RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 CHD5Q8TDI0 1954 aa14.11□□□□□ -0.15
CD48-201ENST00000368045 JAK1P23458 1154 aa14.11□□□□□ -0.15
CD48-201ENST00000368045 HRH2P25021 359 aa14.11□□□□□ -0.15
CD48-201ENST00000368045 CLCN7P51798 805 aa14.11□□□□□ -0.15
CD48-201ENST00000368045 ADARB1P78563 741 aaKnown RBP14.11□□□□□ -0.15
CD48-201ENST00000368045 FUT11Q495W5 492 aa14.11□□□□□ -0.15
CD48-201ENST00000368045 NCEH1Q6PIU2 408 aa14.11□□□□□ -0.15
CD48-201ENST00000368045 RSPO2Q6UXX9 243 aaPredicted RBP14.11□□□□□ -0.15
CD48-201ENST00000368045 DLEU7Q6UYE1 221 aa14.11□□□□□ -0.15
CD48-201ENST00000368045 GPR180Q86V85 440 aa14.11□□□□□ -0.15
CD48-201ENST00000368045 RIMKLAQ8IXN7 391 aa14.11□□□□□ -0.15
CD48-201ENST00000368045 LRRC43Q8N309 656 aa14.11□□□□□ -0.15
CD48-201ENST00000368045 SFRP1Q8N474 314 aa14.11□□□□□ -0.15
CD48-201ENST00000368045 OR8J3Q8NGG0 315 aa14.11□□□□□ -0.15
CD48-201ENST00000368045 METTL6Q8TCB7 284 aa14.11□□□□□ -0.15
CD48-201ENST00000368045 ISOC1Q96CN7 298 aa14.11□□□□□ -0.15
CD48-201ENST00000368045 EXOC2Q96KP1 924 aa14.11□□□□□ -0.15
CD48-201ENST00000368045 CCDC115Q96NT0 180 aa14.11□□□□□ -0.15
CD48-201ENST00000368045 ZBED2Q9BTP6 218 aa14.11□□□□□ -0.15
CD48-201ENST00000368045 C1orf50Q9BV19 199 aa14.11□□□□□ -0.15
CD48-201ENST00000368045 CHID1Q9BWS9 393 aa14.11□□□□□ -0.15
CD48-201ENST00000368045 ARHGAP39Q9C0H5 1083 aa14.11□□□□□ -0.15
CD48-201ENST00000368045 HIPK3Q9H422 1215 aa14.11□□□□□ -0.15
CD48-201ENST00000368045 RPF2Q9H7B2 306 aaKnown RBP14.11□□□□□ -0.15
CD48-201ENST00000368045 RRAGCQ9HB90 399 aa14.11□□□□□ -0.15
CD48-201ENST00000368045 INTS7Q9NVH2 962 aaKnown RBP14.11□□□□□ -0.15
CD48-201ENST00000368045 AP3M1Q9Y2T2 418 aa14.11□□□□□ -0.15
CD48-201ENST00000368045 PKP3Q9Y446 797 aa14.11□□□□□ -0.15
CD48-201ENST00000368045 PCDHGC4Q9Y5F7 938 aa14.11□□□□□ -0.15
CD48-201ENST00000368045 GMEB1Q9Y692 573 aa14.11□□□□□ -0.15
CD48-201ENST00000368045 CBX4O00257 560 aa14.1□□□□□ -0.15
CD48-201ENST00000368045 PRMT5O14744 637 aaPredicted RBP14.1□□□□□ -0.15
CD48-201ENST00000368045 DEAF1O75398 565 aaPredicted RBP14.1□□□□□ -0.15
CD48-201ENST00000368045 PRSS23O95084 383 aa14.1□□□□□ -0.15
CD48-201ENST00000368045 OTCP00480 354 aa14.1□□□□□ -0.15
CD48-201ENST00000368045 PRKAR2AP13861 404 aaKnown RBP14.1□□□□□ -0.15
CD48-201ENST00000368045 NCK1P16333 377 aa14.1□□□□□ -0.15
CD48-201ENST00000368045 ATF6P18850 670 aa14.1□□□□□ -0.15
CD48-201ENST00000368045 SLC11A1P49279 550 aa14.1□□□□□ -0.15
CD48-201ENST00000368045 TRAF2Q12933 501 aa14.1□□□□□ -0.15
CD48-201ENST00000368045 PWP1Q13610 501 aa14.1□□□□□ -0.15
CD48-201ENST00000368045 FBXO48Q5FWF7 155 aa14.1□□□□□ -0.15
CD48-201ENST00000368045 LETMD1Q6P1Q0 360 aa14.1□□□□□ -0.15
CD48-201ENST00000368045 SCIMPQ6UWF3 145 aa14.1□□□□□ -0.15
CD48-201ENST00000368045 FRA10AC1Q70Z53 315 aa14.1□□□□□ -0.15
CD48-201ENST00000368045 TAS2R42Q7RTR8 314 aa14.1□□□□□ -0.15
CD48-201ENST00000368045 CLVS1Q8IUQ0 354 aaPredicted RBP14.1□□□□□ -0.15
CD48-201ENST00000368045 DENND1CQ8IV53 801 aa14.1□□□□□ -0.15
CD48-201ENST00000368045 EFHBQ8N7U6 833 aa14.1□□□□□ -0.15
CD48-201ENST00000368045 PDPRQ8NCN5 879 aa14.1□□□□□ -0.15
CD48-201ENST00000368045 POP5Q969H6 163 aaKnown RBP14.1□□□□□ -0.15
CD48-201ENST00000368045 PPP3R2Q96LZ3 170 aa14.1□□□□□ -0.15
CD48-201ENST00000368045 TMEM74Q96NL1 305 aa14.1□□□□□ -0.15
CD48-201ENST00000368045 CASD1Q96PB1 797 aa14.1□□□□□ -0.15
CD48-201ENST00000368045 CGREF1Q99674 301 aa14.1□□□□□ -0.15
CD48-201ENST00000368045 DOK1Q99704 481 aa14.1□□□□□ -0.15
CD48-201ENST00000368045 TUBA1CQ9BQE3 449 aa14.1□□□□□ -0.15
CD48-201ENST00000368045 TMEM175Q9BSA9 504 aa14.1□□□□□ -0.15
CD48-201ENST00000368045 TTPALQ9BTX7 342 aa14.1□□□□□ -0.15
CD48-201ENST00000368045 NPLQ9BXD5 320 aaPredicted RBP14.1□□□□□ -0.15
CD48-201ENST00000368045 IL17CQ9P0M4 197 aa14.1□□□□□ -0.15
CD48-201ENST00000368045 SLC30A1Q9Y6M5 507 aa14.1□□□□□ -0.15
CD48-201ENST00000368045 LSM1O15116 133 aaKnown RBP14.09□□□□□ -0.15
CD48-201ENST00000368045 RAD51BO15315 384 aa14.09□□□□□ -0.15
CD48-201ENST00000368045 GLUD1P00367 558 aa14.09□□□□□ -0.15
CD48-201ENST00000368045 CAPN1P07384 714 aa14.09□□□□□ -0.15
CD48-201ENST00000368045 ANXA6P08133 673 aa14.09□□□□□ -0.15
CD48-201ENST00000368045 RAP2AP10114 183 aa14.09□□□□□ -0.15
CD48-201ENST00000368045 RPS3P23396 243 aaKnown RBP eCLIP14.09□□□□□ -0.15
CD48-201ENST00000368045 VARSP26640 1264 aaKnown RBP14.09□□□□□ -0.15
CD48-201ENST00000368045 CORO1AP31146 461 aaKnown RBP14.09□□□□□ -0.15
CD48-201ENST00000368045 CASP2P42575 452 aa14.09□□□□□ -0.15
CD48-201ENST00000368045 TUFMP49411 452 aaKnown RBP14.09□□□□□ -0.15
CD48-201ENST00000368045 OR4D2P58180 307 aa14.09□□□□□ -0.15
CD48-201ENST00000368045 PRKCZQ05513 592 aa14.09□□□□□ -0.15
CD48-201ENST00000368045 MAD2L1Q13257 205 aaPredicted RBP14.09□□□□□ -0.15
CD48-201ENST00000368045 FAM98BQ52LJ0 330 aaKnown RBP14.09□□□□□ -0.15
CD48-201ENST00000368045 INO80DQ53TQ3 878 aaPredicted RBP14.09□□□□□ -0.15
CD48-201ENST00000368045 RTP2Q5QGT7 225 aa14.09□□□□□ -0.15
CD48-201ENST00000368045 CCNYL2Q5T2Q4 361 aa14.09□□□□□ -0.15
CD48-201ENST00000368045 ADGRF1Q5T601 910 aa14.09□□□□□ -0.15
CD48-201ENST00000368045 RNF219Q5W0B1 726 aaPredicted RBP14.09□□□□□ -0.15
CD48-201ENST00000368045 GLYATQ6IB77 296 aa14.09□□□□□ -0.15
CD48-201ENST00000368045 METTL2BQ6P1Q9 378 aaKnown RBP14.09□□□□□ -0.15
CD48-201ENST00000368045 SLC2A7Q6PXP3 512 aa14.09□□□□□ -0.15
CD48-201ENST00000368045 CYP20A1Q6UW02 462 aa14.09□□□□□ -0.15
CD48-201ENST00000368045 GOLGA7Q7Z5G4 137 aa14.09□□□□□ -0.15
CD48-201ENST00000368045 OR52B6Q8NGF0 335 aa14.09□□□□□ -0.15
CD48-201ENST00000368045 FBXL20Q96IG2 436 aa14.09□□□□□ -0.15
CD48-201ENST00000368045 B3GALT6Q96L58 329 aa14.09□□□□□ -0.15
CD48-201ENST00000368045 RDH12Q96NR8 316 aa14.09□□□□□ -0.15
CD48-201ENST00000368045 ZBTB18Q99592 522 aa14.09□□□□□ -0.15
CD48-201ENST00000368045 MUC3BQ9H195 1237 aa14.09□□□□□ -0.15
CD48-201ENST00000368045 MAGEE1Q9HCI5 957 aa14.09□□□□□ -0.15
CD48-201ENST00000368045 TMEM9Q9P0T7 183 aa14.09□□□□□ -0.15
CD48-201ENST00000368045 PCDHB7Q9Y5E2 793 aa14.09□□□□□ -0.15
CD48-201ENST00000368045 VWA8A3KMH1 1905 aa14.09□□□□□ -0.15
CD48-201ENST00000368045 ZNF840PA6NDX5 716 aa14.09□□□□□ -0.15
CD48-201ENST00000368045 ANKRD28O15084 1053 aa14.09□□□□□ -0.15
CD48-201ENST00000368045 FZD6O60353 706 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms