RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 HM13Q8TCT9 377 aa14.78□□□□□ -0.04
IGHV3-53-201ENST00000390627 SLC37A2Q8TED4 501 aa14.78□□□□□ -0.04
IGHV3-53-201ENST00000390627 CCDC97Q96F63 343 aaPredicted RBP14.78□□□□□ -0.04
IGHV3-53-201ENST00000390627 STAMBPL1Q96FJ0 436 aa14.78□□□□□ -0.04
IGHV3-53-201ENST00000390627 SIGLEC10Q96LC7 697 aa14.78□□□□□ -0.04
IGHV3-53-201ENST00000390627 ERP44Q9BS26 406 aa14.78□□□□□ -0.04
IGHV3-53-201ENST00000390627 NAT9Q9BTE0 207 aa14.78□□□□□ -0.04
IGHV3-53-201ENST00000390627 RAB17Q9H0T7 212 aa14.78□□□□□ -0.04
IGHV3-53-201ENST00000390627 WASH6PQ9NQA3 447 aa14.78□□□□□ -0.04
IGHV3-53-201ENST00000390627 PRDM8Q9NQV8 689 aa14.78□□□□□ -0.04
IGHV3-53-201ENST00000390627 ANGPTL2Q9UKU9 493 aa14.78□□□□□ -0.04
IGHV3-53-201ENST00000390627 SNX24Q9Y343 169 aa14.78□□□□□ -0.04
IGHV3-53-201ENST00000390627 RPS6KL1Q9Y6S9 549 aa14.78□□□□□ -0.04
IGHV3-53-201ENST00000390627 RNF215Q9Y6U7 377 aa14.78□□□□□ -0.04
IGHV3-53-201ENST00000390627 C17orf113A0A1B0GUU1 675 aa14.77□□□□□ -0.05
IGHV3-53-201ENST00000390627 PFDN6O15212 129 aa14.77□□□□□ -0.05
IGHV3-53-201ENST00000390627 EML2O95834 649 aa14.77□□□□□ -0.05
IGHV3-53-201ENST00000390627 FTH1P02794 183 aa14.77□□□□□ -0.05
IGHV3-53-201ENST00000390627 PGAM1P18669 254 aa14.77□□□□□ -0.05
IGHV3-53-201ENST00000390627 ARNTP27540 789 aa14.77□□□□□ -0.05
IGHV3-53-201ENST00000390627 HALP42357 657 aa14.77□□□□□ -0.05
IGHV3-53-201ENST00000390627 RPL21P46778 160 aaKnown RBP14.77□□□□□ -0.05
IGHV3-53-201ENST00000390627 ARL4CP56559 192 aa14.77□□□□□ -0.05
IGHV3-53-201ENST00000390627 MRPS25P82663 173 aaKnown RBP14.77□□□□□ -0.05
IGHV3-53-201ENST00000390627 SHC2P98077 582 aa14.77□□□□□ -0.05
IGHV3-53-201ENST00000390627 INSM1Q01101 510 aaPredicted RBP14.77□□□□□ -0.05
IGHV3-53-201ENST00000390627 HHEXQ03014 270 aa14.77□□□□□ -0.05
IGHV3-53-201ENST00000390627 DHX9Q08211 1270 aaKnown RBP14.77□□□□□ -0.05
IGHV3-53-201ENST00000390627 NFE2L1Q14494 772 aa14.77□□□□□ -0.05
IGHV3-53-201ENST00000390627 SEPT7Q16181 437 aaKnown RBP14.77□□□□□ -0.05
IGHV3-53-201ENST00000390627 HIF1AQ16665 826 aa14.77□□□□□ -0.05
IGHV3-53-201ENST00000390627 ABRAXAS1Q6UWZ7 409 aa14.77□□□□□ -0.05
IGHV3-53-201ENST00000390627 ZNF438Q7Z4V0 828 aa14.77□□□□□ -0.05
IGHV3-53-201ENST00000390627 SDCCAG8Q86SQ7 713 aaPredicted RBP14.77□□□□□ -0.05
IGHV3-53-201ENST00000390627 CCNJLQ8IV13 435 aa14.77□□□□□ -0.05
IGHV3-53-201ENST00000390627 SH3KBP1Q96B97 665 aa14.77□□□□□ -0.05
IGHV3-53-201ENST00000390627 SYNDIG1Q9H7V2 258 aa14.77□□□□□ -0.05
IGHV3-53-201ENST00000390627 SARS2Q9NP81 518 aaKnown RBP14.77□□□□□ -0.05
IGHV3-53-201ENST00000390627 WHRNQ9P202 907 aa14.77□□□□□ -0.05
IGHV3-53-201ENST00000390627 WASF3Q9UPY6 502 aa14.77□□□□□ -0.05
IGHV3-53-201ENST00000390627 TRBV23OR9-2A0A075B6M9 112 aa14.76□□□□□ -0.05
IGHV3-53-201ENST00000390627 TCEA3O75764 348 aa14.76□□□□□ -0.05
IGHV3-53-201ENST00000390627 TTC4O95801 387 aa14.76□□□□□ -0.05
IGHV3-53-201ENST00000390627 POLBP06746 335 aa14.76□□□□□ -0.05
IGHV3-53-201ENST00000390627 OR56A5P0C7T3 313 aa14.76□□□□□ -0.05
IGHV3-53-201ENST00000390627 OGNP20774 298 aaKnown RBP14.76□□□□□ -0.05
IGHV3-53-201ENST00000390627 RPL10P27635 214 aaKnown RBP14.76□□□□□ -0.05
IGHV3-53-201ENST00000390627 GPR3P46089 330 aa14.76□□□□□ -0.05
IGHV3-53-201ENST00000390627 THOC5Q13769 683 aaKnown RBP14.76□□□□□ -0.05
IGHV3-53-201ENST00000390627 SEMA3AQ14563 771 aa14.76□□□□□ -0.05
IGHV3-53-201ENST00000390627 NR1D2Q14995 579 aa14.76□□□□□ -0.05
IGHV3-53-201ENST00000390627 BBS9Q3SYG4 887 aa14.76□□□□□ -0.05
IGHV3-53-201ENST00000390627 RNF187Q5TA31 235 aaPredicted RBP14.76□□□□□ -0.05
IGHV3-53-201ENST00000390627 METRNLQ641Q3 311 aa14.76□□□□□ -0.05
IGHV3-53-201ENST00000390627 C8orf74Q6P047 294 aa14.76□□□□□ -0.05
IGHV3-53-201ENST00000390627 ZNF449Q6P9G9 518 aa14.76□□□□□ -0.05
IGHV3-53-201ENST00000390627 TRIM48Q8IWZ4 208 aa14.76□□□□□ -0.05
IGHV3-53-201ENST00000390627 CACTIN-AS1Q8N1I8 211 aa14.76□□□□□ -0.05
IGHV3-53-201ENST00000390627 AGGF1Q8N302 714 aaeCLIP14.76□□□□□ -0.05
IGHV3-53-201ENST00000390627 CLDN19Q8N6F1 224 aa14.76□□□□□ -0.05
IGHV3-53-201ENST00000390627 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.76□□□□□ -0.05
IGHV3-53-201ENST00000390627 NAT14Q8WUY8 206 aa14.76□□□□□ -0.05
IGHV3-53-201ENST00000390627 LRRC39Q96DD0 335 aa14.76□□□□□ -0.05
IGHV3-53-201ENST00000390627 EBNA1BP2Q99848 306 aaKnown RBP14.76□□□□□ -0.05
IGHV3-53-201ENST00000390627 CCM2Q9BSQ5 444 aa14.76□□□□□ -0.05
IGHV3-53-201ENST00000390627 SCNM1Q9BWG6 230 aa14.76□□□□□ -0.05
IGHV3-53-201ENST00000390627 TSSK1BQ9BXA7 367 aa14.76□□□□□ -0.05
IGHV3-53-201ENST00000390627 DPH5Q9H2P9 285 aa14.76□□□□□ -0.05
IGHV3-53-201ENST00000390627 POT1Q9NUX5 634 aa14.76□□□□□ -0.05
IGHV3-53-201ENST00000390627 MARCH4Q9P2E8 410 aaPredicted RBP14.76□□□□□ -0.05
IGHV3-53-201ENST00000390627 CPNE7Q9UBL6 633 aa14.76□□□□□ -0.05
IGHV3-53-201ENST00000390627 RABGEF1Q9UJ41 708 aa14.76□□□□□ -0.05
IGHV3-53-201ENST00000390627 ACSL5Q9ULC5 683 aa14.76□□□□□ -0.05
IGHV3-53-201ENST00000390627 CLCA2Q9UQC9 943 aa14.76□□□□□ -0.05
IGHV3-53-201ENST00000390627 NEUROG3Q9Y4Z2 214 aa14.76□□□□□ -0.05
IGHV3-53-201ENST00000390627 ZCWPW2A0A1B0GU75 182 aa14.75□□□□□ -0.05
IGHV3-53-201ENST00000390627 CTAGE15A4D2H0 777 aa14.75□□□□□ -0.05
IGHV3-53-201ENST00000390627 PRMT5O14744 637 aaPredicted RBP14.75□□□□□ -0.05
IGHV3-53-201ENST00000390627 OR1I1O60431 355 aa14.75□□□□□ -0.05
IGHV3-53-201ENST00000390627 NDUFS3O75489 264 aa14.75□□□□□ -0.05
IGHV3-53-201ENST00000390627 TOP3BO95985 862 aaKnown RBP14.75□□□□□ -0.05
IGHV3-53-201ENST00000390627 MT-CO3P00414 261 aa14.75□□□□□ -0.05
IGHV3-53-201ENST00000390627 RPLP0P05388 317 aaKnown RBP14.75□□□□□ -0.05
IGHV3-53-201ENST00000390627 SLC35G4P0C7Q5 338 aa14.75□□□□□ -0.05
IGHV3-53-201ENST00000390627 CTAGE8P0CG41 777 aa14.75□□□□□ -0.05
IGHV3-53-201ENST00000390627 JUPP14923 745 aa14.75□□□□□ -0.05
IGHV3-53-201ENST00000390627 ARCN1P48444 511 aaKnown RBP14.75□□□□□ -0.05
IGHV3-53-201ENST00000390627 DRG2P55039 364 aaKnown RBP14.75□□□□□ -0.05
IGHV3-53-201ENST00000390627 SPIDRQ14159 915 aa14.75□□□□□ -0.05
IGHV3-53-201ENST00000390627 LONRF1Q17RB8 773 aa14.75□□□□□ -0.05
IGHV3-53-201ENST00000390627 TYSND1Q2T9J0 566 aa14.75□□□□□ -0.05
IGHV3-53-201ENST00000390627 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.75□□□□□ -0.05
IGHV3-53-201ENST00000390627 DUPD1Q68J44 220 aa14.75□□□□□ -0.05
IGHV3-53-201ENST00000390627 NEPROQ6NW34 567 aa14.75□□□□□ -0.05
IGHV3-53-201ENST00000390627 FAM83HQ6ZRV2 1179 aaPredicted RBP14.75□□□□□ -0.05
IGHV3-53-201ENST00000390627 SPRED1Q7Z699 444 aa14.75□□□□□ -0.05
IGHV3-53-201ENST00000390627 LDB1Q86U70 411 aaPredicted RBP14.75□□□□□ -0.05
IGHV3-53-201ENST00000390627 CTAGE6Q86UF2 777 aa14.75□□□□□ -0.05
IGHV3-53-201ENST00000390627 LRRC6Q86X45 466 aa14.75□□□□□ -0.05
IGHV3-53-201ENST00000390627 CTAGE4Q8IX94 777 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms