RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 DHRS12A0PJE2 317 aa11.53□□□□□ -0.56
DDR1-227ENST00000376570 TNFRSF10BO14763 440 aa11.53□□□□□ -0.56
DDR1-227ENST00000376570 SYN3O14994 580 aa11.53□□□□□ -0.56
DDR1-227ENST00000376570 H2AFYO75367 372 aaKnown RBP11.53□□□□□ -0.56
DDR1-227ENST00000376570 SLC22A3O75751 556 aa11.53□□□□□ -0.56
DDR1-227ENST00000376570 G6PDP11413 515 aa11.53□□□□□ -0.56
DDR1-227ENST00000376570 ALDH4A1P30038 563 aa11.53□□□□□ -0.56
DDR1-227ENST00000376570 PTGER1P34995 402 aa11.53□□□□□ -0.56
DDR1-227ENST00000376570 PIGFQ07326 219 aa11.53□□□□□ -0.56
DDR1-227ENST00000376570 NAE1Q13564 534 aa11.53□□□□□ -0.56
DDR1-227ENST00000376570 SQLEQ14534 574 aa11.53□□□□□ -0.56
DDR1-227ENST00000376570 GTDC1Q4AE62 458 aa11.53□□□□□ -0.56
DDR1-227ENST00000376570 SAMD4BQ5PRF9 694 aaKnown RBP11.53□□□□□ -0.56
DDR1-227ENST00000376570 KCTD11Q693B1 232 aa11.53□□□□□ -0.56
DDR1-227ENST00000376570 KDELC1Q6UW63 502 aa11.53□□□□□ -0.56
DDR1-227ENST00000376570 B3GNT6Q6ZMB0 384 aa11.53□□□□□ -0.56
DDR1-227ENST00000376570 UBE2R2Q712K3 238 aaPredicted RBP11.53□□□□□ -0.56
DDR1-227ENST00000376570 FLCNQ8NFG4 579 aa11.53□□□□□ -0.56
DDR1-227ENST00000376570 PXYLP1Q8TE99 480 aa11.53□□□□□ -0.56
DDR1-227ENST00000376570 DOK4Q8TEW6 326 aa11.53□□□□□ -0.56
DDR1-227ENST00000376570 RNF11Q9Y3C5 154 aa11.53□□□□□ -0.56
DDR1-227ENST00000376570 MRPS23Q9Y3D9 190 aaKnown RBP11.53□□□□□ -0.56
DDR1-227ENST00000376570 UBFD1O14562 309 aaKnown RBP11.53□□□□□ -0.56
DDR1-227ENST00000376570 ZSCAN9O15535 394 aaPredicted RBP11.53□□□□□ -0.56
DDR1-227ENST00000376570 HOXA2O43364 376 aa11.53□□□□□ -0.56
DDR1-227ENST00000376570 LATO43561 262 aa11.53□□□□□ -0.56
DDR1-227ENST00000376570 ALBP02768 609 aa11.53□□□□□ -0.56
DDR1-227ENST00000376570 EPB42P16452 691 aa11.53□□□□□ -0.56
DDR1-227ENST00000376570 MSH3P20585 1137 aa11.53□□□□□ -0.56
DDR1-227ENST00000376570 FASP25445 335 aa11.53□□□□□ -0.56
DDR1-227ENST00000376570 STC1P52823 247 aa11.53□□□□□ -0.56
DDR1-227ENST00000376570 CDH4P55283 916 aa11.53□□□□□ -0.56
DDR1-227ENST00000376570 SEMA3BQ13214 749 aa11.53□□□□□ -0.56
DDR1-227ENST00000376570 IHHQ14623 411 aa11.53□□□□□ -0.56
DDR1-227ENST00000376570 TMEM25Q86YD3 366 aa11.53□□□□□ -0.56
DDR1-227ENST00000376570 CHST14Q8NCH0 376 aa11.53□□□□□ -0.56
DDR1-227ENST00000376570 COPS8Q99627 209 aa11.53□□□□□ -0.56
DDR1-227ENST00000376570 FAM126AQ9BYI3 521 aaPredicted RBP11.53□□□□□ -0.56
DDR1-227ENST00000376570 TMEM248Q9NWD8 314 aa11.53□□□□□ -0.56
DDR1-227ENST00000376570 SLC25A13Q9UJS0 675 aa11.53□□□□□ -0.56
DDR1-227ENST00000376570 INVSQ9Y283 1065 aa11.53□□□□□ -0.56
DDR1-227ENST00000376570 WASH3PC4AMC7 463 aa11.52□□□□□ -0.56
DDR1-227ENST00000376570 RPL5P46777 297 aaKnown RBP11.52□□□□□ -0.56
DDR1-227ENST00000376570 ARCN1P48444 511 aaKnown RBP11.52□□□□□ -0.56
DDR1-227ENST00000376570 YBEYP58557 167 aaPredicted RBP11.52□□□□□ -0.56
DDR1-227ENST00000376570 OCA2Q04671 838 aa11.52□□□□□ -0.56
DDR1-227ENST00000376570 CHRNB3Q05901 458 aa11.52□□□□□ -0.56
DDR1-227ENST00000376570 MAPKAPK3Q16644 382 aa11.52□□□□□ -0.56
DDR1-227ENST00000376570 SYVN1Q86TM6 617 aa11.52□□□□□ -0.56
DDR1-227ENST00000376570 OR52J3Q8NH60 311 aa11.52□□□□□ -0.56
DDR1-227ENST00000376570 ZNF461Q8TAF7 563 aa11.52□□□□□ -0.56
DDR1-227ENST00000376570 ARRDC2Q8TBH0 407 aa11.52□□□□□ -0.56
DDR1-227ENST00000376570 OTUB1Q96FW1 271 aaPredicted RBP11.52□□□□□ -0.56
DDR1-227ENST00000376570 FUBP3Q96I24 572 aaKnown RBP eCLIP11.52□□□□□ -0.56
DDR1-227ENST00000376570 IGSF21Q96ID5 467 aa11.52□□□□□ -0.56
DDR1-227ENST00000376570 OR52E6Q96RD3 313 aa11.52□□□□□ -0.56
DDR1-227ENST00000376570 TDRD1Q9BXT4 1180 aaKnown RBP11.52□□□□□ -0.56
DDR1-227ENST00000376570 ZBTB26Q9HCK0 441 aa11.52□□□□□ -0.56
DDR1-227ENST00000376570 POLG2Q9UHN1 485 aa11.52□□□□□ -0.56
DDR1-227ENST00000376570 CNOT6Q9ULM6 557 aaKnown RBP11.52□□□□□ -0.56
DDR1-227ENST00000376570 PLAGL1Q9UM63 463 aa11.52□□□□□ -0.56
DDR1-227ENST00000376570 EIF3LQ9Y262 564 aaKnown RBP11.52□□□□□ -0.56
DDR1-227ENST00000376570 GVINP1Q7Z2Y8 2422 aa11.52□□□□□ -0.56
DDR1-227ENST00000376570 KPNA5O15131 536 aa11.52□□□□□ -0.57
DDR1-227ENST00000376570 TLL1O43897 1013 aa11.52□□□□□ -0.57
DDR1-227ENST00000376570 B3GALT4O96024 378 aa11.52□□□□□ -0.57
DDR1-227ENST00000376570 CCL5P13501 91 aa11.52□□□□□ -0.57
DDR1-227ENST00000376570 RPIAP49247 311 aa11.52□□□□□ -0.57
DDR1-227ENST00000376570 PRKAG1P54619 331 aa11.52□□□□□ -0.57
DDR1-227ENST00000376570 PRKAA2P54646 552 aa11.52□□□□□ -0.57
DDR1-227ENST00000376570 SIM2Q14190 667 aaPredicted RBP11.52□□□□□ -0.57
DDR1-227ENST00000376570 GSTA3Q16772 222 aa11.52□□□□□ -0.57
DDR1-227ENST00000376570 FNDC3BQ53EP0 1204 aaKnown RBP11.52□□□□□ -0.57
DDR1-227ENST00000376570 ZNF678Q5SXM1 525 aa11.52□□□□□ -0.57
DDR1-227ENST00000376570 SERPINA13PQ6UXR4 307 aa11.52□□□□□ -0.57
DDR1-227ENST00000376570 BHLHA9Q7RTU4 235 aa11.52□□□□□ -0.57
DDR1-227ENST00000376570 NECAB2Q7Z6G3 386 aa11.52□□□□□ -0.57
DDR1-227ENST00000376570 GRASPQ7Z6J2 395 aaPredicted RBP11.52□□□□□ -0.57
DDR1-227ENST00000376570 OR4F6Q8NGB9 312 aa11.52□□□□□ -0.57
DDR1-227ENST00000376570 ITFG1Q8TB96 612 aa11.52□□□□□ -0.57
DDR1-227ENST00000376570 AARSD1Q9BTE6 412 aaKnown RBP11.52□□□□□ -0.57
DDR1-227ENST00000376570 MAGEH1Q9H213 219 aa11.52□□□□□ -0.57
DDR1-227ENST00000376570 MMADHCQ9H3L0 296 aaPredicted RBP11.52□□□□□ -0.57
DDR1-227ENST00000376570 ATP13A3Q9H7F0 1226 aa11.52□□□□□ -0.57
DDR1-227ENST00000376570 CSNK1G1Q9HCP0 422 aa11.52□□□□□ -0.57
DDR1-227ENST00000376570 CTPS2Q9NRF8 586 aa11.52□□□□□ -0.57
DDR1-227ENST00000376570 STK39Q9UEW8 545 aa11.52□□□□□ -0.57
DDR1-227ENST00000376570 CCL26Q9Y258 94 aa11.52□□□□□ -0.57
DDR1-227ENST00000376570 COMMD3-BMI1R4GMX3 469 aa11.52□□□□□ -0.57
DDR1-227ENST00000376570 C1QAP02745 245 aa11.52□□□□□ -0.57
DDR1-227ENST00000376570 IMPDH1P20839 514 aa11.52□□□□□ -0.57
DDR1-227ENST00000376570 DPP6P42658 865 aa11.52□□□□□ -0.57
DDR1-227ENST00000376570 HERVK_113P63132 956 aa11.52□□□□□ -0.57
DDR1-227ENST00000376570 LCP2Q13094 533 aa11.52□□□□□ -0.57
DDR1-227ENST00000376570 TEAD2Q15562 447 aa11.52□□□□□ -0.57
DDR1-227ENST00000376570 ARSIQ5FYB1 569 aa11.52□□□□□ -0.57
DDR1-227ENST00000376570 IER5LQ5T953 404 aa11.52□□□□□ -0.57
DDR1-227ENST00000376570 LRRC66Q68CR7 880 aa11.52□□□□□ -0.57
DDR1-227ENST00000376570 PGAM4Q8N0Y7 254 aa11.52□□□□□ -0.57
DDR1-227ENST00000376570 KREMEN2Q8NCW0 462 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms