RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 ESR1P03372 595 aa14.63□□□□□ -0.07
CCNE1-202ENST00000357943 CELA2BP08218 269 aaPredicted RBP14.63□□□□□ -0.07
CCNE1-202ENST00000357943 OR56A5P0C7T3 313 aa14.63□□□□□ -0.07
CCNE1-202ENST00000357943 PKMP14618 531 aaKnown RBP14.63□□□□□ -0.07
CCNE1-202ENST00000357943 ITGB6P18564 788 aa14.63□□□□□ -0.07
CCNE1-202ENST00000357943 PBLDP30039 288 aaPredicted RBP14.63□□□□□ -0.07
CCNE1-202ENST00000357943 GP5P40197 560 aa14.63□□□□□ -0.07
CCNE1-202ENST00000357943 RXRGP48443 463 aa14.63□□□□□ -0.07
CCNE1-202ENST00000357943 HNRNPKP61978 463 aaKnown RBP eCLIP14.63□□□□□ -0.07
CCNE1-202ENST00000357943 IL9RQ01113 521 aa14.63□□□□□ -0.07
CCNE1-202ENST00000357943 BNIP3Q12983 259 aa14.63□□□□□ -0.07
CCNE1-202ENST00000357943 C1orf61Q13536 156 aa14.63□□□□□ -0.07
CCNE1-202ENST00000357943 KLHL38Q2WGJ6 581 aa14.63□□□□□ -0.07
CCNE1-202ENST00000357943 PRRT3Q5FWE3 981 aa14.63□□□□□ -0.07
CCNE1-202ENST00000357943 BEND6Q5SZJ8 279 aaPredicted RBP14.63□□□□□ -0.07
CCNE1-202ENST00000357943 RBM20Q5T481 1227 aaKnown RBP14.63□□□□□ -0.07
CCNE1-202ENST00000357943 IL27RAQ6UWB1 636 aa14.63□□□□□ -0.07
CCNE1-202ENST00000357943 ASCL5Q7RTU5 278 aa14.63□□□□□ -0.07
CCNE1-202ENST00000357943 KRT222Q8N1A0 295 aa14.63□□□□□ -0.07
CCNE1-202ENST00000357943 ACVR1CQ8NER5 493 aa14.63□□□□□ -0.07
CCNE1-202ENST00000357943 FAM136AQ96C01 138 aa14.63□□□□□ -0.07
CCNE1-202ENST00000357943 PAFAH2Q99487 392 aa14.63□□□□□ -0.07
CCNE1-202ENST00000357943 RXFP3Q9NSD7 469 aa14.63□□□□□ -0.07
CCNE1-202ENST00000357943 TRNAU1APQ9NX07 287 aaKnown RBP14.63□□□□□ -0.07
CCNE1-202ENST00000357943 DNAJC16Q9Y2G8 782 aa14.63□□□□□ -0.07
CCNE1-202ENST00000357943 MED16Q9Y2X0 877 aa14.63□□□□□ -0.07
CCNE1-202ENST00000357943 PCDHB1Q9Y5F3 818 aa14.63□□□□□ -0.07
CCNE1-202ENST00000357943 QSOX1O00391 747 aa14.63□□□□□ -0.07
CCNE1-202ENST00000357943 TRIM16O95361 564 aa14.63□□□□□ -0.07
CCNE1-202ENST00000357943 CTSEP14091 401 aa14.63□□□□□ -0.07
CCNE1-202ENST00000357943 TGM1P22735 817 aa14.63□□□□□ -0.07
CCNE1-202ENST00000357943 AK4P27144 223 aaPredicted RBP14.63□□□□□ -0.07
CCNE1-202ENST00000357943 GCAP28676 217 aa14.63□□□□□ -0.07
CCNE1-202ENST00000357943 ARRB1P49407 418 aaPredicted RBP14.63□□□□□ -0.07
CCNE1-202ENST00000357943 CTBSQ01459 385 aa14.63□□□□□ -0.07
CCNE1-202ENST00000357943 NAB1Q13506 487 aa14.63□□□□□ -0.07
CCNE1-202ENST00000357943 INSCQ1MX18 579 aa14.63□□□□□ -0.07
CCNE1-202ENST00000357943 NAPRTQ6XQN6 538 aa14.63□□□□□ -0.07
CCNE1-202ENST00000357943 SPNS2Q8IVW8 549 aa14.63□□□□□ -0.07
CCNE1-202ENST00000357943 OXR1Q8N573 874 aa14.63□□□□□ -0.07
CCNE1-202ENST00000357943 GPATCH11Q8N954 259 aa14.63□□□□□ -0.07
CCNE1-202ENST00000357943 OR2W6PQ8NHA6 318 aa14.63□□□□□ -0.07
CCNE1-202ENST00000357943 SLC44A1Q8WWI5 657 aa14.63□□□□□ -0.07
CCNE1-202ENST00000357943 LINC00615Q96LM1 132 aaPredicted RBP14.63□□□□□ -0.07
CCNE1-202ENST00000357943 RBBP8Q99708 897 aa14.63□□□□□ -0.07
CCNE1-202ENST00000357943 AARSD1Q9BTE6 412 aaKnown RBP14.63□□□□□ -0.07
CCNE1-202ENST00000357943 CCDC68Q9H2F9 335 aa14.63□□□□□ -0.07
CCNE1-202ENST00000357943 RHOJQ9H4E5 214 aa14.63□□□□□ -0.07
CCNE1-202ENST00000357943 GALPQ9UBC7 116 aa14.63□□□□□ -0.07
CCNE1-202ENST00000357943 FAM8A1Q9UBU6 413 aa14.63□□□□□ -0.07
CCNE1-202ENST00000357943 KCNK6Q9Y257 313 aa14.63□□□□□ -0.07
CCNE1-202ENST00000357943 LRP4O75096 1905 aa14.62□□□□□ -0.07
CCNE1-202ENST00000357943 A0A1B0GTQ1 180 aa14.62□□□□□ -0.07
CCNE1-202ENST00000357943 H3BM21 787 aa14.62□□□□□ -0.07
CCNE1-202ENST00000357943 LRP3O75074 770 aa14.62□□□□□ -0.07
CCNE1-202ENST00000357943 PIAS2O75928 621 aa14.62□□□□□ -0.07
CCNE1-202ENST00000357943 CHRM3P20309 590 aa14.62□□□□□ -0.07
CCNE1-202ENST00000357943 PGGT1BP53609 377 aa14.62□□□□□ -0.07
CCNE1-202ENST00000357943 ATXN3P54252 364 aaPredicted RBP14.62□□□□□ -0.07
CCNE1-202ENST00000357943 CSE1LP55060 971 aaKnown RBP14.62□□□□□ -0.07
CCNE1-202ENST00000357943 NFE2L1Q14494 772 aa14.62□□□□□ -0.07
CCNE1-202ENST00000357943 CSRP2Q16527 193 aa14.62□□□□□ -0.07
CCNE1-202ENST00000357943 GRTP1Q5TC63 336 aa14.62□□□□□ -0.07
CCNE1-202ENST00000357943 XKR5Q6UX68 686 aa14.62□□□□□ -0.07
CCNE1-202ENST00000357943 AMZ2Q86W34 360 aa14.62□□□□□ -0.07
CCNE1-202ENST00000357943 NRROSQ86YC3 692 aa14.62□□□□□ -0.07
CCNE1-202ENST00000357943 MINDY1Q8N5J2 469 aa14.62□□□□□ -0.07
CCNE1-202ENST00000357943 LILRA3Q8N6C8 439 aaPredicted RBP14.62□□□□□ -0.07
CCNE1-202ENST00000357943 ZNF548Q8NEK5 533 aaPredicted RBP14.62□□□□□ -0.07
CCNE1-202ENST00000357943 OR2L2Q8NH16 312 aa14.62□□□□□ -0.07
CCNE1-202ENST00000357943 GPBAR1Q8TDU6 330 aa14.62□□□□□ -0.07
CCNE1-202ENST00000357943 LMX1AQ8TE12 382 aa14.62□□□□□ -0.07
CCNE1-202ENST00000357943 VPS39Q96JC1 886 aa14.62□□□□□ -0.07
CCNE1-202ENST00000357943 TIMM29Q9BSF4 260 aa14.62□□□□□ -0.07
CCNE1-202ENST00000357943 CCM2Q9BSQ5 444 aa14.62□□□□□ -0.07
CCNE1-202ENST00000357943 KLC4Q9NSK0 619 aa14.62□□□□□ -0.07
CCNE1-202ENST00000357943 UCKL1Q9NWZ5 548 aa14.62□□□□□ -0.07
CCNE1-202ENST00000357943 DNMT3AQ9Y6K1 912 aaPredicted RBP14.62□□□□□ -0.07
CCNE1-202ENST00000357943 ADAMTS9Q9P2N4 1935 aa14.61□□□□□ -0.07
CCNE1-202ENST00000357943 CER1O95813 267 aa14.61□□□□□ -0.07
CCNE1-202ENST00000357943 FTH1P02794 183 aa14.61□□□□□ -0.07
CCNE1-202ENST00000357943 INHBAP08476 426 aa14.61□□□□□ -0.07
CCNE1-202ENST00000357943 NUDT17P0C025 328 aa14.61□□□□□ -0.07
CCNE1-202ENST00000357943 DGKAP23743 735 aa14.61□□□□□ -0.07
CCNE1-202ENST00000357943 EPHA8P29322 1005 aaPredicted RBP14.61□□□□□ -0.07
CCNE1-202ENST00000357943 CCR7P32248 378 aa14.61□□□□□ -0.07
CCNE1-202ENST00000357943 MSH2P43246 934 aa14.61□□□□□ -0.07
CCNE1-202ENST00000357943 LIMK2P53671 638 aa14.61□□□□□ -0.07
CCNE1-202ENST00000357943 CDKN2DP55273 166 aa14.61□□□□□ -0.07
CCNE1-202ENST00000357943 ARHGAP8P85298 464 aa14.61□□□□□ -0.07
CCNE1-202ENST00000357943 TIAL1Q01085 375 aaKnown RBP eCLIP14.61□□□□□ -0.07
CCNE1-202ENST00000357943 LRP8Q14114 963 aa14.61□□□□□ -0.07
CCNE1-202ENST00000357943 ZNF658BQ4V348 819 aaPredicted RBP14.61□□□□□ -0.07
CCNE1-202ENST00000357943 HECTD2Q5U5R9 776 aa14.61□□□□□ -0.07
CCNE1-202ENST00000357943 SLC30A9Q6PML9 568 aa14.61□□□□□ -0.07
CCNE1-202ENST00000357943 FAM83HQ6ZRV2 1179 aaPredicted RBP14.61□□□□□ -0.07
CCNE1-202ENST00000357943 ELMO1Q92556 727 aa14.61□□□□□ -0.07
CCNE1-202ENST00000357943 KCNJ9Q92806 393 aa14.61□□□□□ -0.07
CCNE1-202ENST00000357943 DHRS4Q9BTZ2 278 aa14.61□□□□□ -0.07
CCNE1-202ENST00000357943 SPASTQ9UBP0 616 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms