aa3.02□□□□□ -1.93
PTPRC-205ENST00000391970 ZCCHC17Q9NP64 241 aaKnown RBP3.02□□□□□ -1.93
PTPRC-205ENST00000391970 SELENONQ9NZV5 590 aa3.02□□□□□ -1.93
PTPRC-205ENST00000391970 IL17BQ9UHF5 180 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms