RNA–Protein interactions for RNA: ENST00000348547.6

ERGIC3-202, Transcript of ERGIC and golgi 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ERGIC3, Length 1,359 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-202ENST00000348547 RHOJQ9H4E5 214 aa12.53□□□□□ -0.4
ERGIC3-202ENST00000348547 CARS2Q9HA77 564 aaKnown RBP12.53□□□□□ -0.4
ERGIC3-202ENST00000348547 DNAJC28Q9NX36 388 aa12.53□□□□□ -0.4
ERGIC3-202ENST00000348547 PCDHGA5Q9Y5G8 931 aa12.53□□□□□ -0.4
ERGIC3-202ENST00000348547 ANKRD12Q6UB98 2062 aa12.52□□□□□ -0.4
ERGIC3-202ENST00000348547 A6NCN8 305 aa12.52□□□□□ -0.41
ERGIC3-202ENST00000348547 POC1B-GALNT4F8VUJ3 575 aa12.52□□□□□ -0.41
ERGIC3-202ENST00000348547 GRID2O43424 1007 aa12.52□□□□□ -0.41
ERGIC3-202ENST00000348547 ALDOAP04075 364 aaKnown RBP12.52□□□□□ -0.41
ERGIC3-202ENST00000348547 ACP5P13686 325 aa12.52□□□□□ -0.41
ERGIC3-202ENST00000348547 PKMP14618 531 aaKnown RBP12.52□□□□□ -0.41
ERGIC3-202ENST00000348547 ENGP17813 658 aa12.52□□□□□ -0.41
ERGIC3-202ENST00000348547 FDXRP22570 491 aa12.52□□□□□ -0.41
ERGIC3-202ENST00000348547 PMLP29590 882 aa12.52□□□□□ -0.41
ERGIC3-202ENST00000348547 PBLDP30039 288 aaPredicted RBP12.52□□□□□ -0.41
ERGIC3-202ENST00000348547 GP5P40197 560 aa12.52□□□□□ -0.41
ERGIC3-202ENST00000348547 SLCO1A2P46721 670 aa12.52□□□□□ -0.41
ERGIC3-202ENST00000348547 PREPP48147 710 aa12.52□□□□□ -0.41
ERGIC3-202ENST00000348547 CD151P48509 253 aa12.52□□□□□ -0.41
ERGIC3-202ENST00000348547 LIMK2P53671 638 aa12.52□□□□□ -0.41
ERGIC3-202ENST00000348547 CTBSQ01459 385 aa12.52□□□□□ -0.41
ERGIC3-202ENST00000348547 ZNF844Q08AG5 666 aa12.52□□□□□ -0.41
ERGIC3-202ENST00000348547 SPEM2Q0P670 501 aa12.52□□□□□ -0.41
ERGIC3-202ENST00000348547 BNIP3Q12983 259 aa12.52□□□□□ -0.41
ERGIC3-202ENST00000348547 C1orf61Q13536 156 aa12.52□□□□□ -0.41
ERGIC3-202ENST00000348547 NFE2L1Q14494 772 aa12.52□□□□□ -0.41
ERGIC3-202ENST00000348547 GBX1Q14549 363 aa12.52□□□□□ -0.41
ERGIC3-202ENST00000348547 HLA-BQ31612 363 aa12.52□□□□□ -0.41
ERGIC3-202ENST00000348547 LYPLAL1Q5VWZ2 237 aa12.52□□□□□ -0.41
ERGIC3-202ENST00000348547 SDCCAG8Q86SQ7 713 aaPredicted RBP12.52□□□□□ -0.41
ERGIC3-202ENST00000348547 SLC25A45Q8N413 288 aa12.52□□□□□ -0.41
ERGIC3-202ENST00000348547 ZNF548Q8NEK5 533 aaPredicted RBP12.52□□□□□ -0.41
ERGIC3-202ENST00000348547 CALML6Q8TD86 181 aa12.52□□□□□ -0.41
ERGIC3-202ENST00000348547 SCG3Q8WXD2 468 aaKnown RBP12.52□□□□□ -0.41
ERGIC3-202ENST00000348547 ANKRD7Q92527 254 aa12.52□□□□□ -0.41
ERGIC3-202ENST00000348547 OR2M4Q96R27 311 aa12.52□□□□□ -0.41
ERGIC3-202ENST00000348547 GPR22Q99680 433 aa12.52□□□□□ -0.41
ERGIC3-202ENST00000348547 CPNE1Q99829 537 aa12.52□□□□□ -0.41
ERGIC3-202ENST00000348547 ERVMER34-1Q9H9K5 563 aa12.52□□□□□ -0.41
ERGIC3-202ENST00000348547 FAM8A1Q9UBU6 413 aa12.52□□□□□ -0.41
ERGIC3-202ENST00000348547 SUSD2Q9UGT4 822 aa12.52□□□□□ -0.41
ERGIC3-202ENST00000348547 ZNHIT2Q9UHR6 403 aa12.52□□□□□ -0.41
ERGIC3-202ENST00000348547 IKZF3Q9UKT9 509 aa12.52□□□□□ -0.41
ERGIC3-202ENST00000348547 SLC6A14Q9UN76 642 aa12.52□□□□□ -0.41
ERGIC3-202ENST00000348547 KCNK6Q9Y257 313 aa12.52□□□□□ -0.41
ERGIC3-202ENST00000348547 PLAAQ9Y263 795 aa12.52□□□□□ -0.41
ERGIC3-202ENST00000348547 EXOC1LA0A1B0GW35 172 aa12.51□□□□□ -0.41
ERGIC3-202ENST00000348547 PRR5-ARHGAP8B1AHC4 643 aa12.51□□□□□ -0.41
ERGIC3-202ENST00000348547 ARHGAP33O14559 1287 aa12.51□□□□□ -0.41
ERGIC3-202ENST00000348547 TCEA3O75764 348 aa12.51□□□□□ -0.41
ERGIC3-202ENST00000348547 POP7O75817 140 aaKnown RBP12.51□□□□□ -0.41
ERGIC3-202ENST00000348547 AP2A2O94973 939 aa12.51□□□□□ -0.41
ERGIC3-202ENST00000348547 RASGRP1O95267 797 aa12.51□□□□□ -0.41
ERGIC3-202ENST00000348547 TSPAN12O95859 305 aa12.51□□□□□ -0.41
ERGIC3-202ENST00000348547 TOP3BO95985 862 aaKnown RBP12.51□□□□□ -0.41
ERGIC3-202ENST00000348547 ESR1P03372 595 aa12.51□□□□□ -0.41
ERGIC3-202ENST00000348547 BRAFP15056 766 aa12.51□□□□□ -0.41
ERGIC3-202ENST00000348547 GNSP15586 552 aa12.51□□□□□ -0.41
ERGIC3-202ENST00000348547 ZNF7P17097 686 aaPredicted RBP12.51□□□□□ -0.41
ERGIC3-202ENST00000348547 JUNDP17535 347 aa12.51□□□□□ -0.41
ERGIC3-202ENST00000348547 PDHA2P29803 388 aa12.51□□□□□ -0.41
ERGIC3-202ENST00000348547 PHBP35232 272 aa12.51□□□□□ -0.41
ERGIC3-202ENST00000348547 RXRGP48443 463 aa12.51□□□□□ -0.41
ERGIC3-202ENST00000348547 CSE1LP55060 971 aaKnown RBP12.51□□□□□ -0.41
ERGIC3-202ENST00000348547 C21orf59P57076 290 aa12.51□□□□□ -0.41
ERGIC3-202ENST00000348547 NAB1Q13506 487 aa12.51□□□□□ -0.41
ERGIC3-202ENST00000348547 RNF187Q5TA31 235 aaPredicted RBP12.51□□□□□ -0.41
ERGIC3-202ENST00000348547 HECTD2Q5U5R9 776 aa12.51□□□□□ -0.41
ERGIC3-202ENST00000348547 CMC1Q7Z7K0 106 aa12.51□□□□□ -0.41
ERGIC3-202ENST00000348547 LRRTM4Q86VH4 590 aa12.51□□□□□ -0.41
ERGIC3-202ENST00000348547 DCP2Q8IU60 420 aaKnown RBP12.51□□□□□ -0.41
ERGIC3-202ENST00000348547 GALNT13Q8IUC8 556 aa12.51□□□□□ -0.41
ERGIC3-202ENST00000348547 SIDT2Q8NBJ9 832 aaKnown RBP12.51□□□□□ -0.41
ERGIC3-202ENST00000348547 SPDYE1Q8NFV5 336 aaPredicted RBP12.51□□□□□ -0.41
ERGIC3-202ENST00000348547 FAM174AQ8TBP5 190 aa12.51□□□□□ -0.41
ERGIC3-202ENST00000348547 CD200R1Q8TD46 325 aa12.51□□□□□ -0.41
ERGIC3-202ENST00000348547 GPBAR1Q8TDU6 330 aa12.51□□□□□ -0.41
ERGIC3-202ENST00000348547 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.51□□□□□ -0.41
ERGIC3-202ENST00000348547 DCUN1D1Q96GG9 259 aa12.51□□□□□ -0.41
ERGIC3-202ENST00000348547 LINC00615Q96LM1 132 aaPredicted RBP12.51□□□□□ -0.41
ERGIC3-202ENST00000348547 ZIM3Q96PE6 472 aa12.51□□□□□ -0.41
ERGIC3-202ENST00000348547 ELF4Q99607 663 aaPredicted RBP12.51□□□□□ -0.41
ERGIC3-202ENST00000348547 GPR21Q99679 349 aa12.51□□□□□ -0.41
ERGIC3-202ENST00000348547 SPATS2LQ9NUQ6 558 aaKnown RBP12.51□□□□□ -0.41
ERGIC3-202ENST00000348547 SCHIP1Q9P0W5 487 aaPredicted RBP12.51□□□□□ -0.41
ERGIC3-202ENST00000348547 TBC1D29Q9UFV1 150 aa12.51□□□□□ -0.41
ERGIC3-202ENST00000348547 APOBEC3BQ9UH17 382 aaKnown RBP12.51□□□□□ -0.41
ERGIC3-202ENST00000348547 MOSPD1Q9UJG1 213 aa12.51□□□□□ -0.41
ERGIC3-202ENST00000348547 DNAJC16Q9Y2G8 782 aa12.51□□□□□ -0.41
ERGIC3-202ENST00000348547 WDR37Q9Y2I8 494 aa12.51□□□□□ -0.41
ERGIC3-202ENST00000348547 RP1P56715 2156 aa12.5□□□□□ -0.41
ERGIC3-202ENST00000348547 PRAMEF33A0A0G2JMD5 474 aa12.5□□□□□ -0.41
ERGIC3-202ENST00000348547 A0A1B0GTQ1 180 aa12.5□□□□□ -0.41
ERGIC3-202ENST00000348547 FAM95CA0A1B0GW59 222 aa12.5□□□□□ -0.41
ERGIC3-202ENST00000348547 SLC5A10A0PJK1 596 aa12.5□□□□□ -0.41
ERGIC3-202ENST00000348547 KRT87PA6NCN2 255 aa12.5□□□□□ -0.41
ERGIC3-202ENST00000348547 GPR89AB7ZAQ6 455 aa12.5□□□□□ -0.41
ERGIC3-202ENST00000348547 CDX4O14627 284 aaPredicted RBP12.5□□□□□ -0.41
ERGIC3-202ENST00000348547 PHGDHO43175 533 aaKnown RBP12.5□□□□□ -0.41
ERGIC3-202ENST00000348547 PIAS2O75928 621 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms